Klyc001024.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- DMRT2
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000001.1:6362812-6364402[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-26 3.1e-22 79.1 11.4 1 47 15 61 15 61 0.99 2 2 0.42 2.9e+03 -0.9 0.0 6 15 112 121 109 127 0.76
Sequence Information
- Coding Sequence
- ATGCCGAGTGAGGGTTCCGAGGGTGAGAGTCGGAAGTCGCTGCGGACCCCTAAGTGCGCTCGGTGTCGCAACCACGGGGTGATCTCGTGTCTGAAGGGGCATAAGAGACTTTGTCGGTGGAGGGACTGCCGCTGTCCAGGATGCTTGCTGGTGTTGGAGCGACAGAGAGTGATGGCTGCTCAGGTGGCGCTCCGCAGACAGCAAGGGGCAGGTGGCAATAGTCAAGCCCGCGACGGCGAGGCCGCAGCGCTGGCCGCTCGCAAGCGAGCGTACCGGGCGCGGTTACGCTGCGTGCAGCTGAGCCGGGCCTACCCCGCGCCACAGGCACACTACAGTAAGTGTTCTCTACACGAGGTTACAGTCAGCTCGCTACGGCGAGGCCGCAGCGCTGGCCGCCCGCAAGCGCGCGTACCGGGCGCGGTTACGCTGCGTGCAGCTGAGCCAGGCCTACCCCGCGCCACAGGCATACTACATCAGCCTGAGGTCGCAGCGCTGGCCGCTCGCAAGGGCGCGTACCGGGCGCGGTTACGCTGCGTGCAGCTGAGCCGGGCCTACCCCGCGCCACAGGCACACTATAGTAAGTGTTCTCTACTCGAGGTTACAGTCAGCCTGCGACGGCGAGGATGCAGCGCTGGCTGCGTGCGTGATGTATGA
- Protein Sequence
- MPSEGSEGESRKSLRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGGNSQARDGEAAALAARKRAYRARLRCVQLSRAYPAPQAHYSKCSLHEVTVSSLRRGRSAGRPQARVPGAVTLRAAEPGLPRATGILHQPEVAALAARKGAYRARLRCVQLSRAYPAPQAHYSKCSLLEVTVSLRRRGCSAGCVRDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -