Basic Information

Insect: Kallima inachus
Gene Symbol: -
Assembly: None
Location: HiC:17415224-17425934[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0082 0.76 10.7 2.9 2 23 32 53 31 53 0.96

2 14 0.00019 0.017 15.9 2.5 1 23 91 114 91 114 0.97

3 14 5.7e-06 0.00053 20.7 1.7 1 23 116 138 116 138 0.98

4 14 0.0011 0.1 13.5 0.4 1 23 173 195 173 195 0.98

5 14 0.19 17 6.4 0.1 2 19 223 240 222 242 0.92

6 14 0.012 1.1 10.2 1.7 1 23 252 274 252 274 0.89

7 14 2.6e-05 0.0024 18.6 1.9 1 20 280 299 280 301 0.95

8 14 0.0024 0.22 12.4 0.6 1 23 313 336 313 336 0.95

9 14 6.1e-05 0.0056 17.4 0.0 2 23 342 365 341 365 0.95

10 14 2.5 2.3e+02 2.9 1.4 3 23 372 392 372 392 0.96

11 14 0.024 2.2 9.3 0.2 1 20 397 416 397 419 0.92

12 14 0.00041 0.038 14.8 1.0 3 23 427 447 425 447 0.96

13 14 7.5e-06 0.00069 20.3 1.0 1 23 453 475 453 475 0.98

14 14 4.6e-06 0.00042 21.0 2.1 1 23 481 504 481 504 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0082	0.76	10.7	2.9	2	23	32	53	31	53	0.96
2	14	0.00019	0.017	15.9	2.5	1	23	91	114	91	114	0.97
3	14	5.7e-06	0.00053	20.7	1.7	1	23	116	138	116	138	0.98
4	14	0.0011	0.1	13.5	0.4	1	23	173	195	173	195	0.98
5	14	0.19	17	6.4	0.1	2	19	223	240	222	242	0.92
6	14	0.012	1.1	10.2	1.7	1	23	252	274	252	274	0.89
7	14	2.6e-05	0.0024	18.6	1.9	1	20	280	299	280	301	0.95
8	14	0.0024	0.22	12.4	0.6	1	23	313	336	313	336	0.95
9	14	6.1e-05	0.0056	17.4	0.0	2	23	342	365	341	365	0.95
10	14	2.5	2.3e+02	2.9	1.4	3	23	372	392	372	392	0.96
11	14	0.024	2.2	9.3	0.2	1	20	397	416	397	419	0.92
12	14	0.00041	0.038	14.8	1.0	3	23	427	447	425	447	0.96
13	14	7.5e-06	0.00069	20.3	1.0	1	23	453	475	453	475	0.98
14	14	4.6e-06	0.00042	21.0	2.1	1	23	481	504	481	504	0.98

Sequence Information

Coding Sequence: ATGGCTTCACTCACCCATATGGACCCAGAAAGTTCAAGCTCAGCTTTATACCGGAGCCCTAAACCCACTACAATTGATTTAGTAGGTGGTATATACTGCCACATATGTCATATTACATATGCTAACAAGAAAGAGTATGATTCGCATTATATTAAACATGAGACTGCAAGCAAAGATATAGTGTACACGTGTGTGGTGTGCCATAAGGAGATAGCTGGCTATCCGAGTTTCCGTGGCCACTGTTACACAAGCCATGTCATAAAAGATAGATTCAAGTGTGAACATTGTTCTAAATTGTTTTCGAAGTCTCTATCACTAAAGGAACATATCAATGTAATGCATAGATTTAAATGCTCATCCTGCAATAAAGAATTTACAACAAAAAAAGAGCTTCAGCTGCATCAAATCATTCATAACAACACTGATATGCCGCCTTTCAAATGTCAAGCTTGTGATAATCAAATTGATTCACTCGAAGGCTGTAAAGATCATATTGATTTACACTCCGCTTCTATATACTTTTGTCCAATATGTAATGAAAATATATCGAGTCGTGATAATGCTAAAGAGCACCTTAAAAAACATTTCGGTAATGACAACAATGAGCAACCGGTAATGCATAAGGTAGATAAAGATGAAAGTTACATAGAGCAGTTGGGTGGTATTTCGTGCAAATATTGTCCTCTTATTTACAAGGATAGAGTAGAGTTTGATGCTCACTTTTCATGCGAACATGGAAATGAAGATATAGTATACACATGCAATGTTTGTGGGAAACAATTTGAAAAATACTCAGTGTTCAGTGACCATTCCTATAACCATTTTATGAAGGATAGATTCTGCTGCGACATTTGCCATAAAACATTCAACCGTCTCTCTCTGCTGGTGACGCACATGTCAGCGTGCCAAGCCAATGGGGAAGCCAATGGGAAGCCATTTGCCTGTTCTGAGTGCGGACACCGTTATGCTACGGAAATGCGTCTTCGTGAACACCTGCGAGACGTGCACGCTATCCATTGCATTGTTTGTCCAGAAGATGGTTGTCAGAAAATATTTCCCACACCAAAAGATTTAATCAGCCATCAACGTGAGCATCGTTCGCAGCAGAACTGGTGTCGACAGTGTGGTCTACTGTTCCCCACTTTAAAATCTTGCGAGCGTCACTTGGACGTTCACAAGAAGAAACTCTATATCTGTCCAGTCTGCAATCGAAATTACAGTGAAAAATACCTTATTCTAAAACACGTGCCACAGCATTTTGAAACTGTTTTGCACCTCTGCAAAGTATGCGGAAAAGTCTACAATGCCAAGAATCGTCTTATCGAACACATTAAAACTCATTCTGAAACGAAAAGTCATACATGCACATATTGTGGGAAGGGTTTTGTGAAAATTGGTCAGCTACAACAACATTTGAACATCCACACTGGATCGAAGCCATACAAATGTCCCATATGCTCGAAAACGTTCGCCAGCTATCCGAACTGGCACAAACATTTGCGCAGAATGCACAAAGTCGATGGCAAAAAATATAAGAAGAGTTCCGAGAATACTTCAAACATTAATGATGAATCAGAATCAGACAGTATCGAAAATTTTGATGAGGAAGAATCACCTACAGAAATTGATATAAAGGAAATGAATACAAATCAAGTGAACATAGAAATTCCCCCAGAACAAAATGATCATTTAACAAACGCTGAGCTACATGTCGGTATATCTGAAACATACATGTTTCAGGAACCAGACGATAGTACTATGGAATCTGACAGTATCGATCAAATCATTATAGAAAAAGAATTAGAAATCTTTGAGGACACAGCAAACGCTAATTTGAAAAACATTGTCGAATTTATTAATGTTTTACCGACTAACAACACCACATTAATTGATGGCGCGGGCCCGCCGGCGGAGTACGGGCCGTCGTTCCCGGCGGGCGACGAGCACATGCCGCACATCGACCCGCTGCTCACCATCAAGCACAGCGAGGCGCCCTGGGAGCCGGCGTGGCGGGCGCCCTGGGAGCCGCACCCGCCGCTCCCGCCGCACCCGACGCACCCGACGCTCCCGACGCTCCTCTCGATGATGAACACCGACATATTTTGA
Protein Sequence: MASLTHMDPESSSSALYRSPKPTTIDLVGGIYCHICHITYANKKEYDSHYIKHETASKDIVYTCVVCHKEIAGYPSFRGHCYTSHVIKDRFKCEHCSKLFSKSLSLKEHINVMHRFKCSSCNKEFTTKKELQLHQIIHNNTDMPPFKCQACDNQIDSLEGCKDHIDLHSASIYFCPICNENISSRDNAKEHLKKHFGNDNNEQPVMHKVDKDESYIEQLGGISCKYCPLIYKDRVEFDAHFSCEHGNEDIVYTCNVCGKQFEKYSVFSDHSYNHFMKDRFCCDICHKTFNRLSLLVTHMSACQANGEANGKPFACSECGHRYATEMRLREHLRDVHAIHCIVCPEDGCQKIFPTPKDLISHQREHRSQQNWCRQCGLLFPTLKSCERHLDVHKKKLYICPVCNRNYSEKYLILKHVPQHFETVLHLCKVCGKVYNAKNRLIEHIKTHSETKSHTCTYCGKGFVKIGQLQQHLNIHTGSKPYKCPICSKTFASYPNWHKHLRRMHKVDGKKYKKSSENTSNINDESESDSIENFDEEESPTEIDIKEMNTNQVNIEIPPEQNDHLTNAELHVGISETYMFQEPDDSTMESDSIDQIIIEKELEIFEDTANANLKNIVEFINVLPTNNTTLIDGAGPPAEYGPSFPAGDEHMPHIDPLLTIKHSEAPWEPAWRAPWEPHPPLPPHPTHPTLPTLLSMMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01080941; iTF_01079279; iTF_01080118; iTF_01078433; iTF_01507455; iTF_01508279; iTF_01506568; iTF_00824969; iTF_00695900;
90% Identity: iTF_00824969;
80% Identity: -