Kmac002223.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Kuschelorhynchus macadamiae
Gene Symbol
clz9
Assembly
GCA_030620095.1
Location
JAUTXW010000067.1:108497-111247[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-06 0.00014 24.4 0.0 1 35 5 40 5 47 0.90

Sequence Information

Coding Sequence
ATGGATAAATATGACGAAGAACAACTTAAAAACGCACTAAAATCAGTAAGAGAATATGGAATGCCTGTATCAACTGCCAGTAAGACCTATAATATTCCAAGAACCACTTTAAGGCATAAATTGGCGGGACGAGCCCCCGAAGGTATAGGAAAACGGGGACCAGATTGTCTGTTAGGGTGCGACCTGGAAGAGCAGTTGTGTGAATGGCTAAAAAATTGTGCAAAAGCAGGATTCCCTGTTAACAAAGACGGTCTTCTTTTTTCTGTACAAAAACTTTCTGCAAAAATTTTTACGGAAATTGGCGACAAGGGTCCATATGTTAATAAGCTTCCAGGTAAAACTTGGTATACAAACTTCATGAACAGACATCCAGAGCTATCCTATAAACAAGCCGAGTACCTCAATAAAGCAAGGGCTACAGTGTCCGAAGCAAGGATACGCGAATGGTTTCGACAAACTTACGAACTTTTAGGGGAAGACGTTAGTGTTCTCAACGATCCATCAAGAGTGTGGAACATGGATGAGTCGGCCTTCTATCTCAATTCAACAGGCGGATGTGTTTTAGCAGAAAAAGGAAAACCTGTCTATGGAACATCTGCAAATAGTGATAAGGAAAATATAACTACTCTTATTACTGTTAACGCCAATGGTGATTTTGCACCACcattaactttatacaaattcgaACGAATCCCAAAGGCATATTTCGAAGCTTTACCGACAAATGATTGGGGAATTGGAAAATCAAAAAACGGTTGGATGACAGCTGAGACATTTCTGCAgtattttacaaatgttttttatccatatttagtaaaaaaaaattataattttcctataatagtttttcttgatGGACATTCGTCCCATTTGAGCCTagaattgacaaaattttgtAAAGAGAATAGAATTGTGTTAGTTTGCCTTTACCCGAACTCGACCCACATTCTTCAACCCTTGGATGTATCCTTATTTTACCCCCTAAAAGTTAAATGGAAGAAGGAAGTTAgtctttttaaactaaaatataacggtgccgaattaaaaaaaaattatgttcctGCCCTCCTTCATGAAATAATTTCAAGGGAATCATTCGAATCGGCAATTCAAAATGGATTTCGAGCTTGTGGGCTATTTCCCTTTAACGCGAATAATGTTGAttatagaaaatgcattaaaccGACCACCGAAATATTACAGAAGCCACCAGAACCAGATGTTAtcgttatacaaaataaaaatcaaaaacagaatCATCATTTACAATATATAGAGACAAAAATAAATCATGAAATACTTGAAATGTTTCGAGACTGcagagaaaaaaatgaaattccgAAGAATGCTGAAACTCTTATGTTATTTGACGTATGGAGCAAGATAAAAACTGATCATGAGAACAATGAGTTATGTCTGATTGAAGACATAATTGATTTTCCATTTCCAGAGTTCGAcgaaaataacattaatattgaAGATACATTATTTTCTACCGAGAATGATACTTCAATAAATTCGTCGTTAATAAATGGACAAACAATAGACAAAGACAGACTCAATATAGATACAGAAGCTCTTAGCAATACATCGGAGATCAATCAAATAATATATCAAGACGATCACGAAGTGGATGAAATGAACATGATAAAAGAAAATGAGGATAGCATTAAACAACCCCAACAACATCTGCTTGCAGATAATATAGAAGACATAcaacaaatagcaaaaaaagAAGAGAGAAAGCCACTAAAAGAAGTCATGATAAATGAAGAAGCCAAATTAAGTGAAATAGAAAGAAGTGTAACAGAACAAATCATAGAAGAATCGACAATAAAGATACATGTTCTTGAAAATACAGAACAAAGCAAACTGAAAGCTGAAAGCAAAACAGACCAGGGAGATGAAAATCATAATATAAGTATGGATACAAGTTCAGAGGTTGAAATTATACGAATAAAAGAGcctgaaaatatacaaaataagaaGATTACTATTTTGAGTAATATTCTAATTGTTCCTAAAGTCACACAAACGccactaaaaaataaaagcaacAGAAGGGATCCTTTTATGTCTGTTCTAACTCACGAAATGTACATTAAAAGTCAAGAGGAAAAGCTACAAAAAGCGTTACGAACAGAACAGGAAAAAGAAGAGCGCAAAAGGAAAagagaacaaaagaaaattgaactgagtgaaaaaaaattaaaaaagatacaaaaatccAAGAAAAGTAATGAGGTAACCTTAAATGATGACTTTCTAGAATCTCAAGAAACAGGAAACAATATTAAaagcaacaataaaaaagaagaaggagaaagtaaaattaacaaattaaaacatgAATTTACTATtgacaacaaaaatacaaattttgtgatTGTTAGATATGATGAATGTCTATATCctgaaaaaatcttagaaaaaaaagACGATAAAAACATCATTGTGTCTTCAATGACTAATAGTGGAGCTGACTGGAAATGGCCATCAAAACAGGATATACTGTGCTATCACAAAGACGACATATTGGAGTACATTTGCGAACCAAAACCAAAGAACAAACGAGGAGTTTTTACCGTTCCTGAAATggaaaagtacaaaaaaattttagttcctaagtatattattttgtttaaaaatgttcatatttgtttattttcttgttttacctGTGTTCCTAATAATGTAATAATAGGTAGTAACTTaactttaatgtttttgaatttaccATTTTCGTTTTAA
Protein Sequence
MDKYDEEQLKNALKSVREYGMPVSTASKTYNIPRTTLRHKLAGRAPEGIGKRGPDCLLGCDLEEQLCEWLKNCAKAGFPVNKDGLLFSVQKLSAKIFTEIGDKGPYVNKLPGKTWYTNFMNRHPELSYKQAEYLNKARATVSEARIREWFRQTYELLGEDVSVLNDPSRVWNMDESAFYLNSTGGCVLAEKGKPVYGTSANSDKENITTLITVNANGDFAPPLTLYKFERIPKAYFEALPTNDWGIGKSKNGWMTAETFLQYFTNVFYPYLVKKNYNFPIIVFLDGHSSHLSLELTKFCKENRIVLVCLYPNSTHILQPLDVSLFYPLKVKWKKEVSLFKLKYNGAELKKNYVPALLHEIISRESFESAIQNGFRACGLFPFNANNVDYRKCIKPTTEILQKPPEPDVIVIQNKNQKQNHHLQYIETKINHEILEMFRDCREKNEIPKNAETLMLFDVWSKIKTDHENNELCLIEDIIDFPFPEFDENNINIEDTLFSTENDTSINSSLINGQTIDKDRLNIDTEALSNTSEINQIIYQDDHEVDEMNMIKENEDSIKQPQQHLLADNIEDIQQIAKKEERKPLKEVMINEEAKLSEIERSVTEQIIEESTIKIHVLENTEQSKLKAESKTDQGDENHNISMDTSSEVEIIRIKEPENIQNKKITILSNILIVPKVTQTPLKNKSNRRDPFMSVLTHEMYIKSQEEKLQKALRTEQEKEERKRKREQKKIELSEKKLKKIQKSKKSNEVTLNDDFLESQETGNNIKSNNKKEEGESKINKLKHEFTIDNKNTNFVIVRYDECLYPEKILEKKDDKNIIVSSMTNSGADWKWPSKQDILCYHKDDILEYICEPKPKNKRGVFTVPEMEKYKKILVPKYIILFKNVHICLFSCFTCVPNNVIIGSNLTLMFLNLPFSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00847396; iTF_00847403; iTF_00847405; iTF_00847406; iTF_00847392;
90% Identity
iTF_00847406;
80% Identity
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