Ipal000928.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- Hr39
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000036.1:91583-95016[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.089 6.3e+02 -0.8 3.5 46 113 214 285 120 333 0.66 2 4 1.2e-08 8.4e-05 21.8 0.0 1 28 403 430 403 465 0.78 3 4 0.19 1.3e+03 -1.9 0.0 83 115 461 493 426 515 0.68 4 4 9.5e-73 6.7e-69 232.9 0.1 205 408 535 733 474 733 0.96
Sequence Information
- Coding Sequence
- ATGGCCGCAGACATGAGGTCACCGAACGTATCTGTCACCCCTATAAATATGGAACCACCCCCATatccaataacaacaaattgtgaTTTACCAACATTGGTAACAGGTGAACCACAACGTACCCGAAGTGCTCCACATCCTGGTCTATTGACAAATGGTGATGTCTTGGATAGTTCAGCGGATGCTGAAGTGGcacaaattgattttcaatgtGCTGTTAATATGCGACATAAAAAGAAACGggatggtaatggtggtggtggtagtggtggtggtagtgatgTACCAAGGCCTATGTCATGGGAGGGTGAATTATCGGATAATGAACGAGATATGTGTATTGATGATGGGTCTCAgGTACCTGagaatttatcattatcacaaccaaaattgaatacaactacaacaacatgTAGTTTAGATTCAAAAGAAAGTCCAATATTGAGACTGAAACAACCACcaattggtaattattcatTACATAGTACACCAAGTAATTCACCATTATTAAGTCAACGACATCCATGTACTGGTATACCAATAATAAGTCATAAAGATATTATGCATAAAGCATTAAATGTACCACCAACACCAAGTCCAGATTCTGCCATACATTCAGCATATAGTGTATTCAGTTCACCAAATCAAAGTCCATTAACACAACGACATATAACATTAACACCGAATTTAAGTCGAAATAATAGCGATGCATCACATTCAAGTTGTTGCAGTTATTCGAGTGTTTCAGTTTCTGTATCACCGACACAACAATTCTCACCTACGCATAGTCCTATTCAGGGTCGCCATATGCACAATATCCATAATAGTCCTTTACATCACAATGTATTATATAGAAGTTTACAAGAAGatcaaacaattcaatataatcCTGATCATGATGGTCTTGATGATGTTGAAGATAAGACTGGTTTAGTACatacaacatcatcattaccaGCCCAACCGGGTATATCGcgacaacaattaattaatagtcCATGTCCTATATGTGGTGATAAAATATCTGGCTTCCATTATGGTATATTTAGTTGTGAATCATGTAAAGGTTTCTTTAAACGTACAGTacaaaatcgtaaaaattatGTATGTTTACGTGGTGCTGCATGTCCTGTTACGGTTGCAACTCGAAAAAAATGTCCAGCTTGTCGATTCGATAAATGTCTACAATGTGGAATGAAACTTGAAGctATTAGAGAAGATAGAACTAGAGGTGGACGATCAACTTATCAATGTTCATATTCTTTACCACCGTCATTAACAAATCATTCAGAATTACGTGCTAGTACCACTGATTTACGCCAGAATATTGGGGATCAATCGCATGGTTTAACTGTGAAATTGGAACCTGGTGATTCGGGTTTATCGCATCATAAACGTTGTGGAACTGTGCCTGGTTCGAAAGGTGTCCCAGCATTATTGCAAGAAATAATGGATGTGGAGCATCTGTGGCACTATAATGAagttgaattgaataaattgagtACTGAAGGACATTTAGGTAAAGAAGGTACTAGCGGAGCCGTCCACAATCTTTCCAATCATCCACTTCTAGTCGGTACAGCATTAGCCGGTTCAACCGATACGAATCCtgattttgttgcaaatttgTGCAATATAGCCGATCGGAgactttataaaattgttaaatggTGTAAAAGTTTGCCATTATTCAAGAACATATCGattGACGATCAGATTTGTTTGTTGATCAATTCCTGGTgtgaattattgttgttttcatgTTGTTTTCGATCAATGTCAACACCTGGTGAAATTCGTGTATCTTTAGGTAAAAGTATAACATTAAATCAAGCTATTGATATGGGCATGCAGGCATGTATAGAACGTATGTTGAATTTTACGGAACAATTGAGACGATTAAGGGTTGATCAATATGAATATGTTGCCATGAAAGTTATTGTTTTACTAACATCAGaTACATCAGGATTACGTGAAGCGGAAAAAGTACGTGCTTCACAAGAGAAAGCTTTAAAAGCTCTACAAGATTATACGTTAAGTCATTATCCGGATAGTCCGGCGAAATTTGGTGAATTATTGTTACGTATTCCGGAATTGCAACGGACTTGCCAGgTGGGAAAGGAGATGTTGACGATCAAGTCGAAGGACGGTGACGGTCCCAGTTTCAATCTTTTAATGGAACTCCTACGAGGGGATCACTAG
- Protein Sequence
- MAADMRSPNVSVTPINMEPPPYPITTNCDLPTLVTGEPQRTRSAPHPGLLTNGDVLDSSADAEVAQIDFQCAVNMRHKKKRDGNGGGGSGGGSDVPRPMSWEGELSDNERDMCIDDGSQVPENLSLSQPKLNTTTTTCSLDSKESPILRLKQPPIGNYSLHSTPSNSPLLSQRHPCTGIPIISHKDIMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNIHNSPLHHNVLYRSLQEDQTIQYNPDHDGLDDVEDKTGLVHTTSSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHSELRASTTDLRQNIGDQSHGLTVKLEPGDSGLSHHKRCGTVPGSKGVPALLQEIMDVEHLWHYNEVELNKLSTEGHLGKEGTSGAVHNLSNHPLLVGTALAGSTDTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQAIDMGMQACIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSGLREAEKVRASQEKALKALQDYTLSHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753059;
- 90% Identity
- iTF_00987169;
- 80% Identity
- iTF_00841922; iTF_00841876; iTF_00841887;