Lmin015513.1
Basic Information
- Insect
- Labia minor
- Gene Symbol
- bab1
- Assembly
- GCA_963082975.1
- Location
- OY720346.1:29606839-29619543[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-18 6.5e-15 55.6 0.0 1 43 28 71 28 73 0.95
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGTTGGAACACTAACCAAAGTCTGGTGCATAATCTTCGATTTCGTGAGCGTGGCCCACTTAAATCATGGAGACCTGAGACAATGGCGGAAGCCATCTTTAGCGTACTAAAAGAGGGCCTCTCGTTATCACAAGCAGCACGCAAATATGACATACCATATCCGACGTTCGTCCTTTACGCCAATCGAGTTCATAATATGCTCGGCCCATCAGCGGATGGTGGTGCAGATCTGCGGCCGAAGGGGCGCGGACGGCCGCAGCGGATTCTGCTCGGTTCCTGGCCCGAGGAGCACATTCGTGGCGTGATCCGCACTGTCGTCTTCCGCGACTCGCACCAGATCAAGGACGAACCGGCGATCCTCGGCTACCCCCGGCTGCAGGAGAGTAATCTAACGCCTAGTCTATGGAGTACTAATGACTTGGAATACGATGTTAATTCTAATTTAGCGGTGTCGAATTAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGSWPEEHIRGVIRTVVFRDSHQIKDEPAILGYPRLQESNLTPSLWSTNDLEYDVNSNLAVSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01446406;
- 90% Identity
- iTF_00090333; iTF_01480784; iTF_01567747;
- 80% Identity
- -