Kgib029243.1
Basic Information
- Insect
- Kradibia gibbosae
- Gene Symbol
- bab1
- Assembly
- GCA_018907135.1
- Location
- JACCHX010000001.1:45335242-45339730[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-18 1.4e-14 54.3 0.0 1 43 40 83 40 85 0.95 2 2 0.35 1.7e+03 -0.3 0.5 6 15 162 171 157 172 0.85
Sequence Information
- Coding Sequence
- ATGCAACCAGACAGTTATCAGTATCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAATCAGAGCCTCGTGCACAATCTTCGCTTTCGAGAGCGCGGCCCTTTGAAGTCTTGGCGGCCGGAAACGATGGCGGAAGCGATTTTTAGTGTGCTCAAGGAAGGTCTTTCGTTGAGCCAGGCTGCCAGGAAATACGATATCCCGTACCCGACGTTCGTACTCTACGCGAACCGAGTCCACAACATGTTGGGGCCAAGCGCCGACGGCGGAGCCGATCTACGGCCGAAAGGCCGGGGGAGGCCGCAGAGGATCCTCCTCGGGGTCTGGCCGGACGAGCACATCCGGGGCGTCATCCGGGCGGTGGTCTTCCGCGACGGCCACTCGCCCCACATCGTCAAGGAGGAGCCGACGACAATGTATCCGGCCCTGGCCAACTACGGGGCCTGCAACGGACCGGAGGGAGCCGTGAGTCCGAGCGCGGCCGCGGCCGCCGTAGCCGCCGTAGCCCAAGGCCTCCGGCACCAAATCCCGGGCTCGGGCGGGCCCCCCGAGAGCCCCCTGGAGTCGCCCCTGGCCAGTCCCCTGGGCGCCCTCCTGGACCCCTCGGGCCACCTGCCCCCGAGCGTCGAGGTCGGCATCGGCGTCAGCGGCATGACCTACAAGCCCGCGCGCAGCTTCGTCAGTCCCCGGCCGGAGACGCTCTTCCAGGAGGACATATCGGACCTCGTCAAGAGCTCGCACGCGGCCCTCAAGGAGAAGGAGAAGATCGCCGTCAAGCTCGAGCCCCTGACGGACTCGCGATGCGAATAG
- Protein Sequence
- MQPDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQIPGSGGPPESPLESPLASPLGALLDPSGHLPPSVEVGIGVSGMTYKPARSFVSPRPETLFQEDISDLVKSSHAALKEKEKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00713590;
- 90% Identity
- iTF_00143794; iTF_00713590;
- 80% Identity
- -