Basic Information

Gene Symbol
-
Assembly
None
Location
HiC:14493548-14520122[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2.6 2.4e+02 2.9 1.0 1 23 54 77 54 77 0.94
2 20 0.0066 0.6 11.0 3.2 1 23 84 107 84 107 0.97
3 20 7.1 6.5e+02 1.5 4.3 1 23 178 200 178 200 0.96
4 20 0.0013 0.12 13.2 1.0 2 23 206 227 205 227 0.97
5 20 7.8 7.2e+02 1.4 3.0 1 23 233 255 233 256 0.93
6 20 0.16 15 6.7 3.4 2 22 498 518 497 518 0.95
7 20 0.17 15 6.6 0.6 2 23 772 793 771 793 0.96
8 20 0.018 1.6 9.7 0.9 2 23 873 894 872 894 0.96
9 20 0.075 6.9 7.7 1.4 1 23 902 924 902 924 0.97
10 20 0.092 8.4 7.4 3.4 1 23 960 982 960 982 0.95
11 20 0.00038 0.035 14.9 5.4 1 23 990 1012 990 1012 0.99
12 20 0.34 31 5.7 4.3 1 23 1097 1119 1097 1119 0.99
13 20 3 2.7e+02 2.7 1.2 1 19 1175 1193 1175 1197 0.91
14 20 0.02 1.8 9.6 0.3 2 23 1204 1225 1203 1225 0.97
15 20 0.021 1.9 9.5 0.8 1 23 1293 1315 1293 1315 0.95
16 20 0.012 1.1 10.2 0.9 1 23 1321 1343 1321 1343 0.95
17 20 0.0052 0.48 11.4 2.6 1 23 1433 1455 1433 1455 0.97
18 20 3.8e-05 0.0035 18.1 1.2 1 23 1461 1483 1461 1483 0.99
19 20 0.61 56 4.8 2.0 1 23 1576 1598 1576 1598 0.96
20 20 0.011 1 10.3 3.9 1 23 1609 1631 1609 1631 0.98

Sequence Information

Coding Sequence
ATGCTACAACAGATGTCCTCGCCGCACAGCGCGCAACTCGGCGAGGTCGCGACTCTCGTGCGCTCCTTCGAAGGCCGCCTGTGCGGCGACGCATCTTCGGAGGCTTCTTCGGATGCCGCGGAAGATTTTGAATTACCACAGTGCAAGATAAAAAGGAATTACAATTGCACGAAATGCACGTTTTATACGCAGAATCCACGCGCTTATCTCGTGCATACTCGTGACGTACACTTCGAAAAACTTAAGATTTATGACTGTCCGTATTGTGTTTACGCTTCACGACATCATCAAAAACTTACAAGACATATAAAAATGGTGCATGAAAGTTCGACCTCAAATAAAGAGTCGGAAACTTTACCGTCTACATCTGAAAACTTAGAGCCTCTGGAAAGAATGGAAGAGCTGTTTGAAGAAGTAGAGGAATGTGATGATTCGCAGATGGATATAGAAGATGGTAACGAGGAGTCACTCGAACGTACGCTCGATGCTGAAATATTACCTCAAGGATTGCCAACGGAAAGAAGTAAATTCTTTTCGTGCAGCAAATGTAATTATGTCACTCACATTAGAGCTAGATATACAAAACATGTTAAATATCATTCAATGCCAATGATTAAATGTACTATGTGTGATTTTCGGACGCCTTATAAATGGAATTTGGATCGTCATATGAAAAACCACGGTGGTAACGGAAGCTTCCATTGTTCAATGTGCAACTTCACGGCCGATATAAGACAGAGTTTGACAGTACATGAAATGAATCATCATACACCGCCTGCTGGTCAATCGAGTTCTAGCCGGCGTCGCAACCGGGTGGGCGCCAGTGACATGCCCACATGTGTCGATATGACGGACGGAAACAATCTCATCTTAAAAGAGGAGGAAGGGAGCGGAGACTCACGGTCCTCACACTCTGCATCGGAAATGGGTTTACAGTACATGGATAAAGACATCGTGAGTTGTAACAGCGACTCGAATGAGGCATCATCTTCTGATGTAGTAAAAAAGGAAAATTTACTTATAGCAAAAGAAACAGACAGTGATATCACAGTGGATGAAGCAAAGAATCTGAAACAATGTAAAAAGGTACCAAGGCCTATTCCACAACTTATTCCTTTAAACGCTTCAACGCCAAATCAAACCAAAACTATACCCGGAGAACCGCCAGCTAAAAAATTAAAGGAAACCACATTACAGTCAACAGATATCAATCCTATCCAAAAAGCTGATAATTTATCTATAGATATTACCCTAACTCCAGTTAATAATACGACTATCAAAGATACTTCTATTCGTAAAAAGAATGAATCATTTTTTGACCGATTGAAAGAAAGGTTACTAACCGAAACTGGCGAAGAAGGTTCACTAATATGTAAAAATTGTGGTTTTGAAAGTAAATGTTTATCAGAGCATTCTGTTCATGAAAAAAATTGTACATCTCAATCAAATCGAATGTTAACAAACGCATTACATTCAAGTTTGGGGTCGACGAGATGCCAAAACTGTAGACATCGCTGCAAGTCAAGCGCCGATCTATATATACATATGCAAACATGCGGAAAGAAAGATAATACTTTTGAACATGCTTCAGAAGTACATAATCAAGATAGTAGCGAAGCTGTAACTGTTAATCAAGAAAAAGAATTGGAGCCCCATCCAATGGAAAATGTTGTTTTTGTGTGGAATAATATAAGCCATGACTCAAATAAATTTAATACACCATTAGATATAAATATAAATGATGATTCTACGCTACCAGAACAAAATAGAAGTTTCGATCCTGATATTACTGACGATAACGAAACAATGAATTTATCGCCTAGCCAAGCAGTTGGAAAAAAAGTTTTTAAATGTCCCCACTGTTTGTTCTGGGCGTCAACTGCTTCAAGATTTCATGTCCACATAGTTGGACATCTAAATAAAAAACCCTTTGAATGTTCTTTGTGTAAGTATAAATCAAATTGGAGATGGGACATAACAAAGCATATTAAACTTAAATCGGCTCGAGATCCTGATCATGCAGAAGCAAAAGTACTTATGACGGATGAGACTGGTAGGCGCAACTACAGCAAATATAATAAATTTTTAGCTATGCCTATATTAAACGAAAACGGCGAAAACGAATTTCACTATATTGACCAAAATACATCTGTTGACACAGCGTTAGACGATGAAGCATTTAATGACATTACAGATGGAATAAATGTACCTTTTGAAATGCAGCCTCTTAATCTACAAACCCTGACTAATGATCACAAATATGAGTTAGACAACAGAAGTCTTGATCCTAAGAAACCTAAAAAAACATTGTGGAAATGCAAGAAATGCAACTACAAAGATTCATCTAAAGAAGCTTTATTGGAACATGTTCGAGAACACTCAAAACCAGATGACGGTTTAGAGGAAACAAAACCTATTATCAATAAAAAACCTGAGAACATGCCTGATCCAGCCGACTTAGCATACCGATGCGGACACTGTAACCAGCTATCTAATTGGAAGCACGTTATACAGAGACATTGCCGATTAAAGCATGATGGGGTAATCAAAGTTATAACCACGGTGAAACCTAAACCGGATATAAATGCAATATCAGTAAACGACATAAGTAGTGACACTTGTACTAAATGTCCGTTTAAAACAAATGATAAGAATACGCTTTTGGCGCATTTACAACAGCATCAGCCTTCACCGCAGTCTATATTTAAGTGTTACTTTTGCCCTTTCTTTGTTAAAGACGAACATGAATTAATTCAGCATCTTATTTTACATGGCATAACTGATCCGGAAGATTATATATCAAAAGCAATGGGTTGCAAATCGCCTTTACCGGAGCAAGGGATCCTCTCTTTACCAACTTCTTCTTCAACGAAAAGACATAGATGTACTGAATGTCCGTATGAAACAAATAGTAAATCGCAGTTTATGTATCACGAGCAATTTCACCGACTACCGGCCGACACTCCCTATAAATGCCAGGAGTGTAATTATAGTGTTTCAAAAAGACATTTGCTTCATCAACACATGCGAGTCCATGGCATTTTTACCAAAAAATGTGAAATGGACACTGAAATGGAATCTTTTTCTTCGAATTCTAATCAAGTAGATGCCCAATCTGAGTTCTCAATAAACCTTGATGAGATTCCTTTTGTATGGGTGTCAGCTAAAAATGAGTTTCATAAAATGTATAAATGTCGTTATTGTTCTTATGTGAATTCACAAAAATGTAAGATACCTAATCATGAAAAAATTCACTGCATTATATTTGAAAATAGTGATATAACAATATATAAATGTCTCGAATGTAAATTCACATGCGATAATAAGGTAAGATTATCGGAGCATTCTAAAACTCATGGAGAAATATATGGGCGCATTTATTGCCCTGTTGAACCTGATATGCCAGATGAAGAACAAATATCTAAGTTGCGTAAAGTAATAGACAGAGAAAAATGTAACACAGAAGACGATTTTGTTAACGATGAAGAAAATCAGGGCGATGGTAAAGAAACTAAAACATTATACTTCTGTCAAAAGTGTCCGGCCAGATTTTTCGCAGATAGTGAGTTAAAAGTCCACGACAAGTTCCATGACTTAATATTTTTGAATAAATGTAAGAATTGTGAATTTTCAGTACCACAAGCAAATGAATTAAATACTCATATTTTTGTACACAGTGATGAATATAACACAAAAACAAAAATGCTTAAATTCGTTCATAAAATTCACAGTTTGTATAAGGAACCCAAGTTACAGCTTGTTCATTGTCCACTTACATTAGATGTGACGTGGGTAGTAGCAAATCCCGGGAGAAATTATGAATTTCATGAAAATAGTACCAAAAAATCTTCAGATACAAAACATGTGCCAAAACAGTACTTTTGTAAGGAATGCCCAGCAAAGTTCTTTAAAACTTCTGCATTAAGTTATCATATGGGACTACATGGAGGAGAAGGTGAACATAAATGTAAGAAATGTAGCTATGCTGTCAAAAACATTGGAAATCTAGCAAAACACGAAATACTGCATGAGAATGAAAATAAAACCACTACATGTGATTATGAATCTGGTGATGACTTAGACTATAAAAATATACCTTTATCAGGTACAGACTTATTCCAGAGAAAAACAGAAGCTCAGAAGAGAGTTTTGACTGATAAGGATAAGCTTGTAAAGCCAAACGATCATTTTCCACCTGTACTTCAAGCTGATCCACAATTTGGATATCTAATGCATGGTAATCCAGAATTCATTTATCCGACTTACCTTAAAAATGGCCGACAAAAGGAAAAACGTTATAAATGTCACAAATGTCCATCGGCATTCGAAAAACGCGAACAATACAAAATACATTTATCATTACATGGTTCGAAGCAAAGGTATAAATGTGAAATATGTGACTATTCTGTGAAATACTACGCTAATTATGTTCAACATATGAGAAAACATCAAATGAATGATGAAGCTCAAGCAGAACGAAAGAAAGGCGTAAATGGTTATGTAGAATCTGAAGTTGAAAATGCCGAGAGCAAGAAAGATGAAAGTGGCGACAACATAAAATTAGCTATCAAAACTATGCCTAGAAGACCTCCTCGAAGTGATTTTCAGCAATTTTCAATTAGTGATCAACAAACACTCCGATTACTACAACGTCGACGATCTATGAACCATATAGCAAAGGACGCTACTACCTCAGAACTTTCACCTACAAAAGACCGAAAGCTGCACATGTGCCTTTTATGTCCATACACAAATCAACGCCAAGATGCCCTTAGTAACCACTACAGAAGACATGATGATACTGACATTCTCAATTCTGGTAATCATAAATGTTCATTTTGTGATTTAGTTGTAGTGCAATCGCATTTTCTTCGTGAGCATTTAAAAACTCATTTCAATTACCAAAAGAACTTGACCCCCGATTGTTTTGTTGCTAATGAAAACGTAAGTTTCACTATTACTAAACTAGAAGAAAATGAAGAAAATCAATCATCTCGTGATCTCAAATTAGATATGCTTAATAAAAGTAATGTGTGCAATGAAAACAAAATATTTGTAAAAATTAAAACAGGCGAACTGTTCGTTGAATAG
Protein Sequence
MLQQMSSPHSAQLGEVATLVRSFEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDVHFEKLKIYDCPYCVYASRHHQKLTRHIKMVHESSTSNKESETLPSTSENLEPLERMEELFEEVEECDDSQMDIEDGNEESLERTLDAEILPQGLPTERSKFFSCSKCNYVTHIRARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFHCSMCNFTADIRQSLTVHEMNHHTPPAGQSSSSRRRNRVGASDMPTCVDMTDGNNLILKEEEGSGDSRSSHSASEMGLQYMDKDIVSCNSDSNEASSSDVVKKENLLIAKETDSDITVDEAKNLKQCKKVPRPIPQLIPLNASTPNQTKTIPGEPPAKKLKETTLQSTDINPIQKADNLSIDITLTPVNNTTIKDTSIRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCTSQSNRMLTNALHSSLGSTRCQNCRHRCKSSADLYIHMQTCGKKDNTFEHASEVHNQDSSEAVTVNQEKELEPHPMENVVFVWNNISHDSNKFNTPLDININDDSTLPEQNRSFDPDITDDNETMNLSPSQAVGKKVFKCPHCLFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHAEAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYIDQNTSVDTALDDEAFNDITDGINVPFEMQPLNLQTLTNDHKYELDNRSLDPKKPKKTLWKCKKCNYKDSSKEALLEHVREHSKPDDGLEETKPIINKKPENMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDINAISVNDISSDTCTKCPFKTNDKNTLLAHLQQHQPSPQSIFKCYFCPFFVKDEHELIQHLILHGITDPEDYISKAMGCKSPLPEQGILSLPTSSSTKRHRCTECPYETNSKSQFMYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIFTKKCEMDTEMESFSSNSNQVDAQSEFSINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENSDITIYKCLECKFTCDNKVRLSEHSKTHGEIYGRIYCPVEPDMPDEEQISKLRKVIDREKCNTEDDFVNDEENQGDGKETKTLYFCQKCPARFFADSELKVHDKFHDLIFLNKCKNCEFSVPQANELNTHIFVHSDEYNTKTKMLKFVHKIHSLYKEPKLQLVHCPLTLDVTWVVANPGRNYEFHENSTKKSSDTKHVPKQYFCKECPAKFFKTSALSYHMGLHGGEGEHKCKKCSYAVKNIGNLAKHEILHENENKTTTCDYESGDDLDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCEICDYSVKYYANYVQHMRKHQMNDEAQAERKKGVNGYVESEVENAESKKDESGDNIKLAIKTMPRRPPRSDFQQFSISDQQTLRLLQRRRSMNHIAKDATTSELSPTKDRKLHMCLLCPYTNQRQDALSNHYRRHDDTDILNSGNHKCSFCDLVVVQSHFLREHLKTHFNYQKNLTPDCFVANENVSFTITKLEENEENQSSRDLKLDMLNKSNVCNENKIFVKIKTGELFVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01078702;
90% Identity
iTF_01078702;
80% Identity
-