Lmin020125.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- -
- Assembly
- GCA_963082975.1
- Location
- OY720347.1:21782788-21784338[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.7e-06 0.0084 17.2 2.0 13 40 12 36 3 41 0.87 2 13 0.00068 3.3 8.9 5.0 15 44 43 69 37 69 0.88 3 13 0.00087 4.2 8.5 3.0 17 31 72 86 70 94 0.86 4 13 0.14 7e+02 1.4 0.4 13 44 96 124 87 124 0.81 5 13 0.00028 1.3 10.1 3.8 13 40 128 152 122 155 0.87 6 13 0.022 1e+02 4.1 0.1 18 44 162 185 161 185 0.90 7 13 0.3 1.4e+03 0.4 0.3 16 28 213 225 205 234 0.79 8 13 0.0065 31 5.7 2.7 13 29 235 251 227 257 0.77 9 13 0.018 88 4.3 0.3 2 39 253 287 252 291 0.81 10 13 0.011 54 5.0 1.2 6 27 286 306 281 317 0.78 11 13 0.0075 36 5.5 0.6 13 35 320 341 313 346 0.77 12 13 0.0035 17 6.6 2.7 18 43 353 375 351 376 0.87 13 13 0.91 4.4e+03 -1.1 4.7 18 39 382 400 378 433 0.77
Sequence Information
- Coding Sequence
- ATGAAGAGACATTGCAAAACTCATTTAGCATTAGAAACTAAAATGTTTGAATGTAAAATATGCGAAAAAGTTTTTACTACACAAAGTAACTTGAAAAGACATCTGAAAAATCATGAAAATAGCCCTGGTAAAGTTTCttgtaatatttgttcaaaagaattgactgataaattacatttaaaacatCATTTAGATAAACATCATCCTGAATTCTATCgctgtaattattgtcaaaagactttttcaaataaaagaggATGTAAATTACATGAACTATTGCATGAATCGGACACATCTGTTTTCTGTCCTTTTTGTGATTTGGTATTTAAAACAGAAGTACGCCTATCAAACCACATTGATTCAACACATAAATTTGGGAATCAATCTAAGATTTATACGTGCCCATATTGTAATCGTACGATAACtacattaactaattttaaacgGCATATACGTAATCATGATCCAAATGCTCTGACTGATATTTGTTCTATTTGTAATCAGTCTTTTTCTGATGATTTAACATTACGGAAACATATAGAAGAACATCATCCGaatatatatccttgttctttaTGTGATTTGATTTTTGAAACTCGAAAATTATGTGATGAACATGAATCAACCCACCCTGAACAAATAAAATGTGAAGAATGTGAACAAACATTTTCAACAAATCAACAATTGAAAAAACATACAATAATTCATCGCGattcaaaatgtaaatattgtaataaagttATTGAagataaaactaaattatatgaTCATGAGAAACGTCACGAAAAATTTAAAGAGGGATTTAAGTGTGAATTCTGCCCGAAAGAATTTGGAACACCTTCAGGATTAAAATATCACATGTCTATTCATACAGGGAAGTATAATGTTTATTGTGAAATTTGTGGGAAAGGATTCCATTCTGAAATTACTTTGGAAGAACATCGGGCAACACATACTAAAGAAATACGGTTTATGTGTGAATTATGtggaagaaaattttcttctaatagtACATATAGAATGCATCGACTATGGCATGATAATCCACTTCCCTATACATGTAATAtatgcaataaaaaatttaagcaTACATCCATACTTGCTGTTCATAAAAGGCGCGCTCATACTGGAGAAAGACCTTACAAATGTCCTTATTGTAGCCAAGCCTTTAGTGTTAGTagtactttaaataaacatattatcttACATACAAGACAATATCCATTCAATTGTGAAGTGTGTAAAAAGGGTTTTACTACACGATTGAAAATTGCGAAACATATGGTTAAAGCTCATAATGATCATACCCTTATGAATTCTCAAcgtaaaaattgtgaatataaAATGGCACTTAAACCTAGTGAAATTTCAAACTCAAAtgataattcattaaatgatgAAACAATGATTCTTGGAACGGAACCAATTCAGGGGGATGTGACACTTCTAGATAGTGCTCTCTCTATATCAGTTGGTGAAGAAGAAGTTGAAAATCAAGTAGCTGTACAAACTATTGATCCTGTGGTttctgattatattatatttgaataa
- Protein Sequence
- MKRHCKTHLALETKMFECKICEKVFTTQSNLKRHLKNHENSPGKVSCNICSKELTDKLHLKHHLDKHHPEFYRCNYCQKTFSNKRGCKLHELLHESDTSVFCPFCDLVFKTEVRLSNHIDSTHKFGNQSKIYTCPYCNRTITTLTNFKRHIRNHDPNALTDICSICNQSFSDDLTLRKHIEEHHPNIYPCSLCDLIFETRKLCDEHESTHPEQIKCEECEQTFSTNQQLKKHTIIHRDSKCKYCNKVIEDKTKLYDHEKRHEKFKEGFKCEFCPKEFGTPSGLKYHMSIHTGKYNVYCEICGKGFHSEITLEEHRATHTKEIRFMCELCGRKFSSNSTYRMHRLWHDNPLPYTCNICNKKFKHTSILAVHKRRAHTGERPYKCPYCSQAFSVSSTLNKHIILHTRQYPFNCEVCKKGFTTRLKIAKHMVKAHNDHTLMNSQRKNCEYKMALKPSEISNSNDNSLNDETMILGTEPIQGDVTLLDSALSISVGEEEVENQVAVQTIDPVVSDYIIFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00850028;
- 90% Identity
- iTF_00850028;
- 80% Identity
- iTF_00850028;