Kgib016403.1
Basic Information
- Insect
- Kradibia gibbosae
- Gene Symbol
- Su(H)
- Assembly
- GCA_018907135.1
- Location
- JACCHX010000002.1:12723078-12725187[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-61 7.2e-57 191.7 0.0 1 123 194 316 194 316 0.99
Sequence Information
- Coding Sequence
- ATGGCACTGGACATGCGACAGAATCAACGCCTTACCCAGGAGGCCATGAGACACTATTTGTCTGAATGTAAACGTACTCAAGGAAAAGCTGATATGGTTGTTGTTATCTTTCATGCAAAGGTAGCACAAAAATCTTATGGAACTGAGAAGAGATTTTTTTGTCCACCACCATGTGTTTATTTAAGAGGCAATGCTTGGTCAATGAGACAAGAGCAGATGCGGAGAGACGGTGAATCTGAGCAGTCTTCACAGCTTTGTGCATTTATAGGTATTATTGGTAATTCAGATCAAGATGTACAGCAGCTGGATTTAAACAATGAAGAACAATACTGTGCAGCAAAGACTTTATTTATATCGGACTCTGATAAAAGAAAGCATTTCATGCTTTCCATAAAAATGTTTCATGGGAATGGCCATGATATTGGTGTTTTTTTGAGTAATCGCATAAAAGTTATATCTAAACCGTCTAAAAAAAAACAGTCTCTCAAAAATACAGAATTGTGCATAGCTAGTGGAACAACTATAGCCCTCTTTAACCGTTTGCGCTCGCAAACTGTCAGTACACGATATTTACACGTAGATAATGATCATTTTCATGCAAGTTCGACGCAGTGGAGTACCTTCACCATCTATCTATTAGATGACGAAGAAAGTGAAACTGAAGACTTTGAGCCCCAGGATGGCTACATTCACTACAACAATACAGTTAAATTGGTGTGTAAAGATACAGGAATGGCTCTACCTCGATTAATTATACGTAAGGTTGATAAGTCAATGGCAAGTTTGGAAGCCGACGATCCAGTATCACAACTACACAAATGTGCTTTATTTCTAAAGGATACGGACCACATGTATCTATGCTTGTCACAAGAGAAAATCGTCCCATTTAACGCTACACCATCCCCAAAAGAAGTTAATAAGGATATGATAAATGATGGAGCCTGCTGGACGATTATTAGCACCGAGAGAGCTGAGTATACATTTTATGAAGGAATGGGGCCTGTGCATGCACCAGTAACTCCAGTTCCTACAGTCCAATACCTTAACCCTATGGGTAGTGTGGATGTTGCTATGCTAGAACTGAAGGGTGACAATTTTGCACCGAACCTCCAAGTATGGTTCGGTGATATGGAGGCTGAGACGTGGTACCGGACCGAGCAGAGTATGGTATGTGTAGTCCCGGACATAAGCGAATTCCAGGGCAATTGGTCGTGGATAGATCGAGGGACGGAGGTTCCGGTGTCATTGGTGCGAAACGACGGAATTATATATGCGACAGGACTTACATTCAATTACAACTTGGAGTTAGGATTGAGAAAGCGCGCGGCTTTATCGATGACTAGTTCAGCTACACCAGCTATCGCCGATGCGCTTTGGATTCGTCATCATCAGCAGTCACAATTTCCAATAATTTGA
- Protein Sequence
- MALDMRQNQRLTQEAMRHYLSECKRTQGKADMVVVIFHAKVAQKSYGTEKRFFCPPPCVYLRGNAWSMRQEQMRRDGESEQSSQLCAFIGIIGNSDQDVQQLDLNNEEQYCAAKTLFISDSDKRKHFMLSIKMFHGNGHDIGVFLSNRIKVISKPSKKKQSLKNTELCIASGTTIALFNRLRSQTVSTRYLHVDNDHFHASSTQWSTFTIYLLDDEESETEDFEPQDGYIHYNNTVKLVCKDTGMALPRLIIRKVDKSMASLEADDPVSQLHKCALFLKDTDHMYLCLSQEKIVPFNATPSPKEVNKDMINDGACWTIISTERAEYTFYEGMGPVHAPVTPVPTVQYLNPMGSVDVAMLELKGDNFAPNLQVWFGDMEAETWYRTEQSMVCVVPDISEFQGNWSWIDRGTEVPVSLVRNDGIIYATGLTFNYNLELGLRKRAALSMTSSATPAIADALWIRHHQQSQFPII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00738842;
- 90% Identity
- iTF_00304857; iTF_00738842; iTF_00309276; iTF_01467717; iTF_00689929; iTF_00690859; iTF_01468592; iTF_01469424; iTF_01464797; iTF_01465950; iTF_00692672; iTF_01428051; iTF_00286102; iTF_01218850; iTF_01274245; iTF_01035210; iTF_01190091; iTF_01216557; iTF_00286959; iTF_00305425; iTF_00968563; iTF_00304281; iTF_00707609; iTF_00708345; iTF_00143645; iTF_00463774; iTF_00969342; iTF_01523806; iTF_01036791; iTF_01035973; iTF_01486887;
- 80% Identity
- -