Ipal001920.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- lilli_1
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000097.1:21316-32896[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 2.1e-05 0.3 9.9 23.0 29 229 9 208 3 219 0.47 2 8 4.1e-09 5.8e-05 22.2 15.6 349 492 241 416 228 423 0.62 3 8 0.19 2.7e+03 -3.1 5.2 142 253 434 542 413 556 0.47 4 8 1 1.4e+04 -7.0 15.5 66 213 573 725 562 753 0.43 5 8 1 1.4e+04 -8.9 26.4 439 486 753 798 739 810 0.55 6 8 1 1.4e+04 -6.3 14.8 96 217 935 1011 894 1039 0.31 7 8 1 1.4e+04 -9.9 28.6 79 247 1101 1275 1079 1320 0.38 8 8 0.18 2.5e+03 -3.0 1.4 147 173 1510 1533 1432 1583 0.38
Sequence Information
- Coding Sequence
- ATGTCTTCTTCACAAGTTGAAGAACAAGAATATCATCTGTTTGGAGCACCCTTTAGGGTGAACCCATCGTCGACGGATCCCGTCACACAGGACATCCAGAGCAAGTTGGGGGATTTTCAACGATTGAAACCATTTCTTGatcaaaaagaattaattggTGTCGATGGAGTACCACCAAGTCCTGGTGTACCTTCTGCGTTATCTTCATCACGTCATCATCCATTCGCCTCAGCAGCACCAgcatcagcatcatcatctGGGGCGGCCAGTTCGAGattacATCCATCACCTGAATCACGGCCTGAATTTAAGAAACCACACCATCATCACTTACACCATTCTTCCTcctcctcatcatcatcatcatcgtcacaTCAACGTGGTGGTTATGTGAAACCGACTGATGGTAAACCACCATACGAGGGACGTGGTGGTTATCCTGGACAACCAGTGAAACATGGTAGTGGTATAACAAATCATAGGTCAAATGGTATTTTACCAGCAAAAGGACCACCTCCATCATCGCcaaattcttcttcttcgtcaaGAATACACTcaagtagtagtaatagtagtagtaataataataatggtgcaTCATCGTCTTCAAGGAATCAGTCTCGTATTTCTCATGAACAAaatCAGGGACCTCCTCCTGTACTACCACCTCTGGCGGCTGGACCGAGAGAAACTTTACCGTCTGCAACACCTAATCCTGATATGGAAAATATCTTCAAGGAAATGATAGAAGTCCGACCACCACTCACTGCCATAGCTGCAACACCTCGGATAGAACCAGATAATAAGTTTACCTTCAATCCTGTATTAACTAagTTGACggatccaacaacaacaacaacaacaataataataccaacacCATCaactccaccaccaccaaaaaAACGTGAACGGGCAACAGCAAGTGTTCGACCGTCAACTGACTTAAGAGATGATCTCAACCTGtctgatgatagtgatgatgaacAAAAACGTGAATCTCTACAATCTTCCAAGTTACCAATAGAAAACTCAAGAATGGTGTCCCCATTAGTGGCAACATCAAGTAgtaattttcaacaagaatCAACAAATGTGGCAACCACAACACCAAcgacatcaacaacaaccatcacaaCATTACCTagaaatggtggtggtggtggtagctCATCAAGTGATTCGTGTTCCGATTCTGGTACAGAAAGTGAGACAAGTAGTGATGAttcaattgaagaaaatgtttcatcatcaaattcaacaattaaaaaacaaattggtggtggtgattctatacaatcaacaacaacaacaacatcaccaccattattaccagcacaacaaattgaagaaaaagacAAGAAACGTTGGAATTTAGGTTCATATCTTGATCAAAATAgtgttaataacaataatagtaaaattgattcaatcaaTCGATCCCCAAAAGTGCTCTCACCATTAACATGTGGCAGTAGTAGTATGCTTCcattaaataatcataataatagtaaatgtaatgataataaaagacaACGTGGTGGTGTTATTGAAGAGTCTGATGGTAGTAGTGATTCGATAAAAGATTTAGATAGTGTCGTTGCTGAAGCattaacatcaacaacagTGCCGTTATTATCTAGTTTTTCGGATTCTGACAGTTGTAATGaggatgataatgatgatgatgatgatgatgataatgatgatgataacaatgatggTAATCATAAACGAGTGAAAAAATCTAAACGTACAGTGCCAGTTACCAAAAATTTAGatagtgatagtgatgatgataatgatgaaaggacgagtagtaataataataatcataataagaAACCAAAACCAATAACAAGACCAAGTCCAAGGACTAAAAATATAGATACTAGTGATTCTGATattgatcatcatcattatcatcataaaaCCAGTGCCAATAATGTAAAACCATCAataatcacaacaacaacatcaacgccaatattgaataataataaaaatagtgacAAATTATTAGTGAAACCAAAATCAAATCGTGGTAGACCACGTAAAGTTAAACCATCAGATGGTAATTCAGATGGTGAAAttcgtattaataataaacgacGTGGTAGGccaccattatcatcaaaaaagCGTCGATCCTCCCCAACACTACCTAGTGGTTCAGATATTGAAATGACAACTGGTAGTAGTACAGTGACacgtgttaataataatattattaataataataatagaaataagaAACGTGGCCGACCACCGAAGCCACGACCATTATCACCACCAAATTGTAGTGGCACTAGTAGCACTAGTGGCAGCAGCAGTAGCAGCAGCAATAGTAGCAGTAGTGGTACCAGTAGTAGTGATAGtagtagtgatgatgataatgttggtgattataataataagcaaaaatCAAGACGTCGTAGAATATCAAAAGTGGAAATCACATCAACATGTAGTAGTGATACAGATTCATGTCATCGGTCACaagcaattaaaattaaagataaatataataataataataacaacaaaaaagtgaatgataataataatagtaatagtaaacATAAATCACCAAGATCGGtggttgatgataataataaattaataaagaaaattagaaatcgTTCagacgatgataatgatgatgatgaatggGGTAAACAGAATAAGAACAAATTAAGAAATCTAGATATTgttaataagaaattaataGATCCATCAAAGAAAAAGGAGAGTTTTCGACGTAAATCACGTAGAACATCAATAAGTGCTGCaacattaccaacaacaactgatACCAGTGATAGTGAACACAatacaactactactactagtacaGGTGGTATTGCTGCTACCACAgttaaaactaataataatcataaatcaaaaatctacaaaaGTGATAGTGAttcaaataatcatcaatcggatgatagtgatgatttGCATCGTAGAAAAtcagaaataacaacaacaacaacaacaacatcaataacaacaacagcaatgaAAGTCGATgagaataattcaattaaagataaaaagaaaagtgaTACATTACGTAAATTGTTTACAATGAAACGTGGTGATAcagatggtggtggtaaaggTGGCGGTAAAGGTGGCAAAGGTGGTAAAGGTAAAGGTGGTGTTAATGTCATTTATGCTGATGAGGAACGGAACAATTGTATTTATGAACGTAGTAGTTCATCAGTTGatgatgaaacaacaacaccaataataccaacaaatccaacattattatcaccgataccaacaaaaaatcatGAATTACCATCAATAATCAAATCTTCAAAGactgaatttaataataataataataataataataataataataatagtaataataaagaaaatcaattattatcatcaaaacattcaatgaaaattataattgatttgaatCGTATCGATATAAATCggataaaaaatttaaagagaCATTTAGAAGAGTTACGGCATCcgtatttaaaagaaattgataagaaaatgatATATGCACCACCATCGAAACAACCATTTCGTGAAAGTGATAATGAAAAtactaatactaataataataatagtaataaattatggaaaaatgaTAGTAATGATTCTATAGAAAAtcggaaaaaatcaaaaaaacgtAAACGACGTAATAGTTCAAgttcaatatcatcattatcaacgaTTAGTAATATGTCACatacaagtaataataaaaaattagaaaataataataataatcagaatattaaaaataatcgaaaagataataatcataaaacgAAACGACGAAAagatgatattaataatacaaaaacaccaccaacaaatcATGATCGGGaagataatggtaataataatttcaataataataataataatcatcctCATCATCGACAACAATTAGGTGAAACAAAACCACAAATCATCAGGGAGTATTATTCGTATTTTGAAGAGGAACCTGTCGATAGGGAGGAAAggGATCAAAGTCAGTATCTGAATGATGCAACAAGATTAAAACATTTAGCTGATCGTGAGACtgatacaacaaaacaatgtaTGTTATATTTAAGGGCTGtattatatttcttattaACTGGGAATGCAATGGAGAAGACTAGAGTGACTGAGAATTCATGTTTTACAATGTACAAAGAAACACTTTCATTAGTTaggtatatTTCATCGAAATTCCGAAATCAAACGAATACATcaccaaaacaaaacaaattggCTGTTTtaagTTACCGTTGTCAAGCTCTTcttcattataaattgttcaaaatgaGAAAATATGAAGCTAAAGAAACACAGAAGATAATTCAGGaatattttagtaataaaCAAATGCCAACGATACCTCCGcctgaacaacaacaacatccccAACAAATGAttaatagtggtggtggctgtagtagtggtggtggtggtggtcaaggtacaccatcaccattatcaccaACCCCATCACCAGCTGGTTCAGTTGGTTCAGTTGGTAGTCAATCATCTGGTTATAGTAGTGGTGAATTGGCAGCACGTAGTAGCAATAATATaactaatattaataataatacagttcCTTTAGTACATAcaacacaaatacatacaacacCAAATACGAATACCactaataatacaacaacaacaacaacaccacatATGTGGATACCATTAAATGTCTATAATGCAATGTATAAACAGAATCAAAATTATACATATCTGATATCGTGTCAGGATTTGTGGGATACAGCAGATACTTTAGTTAAAAATGGTGAACATACTGATTTCTTTATCCAATTGGATCGTCGATGTAAACCATTAACAATGCACAGTTCGTTACAACACTTGgtattttatatacaagaaGGTATAAAACGACTTAATGAAAGTTAG
- Protein Sequence
- MSSSQVEEQEYHLFGAPFRVNPSSTDPVTQDIQSKLGDFQRLKPFLDQKELIGVDGVPPSPGVPSALSSSRHHPFASAAPASASSSGAASSRLHPSPESRPEFKKPHHHHLHHSSSSSSSSSSSHQRGGYVKPTDGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPPSSPNSSSSSRIHSSSSNSSSNNNNGASSSSRNQSRISHEQNQGPPPVLPPLAAGPRETLPSATPNPDMENIFKEMIEVRPPLTAIAATPRIEPDNKFTFNPVLTKLTDPTTTTTTIIIPTPSTPPPPKKRERATASVRPSTDLRDDLNLSDDSDDEQKRESLQSSKLPIENSRMVSPLVATSSSNFQQESTNVATTTPTTSTTTITTLPRNGGGGGSSSSDSCSDSGTESETSSDDSIEENVSSSNSTIKKQIGGGDSIQSTTTTTSPPLLPAQQIEEKDKKRWNLGSYLDQNSVNNNNSKIDSINRSPKVLSPLTCGSSSMLPLNNHNNSKCNDNKRQRGGVIEESDGSSDSIKDLDSVVAEALTSTTVPLLSSFSDSDSCNEDDNDDDDDDDNDDDNNDGNHKRVKKSKRTVPVTKNLDSDSDDDNDERTSSNNNNHNKKPKPITRPSPRTKNIDTSDSDIDHHHYHHKTSANNVKPSIITTTTSTPILNNNKNSDKLLVKPKSNRGRPRKVKPSDGNSDGEIRINNKRRGRPPLSSKKRRSSPTLPSGSDIEMTTGSSTVTRVNNNIINNNNRNKKRGRPPKPRPLSPPNCSGTSSTSGSSSSSSNSSSSGTSSSDSSSDDDNVGDYNNKQKSRRRRISKVEITSTCSSDTDSCHRSQAIKIKDKYNNNNNNKKVNDNNNSNSKHKSPRSVVDDNNKLIKKIRNRSDDDNDDDEWGKQNKNKLRNLDIVNKKLIDPSKKKESFRRKSRRTSISAATLPTTTDTSDSEHNTTTTTSTGGIAATTVKTNNNHKSKIYKSDSDSNNHQSDDSDDLHRRKSEITTTTTTTSITTTAMKVDENNSIKDKKKSDTLRKLFTMKRGDTDGGGKGGGKGGKGGKGKGGVNVIYADEERNNCIYERSSSSVDDETTTPIIPTNPTLLSPIPTKNHELPSIIKSSKTEFNNNNNNNNNNNNSNNKENQLLSSKHSMKIIIDLNRIDINRIKNLKRHLEELRHPYLKEIDKKMIYAPPSKQPFRESDNENTNTNNNNSNKLWKNDSNDSIENRKKSKKRKRRNSSSSISSLSTISNMSHTSNNKKLENNNNNQNIKNNRKDNNHKTKRRKDDINNTKTPPTNHDREDNGNNNFNNNNNNHPHHRQQLGETKPQIIREYYSYFEEEPVDREERDQSQYLNDATRLKHLADRETDTTKQCMLYLRAVLYFLLTGNAMEKTRVTENSCFTMYKETLSLVRYISSKFRNQTNTSPKQNKLAVLSYRCQALLHYKLFKMRKYEAKETQKIIQEYFSNKQMPTIPPPEQQQHPQQMINSGGGCSSGGGGGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELAARSSNNITNINNNTVPLVHTTQIHTTPNTNTTNNTTTTTTPHMWIPLNVYNAMYKQNQNYTYLISCQDLWDTADTLVKNGEHTDFFIQLDRRCKPLTMHSSLQHLVFYIQEGIKRLNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -