Klyc024165.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- -
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000025.1:1982416-1983978[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00065 0.49 11.4 1.0 13 43 119 146 114 147 0.89 2 12 0.0037 2.8 8.9 2.5 6 43 144 176 143 177 0.85 3 12 0.53 4e+02 2.0 0.2 17 44 182 206 180 206 0.85 4 12 1.4e-07 0.0001 23.1 0.8 6 44 201 236 195 236 0.91 5 12 0.035 26 5.8 1.8 12 29 237 254 235 266 0.73 6 12 0.0091 6.9 7.7 1.9 16 43 299 323 287 324 0.86 7 12 6.8 5.2e+03 -1.5 0.3 18 28 339 349 336 361 0.80 8 12 0.013 10 7.1 2.8 12 44 363 392 354 392 0.82 9 12 0.25 1.9e+02 3.1 0.8 10 40 391 416 389 420 0.74 10 12 0.15 1.1e+02 3.8 2.5 10 27 421 436 413 441 0.86 11 12 0.019 14 6.7 1.2 11 41 450 477 439 482 0.75 12 12 0.096 73 4.4 2.5 14 28 481 495 476 508 0.77
Sequence Information
- Coding Sequence
- ATGGAGGAGCAAATGCTTAAACATGAAATAAAGATGGAGATTGAGTATGAAGGTGAAATGACGATTAATGATAGGACAAATGTTGGAGATATTCCACAAAATACTCTTGAGCAATGCTACATCAAAACAGAACCGGTAACCCATGCCGAAGATGCTGGTTTTTCAGGGAATGAAGGTCTACTCATTTCGACAGGTCTACCACTAAAAATAGAAGTCAAAGTTGAAGATAGCATTATGGAGCACAATCAAGATCCCGTTCAAGTTTTCAAAGGTGACCAAACGGATCAGGAGCCACCTATTGCTGGACAAAACATAAACATGGACGACATTCAAGATAAAGTTTACGATAATGGCCGAAAAAATCGAATTAACTGTCCAATCTGTGGAAAAGACTTCAAGAATAgagcaaatttaaaaaatcacttgaAATATATTCATGCTTCCGATGAATCTATGGTGGAATGCAATGAATGCTACCGCACATTCAAGTCTAAGGCTCACTTACGCACACACATATCCTCTGTGCACGTAGCCGTGAAAGAGGTGTCGTGCGCACAGTGCGATAAAACATTCCTGAACCAGAAAAAGCTGAAAAACCATTTATTCTACGCACACCCTAAGCCTGAAGACAATATTATTTGTCCAATATGCaataaacaatataaaagtaGCTTGAATTTAAAGATTCATATGCGGCAAGTCCATCCGTCTAAAGATAGAATGTCTGCATGCGCAATATGTCACAAAACCTTTAAAAGCGAAATGCTTCTGCAACGCCATGTCAAATGGAGCCACCCTCCCGACGGCATGACCTACCGTTGCCCGGAATGTGGACGGACCTTACCCTCATTACAGTGCTATCAAAAGCATATAGCTAATGTACATTTAAGTTCTGCAACACAATGCAATCTATGCGGAAAATCTTTCAAAACTGAAAGAAATCTCGAAAGACACGTCAACTATGTTCACAACGGCCAAAAACCTGAAAAAAAGATTTACAAAGTCGGCGATTTCAAGTGCACTGAATGCGAGAAAATGTTCTCAACACAAACAGCCTTGGACTGGCACGTAGATAGAATACATCTCGAGAATAAACAAGAGAATGTTTGCAAAGTATGCTGTAAAGAACTATCGGACTACCAAAGTCTGAGACGACATATGGATACTATACATTCTGAACAAGCGGCCGAGTGTCCGGAGTGTCAAAAGGAGTTTAAATCATTCATACATTTGCAACGGCACATTAGAATCACCCATGCACCACCAGACAAAGAAGTCACCTGTGAACTTTGCAATAAGACGTTCAAATGTCTCATGCATTTACGGATTCACTCGCACGCAGTCCATCCAAAAGACGGAGAGCTATTCACTTGTGAAGTTTGCCAAAAGATCTTCACTTCAAAGAAATATATGCTGAAACATTTGAAAACTCATATAGCACAGAAAACTATACAGTGtgacatttgtatgaaaatgtatAAATCTATTACGGATGTGAATAAGCATAAAAAAAGggtgcataataaaaatatatcaacaGTCACAGAAATTATTATACCTTGA
- Protein Sequence
- MEEQMLKHEIKMEIEYEGEMTINDRTNVGDIPQNTLEQCYIKTEPVTHAEDAGFSGNEGLLISTGLPLKIEVKVEDSIMEHNQDPVQVFKGDQTDQEPPIAGQNINMDDIQDKVYDNGRKNRINCPICGKDFKNRANLKNHLKYIHASDESMVECNECYRTFKSKAHLRTHISSVHVAVKEVSCAQCDKTFLNQKKLKNHLFYAHPKPEDNIICPICNKQYKSSLNLKIHMRQVHPSKDRMSACAICHKTFKSEMLLQRHVKWSHPPDGMTYRCPECGRTLPSLQCYQKHIANVHLSSATQCNLCGKSFKTERNLERHVNYVHNGQKPEKKIYKVGDFKCTECEKMFSTQTALDWHVDRIHLENKQENVCKVCCKELSDYQSLRRHMDTIHSEQAAECPECQKEFKSFIHLQRHIRITHAPPDKEVTCELCNKTFKCLMHLRIHSHAVHPKDGELFTCEVCQKIFTSKKYMLKHLKTHIAQKTIQCDICMKMYKSITDVNKHKKRVHNKNISTVTEIIIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01501746;
- 90% Identity
- iTF_00844620;
- 80% Identity
- iTF_00844620;