Basic Information

Insect: Ithomia salapia
Gene Symbol: -
Assembly: GCA_028829205.1
Location: JAPOND010000109.1:261883-268943[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.92 9.1e+02 0.7 0.1 19 26 78 85 73 90 0.88

2 18 0.042 41 5.0 1.5 17 30 145 159 136 168 0.75

3 18 0.0085 8.3 7.2 2.3 6 38 163 195 160 196 0.74

4 18 0.04 39 5.1 3.6 5 34 190 215 188 229 0.81

5 18 0.0012 1.2 9.9 4.3 18 38 230 251 223 255 0.90

6 18 0.015 15 6.4 0.5 16 32 256 273 252 280 0.76

7 18 0.02 20 6.0 2.4 6 33 271 302 269 308 0.71

8 18 0.01 10 6.9 3.9 5 38 302 335 299 336 0.77

9 18 0.0015 1.4 9.7 0.9 5 38 330 363 326 370 0.85

10 18 0.09 89 3.9 5.3 10 38 363 391 357 397 0.81

11 18 0.039 38 5.1 5.3 13 38 393 419 386 425 0.81

12 18 0.12 1.2e+02 3.5 1.5 6 30 415 439 414 449 0.72

13 18 0.0018 1.8 9.4 3.1 17 38 453 475 442 476 0.81

14 18 0.011 10 6.9 3.2 7 33 472 498 470 503 0.76

15 18 0.0076 7.4 7.4 3.5 6 34 499 527 496 538 0.80

16 18 0.00032 0.31 11.8 4.1 6 38 527 559 524 560 0.87

17 18 0.016 16 6.3 0.5 19 38 567 587 561 587 0.93

18 18 4.1 4.1e+03 -1.4 1.0 17 29 626 638 615 650 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.92	9.1e+02	0.7	0.1	19	26	78	85	73	90	0.88
2	18	0.042	41	5.0	1.5	17	30	145	159	136	168	0.75
3	18	0.0085	8.3	7.2	2.3	6	38	163	195	160	196	0.74
4	18	0.04	39	5.1	3.6	5	34	190	215	188	229	0.81
5	18	0.0012	1.2	9.9	4.3	18	38	230	251	223	255	0.90
6	18	0.015	15	6.4	0.5	16	32	256	273	252	280	0.76
7	18	0.02	20	6.0	2.4	6	33	271	302	269	308	0.71
8	18	0.01	10	6.9	3.9	5	38	302	335	299	336	0.77
9	18	0.0015	1.4	9.7	0.9	5	38	330	363	326	370	0.85
10	18	0.09	89	3.9	5.3	10	38	363	391	357	397	0.81
11	18	0.039	38	5.1	5.3	13	38	393	419	386	425	0.81
12	18	0.12	1.2e+02	3.5	1.5	6	30	415	439	414	449	0.72
13	18	0.0018	1.8	9.4	3.1	17	38	453	475	442	476	0.81
14	18	0.011	10	6.9	3.2	7	33	472	498	470	503	0.76
15	18	0.0076	7.4	7.4	3.5	6	34	499	527	496	538	0.80
16	18	0.00032	0.31	11.8	4.1	6	38	527	559	524	560	0.87
17	18	0.016	16	6.3	0.5	19	38	567	587	561	587	0.93
18	18	4.1	4.1e+03	-1.4	1.0	17	29	626	638	615	650	0.73

Sequence Information

Coding Sequence: ATGGGCGTGGAGGGCGCCGTGGTGAAGATCTCGACGGGGTCGGAGCACGACCTGCACGCAATGTACAAGGTCAACGTCGAGGACCTGTCGCAGCTACTGGCCTACCACGAGGTGTTCGGGAAGCTGAACACCGAGGGACAGCCGCAGGCCAAGGTGCTGAGCGAGGCGGAGGTGGAGGCGGGGTCGAGCGCGGCGCTGGCGGACGCCGAGTCGTCTCCCGGACATCACTCCTGCGACATCTGCGGCAAGATATTCCAGTTCAGATATCAACTCATCGTGCACAGACGTTATCACGGCGAAAGTAAACCGCACACGTGCCAAGTTTGCGGATCTTCCTTTGCGAATCCCGTCGAGCTGTCCAAACATGGAAAATGTCACCTTGCGGGAGACCCTGCGGAGCGACAAGCCAAGCGCCTGGCTCAGGACAAGCCCTACGCCTGCTCCACCTGCCACAAGACCTTCTCGCGCAAAGAACACCTCGACAACCACGTCAGGAGTCACACCGGGGAGACTCCCTACAGATGCCAGTTCTGCGCAAAAACGTTCACTCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACACCGCACCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGGTCCCATACGAACGATACTCCCTTCAGATGCGAACTGTGCGGGAAATCATTCACCAGAAAGGAACACTTCACCAATCATATATTGTGGCACACCGGCGAGACTCCTCACCGCTGCGACTTCTGCTCCAAGACCTTCACCCGCAAAGAGCATCTCCTGAACCACGTGCGCCAACACACGGGCGAGTCTCCTCACCGCTGCAACTACTGCGCCAAGTCCTTCACCCGCCGGGAGCACCTCGTCAACCACGTGCGCCAACACACGGGGGAGACACCCTTCCAGTGCGGGTACTGCCCCAAGGCGTTCACGAGGAAGGATCACCTCGTGAACCACGTGCGTCAGCACACGGGAGAGTCGCCGCACAAGTGTTCCTTCTGCACCAAGTCCTTCACCCGCAAGGAACATCTCACCAACCACGTGCGCCAGCACACCGGCGAGTCGCCCCACCGCTGCGTGTACTGCTCCAAGTCCTTCACCAGGAAAGAACACCTCACCAACCATGTCAGGCAGCATACGGGCGAGACTCCTCACAAGTGCACGTACTGTCCGCGCGCGTTCGCGAGGAAGGAACATCTCAACCAGCACGTGAGGCAGCACGTGGGCGACTCGCCGCACACCTGCTCCTACTGCCAGAAGACCTTCTCCAGGAAAGAGCATCTCGTTACCCACGTCCGACAGCACACGGGTGAGACTCCATTCAAGTGCACGTACTGCGCCAAGTCGTTCAGTCGCAAGGAACATCTCACGAACCACGTGCATCTGCACACGGGCGAGACGCCACATAAGTGTGCTTTCTGCACGAAGACGTTCTCCAGAAAAGAGCACTTGACCAACCATGTGAGAATACACACAGGTGAATCTCCACATCGTTGTGAGTTTTGTCAAAAGACATTTACTCGCAAGGAGCATTTGACAAATCACCTCAAGCAACATACTGGAGACACGCCTCACGCCTGCAAAGTGTGCTCAAAGCCATTCACAAGAAAAGAACATCTTGTTACTCACATGAGGTCGCACAGTTGCGGCGAGCGACCTTTTAGTTGCGGCGAATGTGGTAAATCGTTCCCATTAAAGGGTAATTTATTATTCCACGAACGATCTCACAATAAGAGCAACGCCGCCAACAAGCCCTTCCGATGTGAAGTGTGCTCTAAGGAATTTATGTGTAAAgGTCACCTAGTAACCCATCGACGAACTCACAATGCTAATGAAGCCGCGACAACCGATCCCGCGCCCGAAGTAGAGGACTGCGGAGATTACGAAAAGTGCGACAAGGATGGCGAAAGACCCGAACGAAAACATGAAATTagaACATCAGTTGATAACAGAGCTACAGAAACTTCTGTGACAGTAAATCAGCAATCAAATACAACGGTTATGCAAATCACTAGccaaGAAGTCCGAACTGGAAATGCGACAGGCGCTGCATCGGTCGCCGGTACCTTCACGCATACGAGCACTCACCACTCCGGCGCGATAGCACAGCATCCCGTCACTGTCAACTACTAG
Protein Sequence: MGVEGAVVKISTGSEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQPQAKVLSEAEVEAGSSAALADAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPHTCQVCGSSFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCVYCSKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNQHVRQHVGDSPHTCSYCQKTFSRKEHLVTHVRQHTGETPFKCTYCAKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSNAANKPFRCEVCSKEFMCKGHLVTHRRTHNANEAATTDPAPEVEDCGDYEKCDKDGERPERKHEIRTSVDNRATETSVTVNQQSNTTVMQITSQEVRTGNATGAASVAGTFTHTSTHHSGAIAQHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842865;
90% Identity: iTF_00842865;
80% Identity: iTF_00842865;