Kmac014272.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Kuschelorhynchus macadamiae
Gene Symbol
clz9
Assembly
GCA_030620095.1
Location
JAUTXW010000349.1:239101-241569[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-06 0.00012 24.6 0.0 1 35 5 40 5 47 0.90

Sequence Information

Coding Sequence
ATGGATAAATATGACGAAGAACAACTTAAAAACGCACTAAAATCAGTAAGAGAATATGGAATGCCTGTATCAACTGCCAGTAAGACCTATAATATTCCAAGAACCACTTTAAGGCATAAATTGGCGGGACGAGCCCCCGAAGGTATAGGAAAACGGGGATCAGATTGTCTGTTAGGGTGCGACCTGGAAGAGCAGTTGTGTGAATGGTTAAAAAATTGTGCAAAAGCAGGATTCCCTGTTAACAAAGACGGTCTTCTTTTTTCTGTACAAAAACTTTCTGCAAAAATTTTTACGGAAATTGGCGACAAGGGTCCATATGTTAATAAGCTTCCAGGTAAAACTTGGTATACAAACTTCATGAACAGACATCCAGAGCTATCCTATAAACAAGCCGAGTACCTCAATAAAGCAAGGGCTACAGTGTCCGAAGCAAGGATACGCGAATGGTTTCGACAAACTTACGAACTTTTAGGGGAAGACGTTAGTGTTCTCAACGATCCATCAAGAGTGTGGAACATGGATGAGTCGGCCTTCTATCTCAATCCAACAGGCGGATGTGTTTTAGCAGAAAAAGGAAAACCTGTCTATGGAACATCTGCAAATAGTGATAAGGAAAATATAACTACTCTTATTACTGTTAACGCCAATGGTGATTTTGCACCACcattaactttatacaaattcgaACGAATCCCAAAGGCATATTTCGAAGCTTTACCGACAAATAATTGGGGAATTGGAAAATCAAAAAACGGTTGGATGACAGCTGAGACATTTCTGCAgtattttacaaatgttttttatccatatttagtaaaaaaaaattataattttcctataatagtttttcttgatGGACATTCGTCCCATTTGAGCCTagaattgacaaaattttgtAAAGAGAATAGAATTGTGTTAGTTTGCCTTTACCTGAACTCGACCCACATTCTTCAACCCTTGGATGTATCCTTATTTTACCCCCTAAAAGTTAAATGGAAGAAGGAAGTTAgtctttttaaactaaaatataacggtgccgaattaaaaaaaatgtatgttcctGCCCTCCTTCATGAAATAATTTCAAGGGAATCATTCGAATCGGCAATTCAAAATGGATTTCGAGCTTGTGGGCTATTTCCCTTTAACGCGAATAATGTTGATTATAGCAAATGCATTAAACCGACCACCGAAATATTACAGAAGCCACCAGAACCAGATGTTAtcgttatacaaaataaaaatcaagaacagAATCATCATTTACAATATATAGAGACAAAAATAAATCATGAAATACTTGAAATGTTTCGAGACTGcagagaaaaaaatgaaattccgAAGAATGCTGAAACTCTTATGTTATTTGACGTATGGAGCAAGATAAAAACTGATCATGAGAACAATGAGTTATGTCTGATTGAAGACATAATTGATTTTCCATTTCCAGAGTTCGAcgaaaataacattaatattgaAGATACATTATTTTCTACCGAGAATGATACTTCAATAAATTCGTCGTTAATAAATGGACAAACAATAGACAAAGACAGACTCAATATAGATACAGAAGCTCTTAGCATTACATCGGAGATCAATCAAATAATATATCAAGACGATCACGAAGTGGATGAAATGAACATGATAAAGGAAAATGAGGATAGCATTAAACAACCCCAACAACATCTGCTTGCAGATAATATAGAAGACATAcaacaaatagcaaaaaaagAAGAGACAAAGCCACTAAAAGAAGTCATGATAAATGAAGAAGCCAAATTAAGTGAAATAGAAAGAAGTGTAACAGAACAAATCATAGAAGAATCGACAATAAAGATACATGTTCTTGAAAATACAGAACAAAGCAAACTGAAAGCTGAAAGCAAAACAGACCAGGGAGATGAAAATCATAATATAAGTATGGATACAAGTTCAGAGGTTGAAATTATACGAATAAAAGAGcctgaaaatatacaaaataagaaGATTACTATTTTGAGTAATATTCTAATTGTTCCTAAAGTCACACAAACGccactaaaaaataaaagcaacAGAAGGGATCCTTTTATGTCTGTTCTAACTCACGAAATGTACATTAAAAGTCAAGAGGAAAAGCTACAAAAAGCGTTACGAACAGAACAGGAAAAAGAAGAGCGCAAAAGGAAAagagaacaaaagaaaattgaactaagtgaaaaaaaattaaaaaagatacaaaaatccAAGAAAAGTAATGAGGTAACCTTAAATGATGACTTTCTAGAATCTCAAGAAACAGGAAACGATATTAAaagcaacaataaaaaagaagaaggagaaagtgaaattaacaaattaaaacatgAATTTACTATtgacaacaaaaatacaaattttgtgatTGTTAGATATGATGAATGTCTATATCCTggaaaaatcttagaaaaaaaaaagacgaTGAAAACATCATTGTGTCTTCAATGA
Protein Sequence
MDKYDEEQLKNALKSVREYGMPVSTASKTYNIPRTTLRHKLAGRAPEGIGKRGSDCLLGCDLEEQLCEWLKNCAKAGFPVNKDGLLFSVQKLSAKIFTEIGDKGPYVNKLPGKTWYTNFMNRHPELSYKQAEYLNKARATVSEARIREWFRQTYELLGEDVSVLNDPSRVWNMDESAFYLNPTGGCVLAEKGKPVYGTSANSDKENITTLITVNANGDFAPPLTLYKFERIPKAYFEALPTNNWGIGKSKNGWMTAETFLQYFTNVFYPYLVKKNYNFPIIVFLDGHSSHLSLELTKFCKENRIVLVCLYLNSTHILQPLDVSLFYPLKVKWKKEVSLFKLKYNGAELKKMYVPALLHEIISRESFESAIQNGFRACGLFPFNANNVDYSKCIKPTTEILQKPPEPDVIVIQNKNQEQNHHLQYIETKINHEILEMFRDCREKNEIPKNAETLMLFDVWSKIKTDHENNELCLIEDIIDFPFPEFDENNINIEDTLFSTENDTSINSSLINGQTIDKDRLNIDTEALSITSEINQIIYQDDHEVDEMNMIKENEDSIKQPQQHLLADNIEDIQQIAKKEETKPLKEVMINEEAKLSEIERSVTEQIIEESTIKIHVLENTEQSKLKAESKTDQGDENHNISMDTSSEVEIIRIKEPENIQNKKITILSNILIVPKVTQTPLKNKSNRRDPFMSVLTHEMYIKSQEEKLQKALRTEQEKEERKRKREQKKIELSEKKLKKIQKSKKSNEVTLNDDFLESQETGNDIKSNNKKEEGESEINKLKHEFTIDNKNTNFVIVRYDECLYPGKILEKKKTMKTSLCLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00847416;
90% Identity
iTF_00847406;
80% Identity
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