Kina016910.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Kallima inachus
Gene Symbol
-
Assembly
None
Location
HiC:3928282-3931251[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.035 3.2 8.8 0.7 1 23 118 141 118 141 0.96
2 17 0.26 23 6.0 0.1 1 23 212 234 212 234 0.95
3 17 0.00025 0.023 15.5 0.2 1 23 238 260 238 260 0.98
4 17 0.0029 0.27 12.2 1.9 1 23 265 288 265 288 0.95
5 17 0.0093 0.86 10.6 0.3 2 23 295 317 295 317 0.92
6 17 0.042 3.9 8.5 6.4 1 23 324 347 324 347 0.96
7 17 0.00029 0.027 15.3 5.4 1 23 353 375 353 375 0.97
8 17 0.4 37 5.4 0.5 1 21 521 541 521 544 0.88
9 17 0.0052 0.48 11.4 0.7 3 23 571 591 569 591 0.96
10 17 0.00019 0.018 15.9 2.3 1 23 613 635 613 635 0.98
11 17 9.8e-06 0.0009 19.9 1.0 1 23 639 661 639 661 0.99
12 17 7.5e-06 0.00069 20.3 0.2 1 23 666 689 666 689 0.96
13 17 4e-05 0.0037 18.0 0.4 2 23 696 718 696 718 0.97
14 17 4.1e-05 0.0037 18.0 0.4 1 23 725 748 725 748 0.98
15 17 0.013 1.2 10.1 4.8 2 23 755 776 754 776 0.96
16 17 1.4e-08 1.3e-06 28.9 1.2 1 23 782 804 782 804 0.99
17 17 0.086 7.9 7.5 0.1 5 23 812 831 811 831 0.95

Sequence Information

Coding Sequence
ATGGACTCTATATCGACGGAAAAACAGACGCCGCCAAAACGGATAATACCACTGTTTCAAGTGGCGTATGATCGGAGCCTTTGCAAACCTTTGGGGACAGTGACAGCTTTCCGAAAATTACGCCTTAAAAACAAATCTAAAATGCCGTCTCCTCCTGCTGTGAGAAATTATACGCCATCTCGGAGCCCGTCGCCAGTTTCATTAGGAGACAGAAGTCCTACACCAGTCCAAACTTTACCTTCTGTAATACCAACACCAAAAGTCTTAAAAAAGCAGGCTGATTATCGCCAAAATGCTTTAACTGTTTTTGAATTTTCAACTGTATATCCATTTATTTACGGGAATAATAAATTTAAATGCTTTGTTTGCTCTCAACCTTTTCTCGAAACTTCTCTTTTAAGACAGCATATGAATGAAAACCATACGTTTGCTCCTATAAAAAGATTACTAAATAATCGAAGAGAGAATGTTTTAAAAGTAGATGTCGGCGAGTTGATGTGTAAATTATGTTCCGTGAAACCAAAAGACTTATTGCAACTGAAATTTCATTTGAAAGAAGACCATCAGAAACCTATAGACCCAGATTTACAGGATAATATGATACCATTTAAATTAGAAGAAGAGGATGGTTCCTATAAATGTGTTATATGTGATCAACTATTTATAAAAGTGCGAATTCTTGTTATTCATATGAGCGTCCATTTTAATAATTATAGCTGTGAAATTTGTGGATCAGGATTTATGACGTTACGACTTCTGAAAAAGCATTTGGAAGTTCATGAAACTGGCAATTTTCCATGTGATAGATGCAATAAAGTGTTTAGCACTACTCATAAGAGATCATTACATATACGAGGCGTACATCTTAAACAATATCCTCGTCGTTGCCCGATATGTCCAGAACGTTTCAATTCGAATTATAGAAGAACGATACATCTTCAAGATGTTCATAATCAATCGACCAGAGTCCATAAATGCGAAACATGCGGTCGTGGCTTCAATTTAAAGTATCATTTGATTTGTCATACTCGATCTGTACATTTACAGGAAAGAAATCATCAATGCAAAGTGTGTTTGCAAAGGTTTTGCAATAAAGAAACGTTGAAACGACATATGGTTATACATACAGGAATCATCGTAGAAACAGATTCATCGATTTTATTAAAAGATGATGACGGACGAGAAATAAAACTTAAATTACTTAAGAATCCGATTAATATTGAAAATCTTATTTGTGAATATGAAGATGATACAGAAATAAATCTATCCACGGAGTCTAATGTGTTGTCTGATAAAGAATTAACTATGTACCGAAAGAAAAAAAATGGAAAAGAAAAATTAACTACCATTTCCATGTTAGAAGAACCTTTGCCACTAAATGATATACCAGATCCAAAAAACAGTACTAAATCGGTTGTGTATAATGTGAAAACTATTAAAGGTAGACAGTATGGTAACTTAAGAAAAAGGAATTCTTCCGATTATCATACATGGAAGCAAAACGCAATAACTCTCATTGAATTTTCGACCGTGTACCCTTTCATTCATGCAAGTAATAAATATAAATGCTTTGTTTGTGCTAAAGCGTTCTTGGAGGCAGCTCACTTAAGAGAGCATTCGGCTGAGTATCATACAATTAAGGATTTCAGACAAGAACTAAGTAACAGAGTCCGAGATAAGAATCTAAAAGTAGATGTAACATTTATGCACTGTAAAATATGCCGAGCAGTTTTTCCTAATATTCAGTGGTTAAAAGTGCACCTGAAAAATCATGGAAAAAAGATTGATCCCGATTTTCAGGATAATATAATCCCTTTCAAATTAGGATGTGAAAATTTCCAATGTCAAATATGCAATGAAACCTTCCACAAACTACGTTTACTAATAATTCACATGAGCAAGCATTTTAATAACTACAGCTGCGAAGTATGTGGTTCCGTTTTTATTTCTTTACATCTTCTAAAAAGGCATTTACAAACGCACAAAGTGGGTAATTATCCTTGTGAAATATGTGACAAGGTTTTTAGTAACTCTGCTAAAAAAACGATGCATATGAGAGGAGTGCATTTAAAGCAATATCCACGGACATGCCCGATTTGTCCAGAGAGATTCAATTCGAACTATCAGAGAACAAAACACTTAAGGATTGTCCACAATCAAAGTTCTAAATTATTTAAATGCGAAACTTGTGGGAGGGAATATGATCTAAAATATCAGTTATTGGTACATATAAGATCTGTTCACATGCAGGAGAGGAATCAAGAATGTAGTATTTGTCATTCGCGGTTTTTCTCGAAGTATTGTTTGTCCAGACATATGGTGATTCATACGGGCGATAAAAATTATAAATGTGAGATCTGTGGTAAAAGTTACGCTAGAAATAAGAATCTGAAGGAACATATGAAGTCTCATGACGTACAGGAGGTATCTTCGATATGTGGTGGAGTTTATAGTGACCATACGACTTTAGCCGCACATCTAAACAGCTCTCATGAAGTACTTGACTGA
Protein Sequence
MDSISTEKQTPPKRIIPLFQVAYDRSLCKPLGTVTAFRKLRLKNKSKMPSPPAVRNYTPSRSPSPVSLGDRSPTPVQTLPSVIPTPKVLKKQADYRQNALTVFEFSTVYPFIYGNNKFKCFVCSQPFLETSLLRQHMNENHTFAPIKRLLNNRRENVLKVDVGELMCKLCSVKPKDLLQLKFHLKEDHQKPIDPDLQDNMIPFKLEEEDGSYKCVICDQLFIKVRILVIHMSVHFNNYSCEICGSGFMTLRLLKKHLEVHETGNFPCDRCNKVFSTTHKRSLHIRGVHLKQYPRRCPICPERFNSNYRRTIHLQDVHNQSTRVHKCETCGRGFNLKYHLICHTRSVHLQERNHQCKVCLQRFCNKETLKRHMVIHTGIIVETDSSILLKDDDGREIKLKLLKNPINIENLICEYEDDTEINLSTESNVLSDKELTMYRKKKNGKEKLTTISMLEEPLPLNDIPDPKNSTKSVVYNVKTIKGRQYGNLRKRNSSDYHTWKQNAITLIEFSTVYPFIHASNKYKCFVCAKAFLEAAHLREHSAEYHTIKDFRQELSNRVRDKNLKVDVTFMHCKICRAVFPNIQWLKVHLKNHGKKIDPDFQDNIIPFKLGCENFQCQICNETFHKLRLLIIHMSKHFNNYSCEVCGSVFISLHLLKRHLQTHKVGNYPCEICDKVFSNSAKKTMHMRGVHLKQYPRTCPICPERFNSNYQRTKHLRIVHNQSSKLFKCETCGREYDLKYQLLVHIRSVHMQERNQECSICHSRFFSKYCLSRHMVIHTGDKNYKCEICGKSYARNKNLKEHMKSHDVQEVSSICGGVYSDHTTLAAHLNSSHEVLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01080089;
90% Identity
-
80% Identity
-