Basic Information

Insect: Labia minor
Gene Symbol: -
Assembly: GCA_963082975.1
Location: OY720347.1:21782788-21784338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.5e-09 1.2e-06 29.7 2.0 1 23 16 38 16 38 0.98

2 15 0.008 1.3 10.7 5.6 2 23 46 67 45 68 0.94

3 15 0.0041 0.65 11.6 4.6 1 23 72 94 72 94 0.89

4 15 0.0023 0.36 12.4 0.3 3 23 102 123 101 123 0.95

5 15 2.1e-06 0.00033 22.0 2.2 1 23 132 154 132 154 0.99

6 15 0.00029 0.046 15.2 0.7 3 23 163 183 161 184 0.93

7 15 0.44 70 5.2 1.1 1 23 188 210 188 210 0.85

8 15 4.4e-06 0.00069 21.0 0.8 2 23 215 236 214 236 0.96

9 15 0.0025 0.4 12.3 1.6 2 23 240 261 239 261 0.97

10 15 3.5e-06 0.00054 21.3 0.3 1 23 268 290 268 290 0.98

11 15 0.00024 0.038 15.5 0.2 2 23 297 318 296 318 0.97

12 15 1.9e-05 0.003 19.0 1.4 1 23 324 346 324 346 0.96

13 15 0.00017 0.027 16.0 2.8 1 23 352 375 352 375 0.98

14 15 7.2e-07 0.00011 23.5 0.4 1 23 381 403 381 403 0.98

15 15 0.0009 0.14 13.7 0.6 1 23 409 432 409 432 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.5e-09	1.2e-06	29.7	2.0	1	23	16	38	16	38	0.98
2	15	0.008	1.3	10.7	5.6	2	23	46	67	45	68	0.94
3	15	0.0041	0.65	11.6	4.6	1	23	72	94	72	94	0.89
4	15	0.0023	0.36	12.4	0.3	3	23	102	123	101	123	0.95
5	15	2.1e-06	0.00033	22.0	2.2	1	23	132	154	132	154	0.99
6	15	0.00029	0.046	15.2	0.7	3	23	163	183	161	184	0.93
7	15	0.44	70	5.2	1.1	1	23	188	210	188	210	0.85
8	15	4.4e-06	0.00069	21.0	0.8	2	23	215	236	214	236	0.96
9	15	0.0025	0.4	12.3	1.6	2	23	240	261	239	261	0.97
10	15	3.5e-06	0.00054	21.3	0.3	1	23	268	290	268	290	0.98
11	15	0.00024	0.038	15.5	0.2	2	23	297	318	296	318	0.97
12	15	1.9e-05	0.003	19.0	1.4	1	23	324	346	324	346	0.96
13	15	0.00017	0.027	16.0	2.8	1	23	352	375	352	375	0.98
14	15	7.2e-07	0.00011	23.5	0.4	1	23	381	403	381	403	0.98
15	15	0.0009	0.14	13.7	0.6	1	23	409	432	409	432	0.95

Sequence Information

Coding Sequence: ATGAAGAGACATTGCAAAACTCATTTAGCATTAGAAACTAAAATGTTTGAATGTAAAATATGCGAAAAAGTTTTTACTACACAAAGTAACTTGAAAAGACATCTGAAAAATCATGAAAATAGCCCTGGTAAAGTTTCttgtaatatttgttcaaaagaattgactgataaattacatttaaaacatCATTTAGATAAACATCATCCTGAATTCTATCgctgtaattattgtcaaaagactttttcaaataaaagaggATGTAAATTACATGAACTATTGCATGAATCGGACACATCTGTTTTCTGTCCTTTTTGTGATTTGGTATTTAAAACAGAAGTACGCCTATCAAACCACATTGATTCAACACATAAATTTGGGAATCAATCTAAGATTTATACGTGCCCATATTGTAATCGTACGATAACtacattaactaattttaaacgGCATATACGTAATCATGATCCAAATGCTCTGACTGATATTTGTTCTATTTGTAATCAGTCTTTTTCTGATGATTTAACATTACGGAAACATATAGAAGAACATCATCCGaatatatatccttgttctttaTGTGATTTGATTTTTGAAACTCGAAAATTATGTGATGAACATGAATCAACCCACCCTGAACAAATAAAATGTGAAGAATGTGAACAAACATTTTCAACAAATCAACAATTGAAAAAACATACAATAATTCATCGCGattcaaaatgtaaatattgtaataaagttATTGAagataaaactaaattatatgaTCATGAGAAACGTCACGAAAAATTTAAAGAGGGATTTAAGTGTGAATTCTGCCCGAAAGAATTTGGAACACCTTCAGGATTAAAATATCACATGTCTATTCATACAGGGAAGTATAATGTTTATTGTGAAATTTGTGGGAAAGGATTCCATTCTGAAATTACTTTGGAAGAACATCGGGCAACACATACTAAAGAAATACGGTTTATGTGTGAATTATGtggaagaaaattttcttctaatagtACATATAGAATGCATCGACTATGGCATGATAATCCACTTCCCTATACATGTAATAtatgcaataaaaaatttaagcaTACATCCATACTTGCTGTTCATAAAAGGCGCGCTCATACTGGAGAAAGACCTTACAAATGTCCTTATTGTAGCCAAGCCTTTAGTGTTAGTagtactttaaataaacatattatcttACATACAAGACAATATCCATTCAATTGTGAAGTGTGTAAAAAGGGTTTTACTACACGATTGAAAATTGCGAAACATATGGTTAAAGCTCATAATGATCATACCCTTATGAATTCTCAAcgtaaaaattgtgaatataaAATGGCACTTAAACCTAGTGAAATTTCAAACTCAAAtgataattcattaaatgatgAAACAATGATTCTTGGAACGGAACCAATTCAGGGGGATGTGACACTTCTAGATAGTGCTCTCTCTATATCAGTTGGTGAAGAAGAAGTTGAAAATCAAGTAGCTGTACAAACTATTGATCCTGTGGTttctgattatattatatttgaataa
Protein Sequence: MKRHCKTHLALETKMFECKICEKVFTTQSNLKRHLKNHENSPGKVSCNICSKELTDKLHLKHHLDKHHPEFYRCNYCQKTFSNKRGCKLHELLHESDTSVFCPFCDLVFKTEVRLSNHIDSTHKFGNQSKIYTCPYCNRTITTLTNFKRHIRNHDPNALTDICSICNQSFSDDLTLRKHIEEHHPNIYPCSLCDLIFETRKLCDEHESTHPEQIKCEECEQTFSTNQQLKKHTIIHRDSKCKYCNKVIEDKTKLYDHEKRHEKFKEGFKCEFCPKEFGTPSGLKYHMSIHTGKYNVYCEICGKGFHSEITLEEHRATHTKEIRFMCELCGRKFSSNSTYRMHRLWHDNPLPYTCNICNKKFKHTSILAVHKRRAHTGERPYKCPYCSQAFSVSSTLNKHIILHTRQYPFNCEVCKKGFTTRLKIAKHMVKAHNDHTLMNSQRKNCEYKMALKPSEISNSNDNSLNDETMILGTEPIQGDVTLLDSALSISVGEEEVENQVAVQTIDPVVSDYIIFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00850021;
90% Identity: iTF_00850021;
80% Identity: iTF_00850021;