Basic Information

Insect: Kallima inachus
Gene Symbol: -
Assembly: None
Location: HiC:7846201-7856201[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 9.8e-06 0.0009 19.9 3.2 1 23 261 283 261 283 0.98

2 11 0.074 6.8 7.7 2.0 1 23 291 314 291 314 0.93

3 11 0.00021 0.019 15.8 2.6 1 23 411 433 411 433 0.99

4 11 1.6 1.5e+02 3.5 4.1 2 23 442 464 441 464 0.95

5 11 0.0046 0.42 11.5 2.6 1 23 468 490 468 490 0.98

6 11 0.00043 0.04 14.8 2.0 1 23 495 518 495 518 0.97

7 11 0.028 2.5 9.1 2.1 3 23 524 545 523 545 0.95

8 11 0.058 5.3 8.1 0.0 2 20 564 582 563 584 0.93

9 11 1.5e-05 0.0014 19.3 1.0 1 23 655 677 655 677 0.98

10 11 0.00033 0.03 15.2 1.9 1 23 683 705 683 705 0.96

11 11 1.3e-05 0.0012 19.5 2.9 1 23 711 734 711 734 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	9.8e-06	0.0009	19.9	3.2	1	23	261	283	261	283	0.98
2	11	0.074	6.8	7.7	2.0	1	23	291	314	291	314	0.93
3	11	0.00021	0.019	15.8	2.6	1	23	411	433	411	433	0.99
4	11	1.6	1.5e+02	3.5	4.1	2	23	442	464	441	464	0.95
5	11	0.0046	0.42	11.5	2.6	1	23	468	490	468	490	0.98
6	11	0.00043	0.04	14.8	2.0	1	23	495	518	495	518	0.97
7	11	0.028	2.5	9.1	2.1	3	23	524	545	523	545	0.95
8	11	0.058	5.3	8.1	0.0	2	20	564	582	563	584	0.93
9	11	1.5e-05	0.0014	19.3	1.0	1	23	655	677	655	677	0.98
10	11	0.00033	0.03	15.2	1.9	1	23	683	705	683	705	0.96
11	11	1.3e-05	0.0012	19.5	2.9	1	23	711	734	711	734	0.98

Sequence Information

Coding Sequence: ATGTTTGCCTTAAAAGCATGCACAGTATGCTTGAAAACTGACGTGAAAGTGTTCAATATGAACACAGGACAACTTAGACATGAATATAATTTAGTATCTGGTTTAATAACTCATGGTCAAAATGGTCTACCTGAATACTTGTGCTTTCAATGTGTGGCATATGTTAAAAACTTCATAAGATTTCGTGATAAATGCCAACGTACATATTATGCATTACAAGAAATTCTAGATCGAGATAAAAAGATAACACAGTCAATTATAGAAGAGCTAGACTCAAATGTGCTAAATATTGAACCTACACTGTCCTATCTAGCTCCAGACCACAACAGAACTAAGTATGAAAATGTAAAATATAAATGTGTAAAGCAAAATTTTGTAGATGATAAACAGCGAGATAACATAACAGTCGTTCAGTATGGCACAACATCTGATAATCTAATATTTGAAGTGCCTAAAAAAAAGCCTAAACTGTGGGTTGAGTTAGAAGATAATATTAAACAGGAAGAAGATCCTATTGTAAAGAATTATGAATCATTCAACACAGACACATTTACAGAAAGCACAGATCTCGATACGAAACAGAATGATGATAGTTTCTTTGATAGCAACTTTGATGATTGTGATGGACCACAAAATGAGATTGACGATAGTGATAAAATAGACAATCAAGCTGATGTCAGTGGAATGAATTTAGAAGAAGAATATGCAACTATATTGCCAATATCTGTGAAAGAGGCTAAGGCTGTCGTTGATGTGTATAAGTTGCTTGCACAAGGCAAGTTTTCATGCAAAGTGTGTGGAAAGACATACAACAGTGAATGCCGATTGAAAGCGCATATGAGAATGCATGAAATGAGTATAAACGGTACTTTCTTCTGTGTGTTGTGCAAGTATTACTATAGATCAGAATTGCTTTTGAAAAGGCATATGACAGAAAAGCATTTTTATAAGTACTTGTGTAAAAAGTGCCCTGAAGTAAACTTTGACAGACATTCAGCAAAAAGACATTATTACTGGGGGCATTTCCAAGAAATTTCCAACAAGGGCTCCAGTTGGTCACGGAAAGCTAGAGTTACTAAAGGTGGTAGGAAGAATAAGTCTGCTATACGTCGTTTAGGAACTAAGCAAGAAGTACCACAAGATTTTCCAATTCAATCTGCTATAAGTCAGGATGAACAATATGCCATGGTGAGAGATAGACAGAAGACAAAGAACTACATTGATTCTCCATTCAAGTGTGAATATTGCTTCAAAGGCTTTAGGGTTGCCACAACATTTGAAACACATTTAAAAAAACATGATCCTGCTTTATCTGGCAAATTACAATGTGATGCATGCAAAATATGCTACCCAAGTACTGGGAAGATGTACAAACACATGACAAGATGTCATATATTCAAATACTCATGTCAGATGTGTGGCTATACATGCTTTAATAGGGGTCAAGCTAAAGTTCATTACAGATGGCATAAAAAAGTAACATACCCATGTCCACATTGTAAAAAGGAATTTTCAAAAGAGTCAACCAAGCTAGGCCACATTCGTAAGATGCACCCATCAACTAACATCTGCAACTTGTGCGGACACAGCTTCGTGAGCGTAACTGGTCTACACATACACAAGCTGAAAACTCATAGCAAACAGGAAATGGAAGAGAACGAAGGCAAAGTGGACACGTCGAATCCGTTGTACTGTGCGGAGTGCGGGGTTCAGTTCAGAGATGATGACGCTTTCACCACCCACCTCGGTTCCTCTAACAAACATGCTGATACTAATCGCGCCATCACGAAGCTGGGCGCGGAGGGCGAGGGCGAGGGCGCGCGGCTCACGGACAAGGGCGTCGTCAACATGGGCCGCGCCACCTCCTCGCACTGCGACATCTGCAATAAGTACTTGCTGAACGACACGCAAGCGGTGCGTCACTACGACGCGGAACACCCCGGAGCGCCCTACCTCAAGCGGTACATGTGCGACATCTGCGGACACAAGACTAGGCAATACGCCAACCTTGTTGTCCACTTGCGTACTCATACTCAAGAGAAGCCATATTCGTGCCCACATTGCGACCGACGCTTTAGTATGCAAAACAATCGCGATCGACATCTTGTTGTCCACACGGGTGAGAAGAAATACCAATGTCCCCACTGCAACCGTCGCTTCTCCCAGAAGAACACGGTGAAGCTCCACGTGCAGACGGTGCACCTGAAGATCCCCTACCCGCCGTGGAACAAGAAGAACCGCAAGCGGCGCCGCGACCTCGACTCCCCGCCCTCCCCCGCGCCCAGCTACAAGCTGCCGCTCGACTCGCACGGGAACTACCTCAGCGCCTACATCGACACCACCAACAAAGTCTGCGGTACTAACTAG
Protein Sequence: MFALKACTVCLKTDVKVFNMNTGQLRHEYNLVSGLITHGQNGLPEYLCFQCVAYVKNFIRFRDKCQRTYYALQEILDRDKKITQSIIEELDSNVLNIEPTLSYLAPDHNRTKYENVKYKCVKQNFVDDKQRDNITVVQYGTTSDNLIFEVPKKKPKLWVELEDNIKQEEDPIVKNYESFNTDTFTESTDLDTKQNDDSFFDSNFDDCDGPQNEIDDSDKIDNQADVSGMNLEEEYATILPISVKEAKAVVDVYKLLAQGKFSCKVCGKTYNSECRLKAHMRMHEMSINGTFFCVLCKYYYRSELLLKRHMTEKHFYKYLCKKCPEVNFDRHSAKRHYYWGHFQEISNKGSSWSRKARVTKGGRKNKSAIRRLGTKQEVPQDFPIQSAISQDEQYAMVRDRQKTKNYIDSPFKCEYCFKGFRVATTFETHLKKHDPALSGKLQCDACKICYPSTGKMYKHMTRCHIFKYSCQMCGYTCFNRGQAKVHYRWHKKVTYPCPHCKKEFSKESTKLGHIRKMHPSTNICNLCGHSFVSVTGLHIHKLKTHSKQEMEENEGKVDTSNPLYCAECGVQFRDDDAFTTHLGSSNKHADTNRAITKLGAEGEGEGARLTDKGVVNMGRATSSHCDICNKYLLNDTQAVRHYDAEHPGAPYLKRYMCDICGHKTRQYANLVVHLRTHTQEKPYSCPHCDRRFSMQNNRDRHLVVHTGEKKYQCPHCNRRFSQKNTVKLHVQTVHLKIPYPPWNKKNRKRRRDLDSPPSPAPSYKLPLDSHGNYLSAYIDTTNKVCGTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00986621;
90% Identity: iTF_00825052;
80% Identity: -