Iinq018591.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ischnus inquisitorius
Gene Symbol
-
Assembly
GCA_963924025.1
Location
OZ001255.1:415499-420207[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 6 5e+02 1.8 6.7 2 23 235 257 234 257 0.96
2 21 0.06 5 8.0 3.0 1 23 327 349 327 349 0.97
3 21 0.005 0.41 11.4 0.8 1 23 398 420 398 420 0.98
4 21 0.00059 0.049 14.3 0.4 3 21 475 493 474 494 0.94
5 21 0.074 6.1 7.8 3.5 1 23 506 529 506 529 0.97
6 21 9.7 8.1e+02 1.1 6.5 2 23 535 556 534 556 0.96
7 21 0.11 8.9 7.2 0.1 3 23 596 617 594 617 0.85
8 21 2.2e-05 0.0018 18.8 0.1 1 23 623 645 623 645 0.97
9 21 3.4e-06 0.00028 21.4 3.0 2 23 683 705 682 705 0.96
10 21 0.024 2 9.3 0.9 1 23 711 734 711 734 0.97
11 21 4.9e-05 0.0041 17.8 0.1 2 23 742 764 741 764 0.95
12 21 0.0024 0.2 12.4 0.6 3 23 774 794 772 794 0.92
13 21 0.027 2.3 9.1 0.1 2 20 863 881 862 881 0.95
14 21 0.017 1.4 9.8 0.1 2 23 901 922 900 922 0.96
15 21 5.5e-06 0.00046 20.7 1.3 2 23 943 964 943 964 0.96
16 21 1.8e-05 0.0015 19.1 0.2 1 20 989 1008 989 1010 0.94
17 21 0.048 4 8.4 0.8 2 23 1063 1085 1062 1085 0.94
18 21 0.019 1.5 9.6 0.9 3 23 1104 1125 1103 1125 0.93
19 21 0.93 77 4.3 0.4 1 23 1132 1156 1132 1156 0.97
20 21 0.13 11 7.0 0.0 1 23 1161 1184 1161 1184 0.95
21 21 0.0027 0.22 12.3 0.2 2 23 1219 1241 1219 1241 0.96

Sequence Information

Coding Sequence
ATGGACGAGACGTTGGACGTACGAAATGTCGAGAATCTTTGCAGACTGTGCCTTTCGACCGACGAACCGAGATCCTCGATATTCGTCGAACGCGCCACGACGACACTGTCGCTCGCCACGAAAATCCACAATTTCTTGTCCATCGAGatcCTAGCGAGCGATAAATTGTCGACGTCGATATGCGTCGAATGTCTGACCCGGATCAACAAATGGCAATCTTACAAGGAATCGTGCCTACGCTCTCaggaaaaattgcaaagatGCCTTACGGAACGCTCCGAGAGTACGCCTCACGTCCCGAACATCAAGACCGAGCCAATGGATTTCGACGAGCCGCCCGGTTCGTTGGAAACGGTGCCGCTGACCTCGGACGACGAATGGGAGAGCACAGTCGAGGATCGCGCCGGGACCGCCGAGGTGACGGTCTGCGTGAGCTCGGAGAAGCCGATATCGCCGCGCGACAGTTTAACGATAAAGCGCGAGGCGCTCGAGGACGAGGAGAATCAGAACACGGAAATAGAGTCGATATGCAGCACGGAGCTTCTCCTCAATCCGATGGCGGTGGGGACGACGAAGGAGGATCGCATAATGGAAGCCGACTCGACGCAGAAGCTCTACAACCCGAAGAGCCTGCGcggcaagaagaagaagctccGTCGCGGTCCGGCGACGCACTATCGCGGCGCGAGAAAGTTCAAGCAGCGTTGCAGCTTCTGCCAGATATACCTTCACTCGAAGCACAGCTACAAGAAGCACATGGAGCGTTTTCACAGCGGCAAGAAGCCGGAAGCGAAGCCGCAGATCGCGAAGAAGTTGGTCAGCGTCGCGTCCGTCCCGTCGGTATCGAAGAAATTCGCCGACCCTTCGATCGGAGAGATCGAGGAAATGATCGAGGACGTCGAGGAGGAGCTGATAAGCTTGGAGAAGGACGCCCCGTTGACGCCCGTGCAGCAGAACATAATAAGCCAATTGAAAACGTTCTCGTGCTACTCTTGTCAACAATTTTTCAGCGATCGTCGCAGCACGCTCAATCACATACGTCAGCACATGCCCGATCTGAGGCCCTACACGTGCATAGCGTGTCTGACGGAATTCGCCGATCGTTCGATCTACAAGCTCCATTGCGGCGCGTCGTTCCAATGCGCGATGAAAATAGCTCTCGTCGTTCCCGAACACGGCACCGAGAAGTATTTCACCTGCAACATGTGTCTCCGACCTCTGTCGAACAGAAAGGAACTGCTGAGCCATTTGTCGAGACACTCCGACAAGCAGTACGAGCAATTGGTCGGCGGAGGATTTCGCTCGCCGCCGAAACTGAAGCCGATGGCCTCGATTCCGGACGCCTCGAGGAGGTCCCGCGAGGCGTTCGTCAATCGCATTCCAGTTCCTTACATGAACGGCGATCCGTCGCGCAACAATCTCTGCGACTATTGCGGCATGATATACAAACACAAGCCCAATCTGACGAAGCATCGCGAGATGTGCAAGAAATTGTCGCCGGACGAGCGCGTGTGCTATCGCTGCGTCCACTGCGGCGCAACTTTCAGCGCGTTCTACAAATTTCACGGTCACGTGAAGACCGTGCACAAGAAGCGCGAGCTCGTTTGCTCGCACTGCTGTCTCTCGTTCAAGGAATCGACCGATTATCTCGAGCATCATCGACAGCATCGCGCGCGAGACAACCGTAGCGTCGCCGACGTCTCGGAACGCGGACGGAAGATGAAGTGGGAGAGCAACGCGAAAGAGTCCGAGGATGATTTCGTCGCATCGCTGAATCGCTGGAGCTGCGCCCTCTGTCCGGAGAGCACGTTTTCGACGAAGGCGCAGCTCGCGGAGCATCGGAAGGTTCACCTGAAGTTGAAGATCTATTCGTGCTCGATTTGCCGACGCATGTTCGGGCGCGCTTCGGCCCTCGAGGCTCACATGGCCGAGCACGACGCGTCCGAGAGTCCGGCGAACATTTCCCAACCGGCGATCGCGATAAAGCGCGACGACCCCAACGCGAGCAAAGATTCGATCAACTCCGATCCCGGCCTCGGCAGCAGCGAGTGTCACACTTGCGGCAAGGTCTTCGCGAGTTATCACAATCTTCGTCGTCACGTGCGCAACGTTCACGAGGCGCCGGGACGCTACAGTTGCTTCTCGTGCGCGAAGAACTTCAAGACCGAGGAGCATTGGATCGAGCACGTCGAGACGGAGCATCGTCACTTCGAGGGCTCGATACGCTGTCCGCAGTGCACGGAGACGTTCGACACCGCGGAAAGCCTGACGGCCCATCGTCGCGAGATCCACGGCGCCGAGGGCGACGACCCTCTGGCGTGTTACATATGCGGAAAGGTCTTCCAGACCGTGACCTCCCTGAAGATCCATCGCGGACATCATTTCCGCGTTAACTCGAGACTCAGCATCGGAAAAATCGCCTCCAACGAgccgagaagaaacgaaatcgaggacgacgacgatccgATCTCGATAGGCCCGACAGTGGTGCCACCTGTGACGCCCAAACCTCCGCAACTTCCGGTCAAAGTGCCCAGAGCGAGAAAATCCTTTCCCAACAGCCCAGCCCGACAATTGCAAGTGCTGCAGTGCCAGGTCTGCGACGATCGCTTCAACGACGTCGCCAATCTGCGGAAGCACCTCTGGGACGTTCATTGCGCGCGCAACAAGCCCGAGAAACCCTTTCAGTCGGTCAAGCTTCAGTGCGAATTGTGCACCAACGTGCTGCCGGACGAGGAGAGTCTGCGCAGCCACATGAAGTGGCACGAGAGCAATCCCATACTCGGCAACAGCGTCGTCACCAAAAGAGAAGCGATGGCGCCGGCCGAGTGCGACATATGCGGAAAGTTCTACAGCTCCTACAGCAACCTCAAGAAGCACAAGGAACGTCACAAAGTGCGGAATCATCCCACGGTCGGGGAAATCCCGCGCAACGCCAGAGGCGGACGATGGGGCGGCGACGGTTTCACCTGCGGCGATTGTCAGAAGGTCTTCGCGACGAATTCCACGCTGAGCAAGCACCGAGAAGTCTGCACGATGGCGCATCGCGCCGCCGGCAATAGTCCGGCGAAAAGGCCGCGAGACGCGCAAGTGATTCATCCCGTCAGACCGAAATTCGACTTCGATCAGATCGTCGATCGGGCAAACAGTGCCTTCCGGAACGGCGACGAGTCCAAGAAGCCCGTCACCTGCAATCTCTGCCGAAAGATCCTGCCGAGTCGCGCGGAGCTTCACAAGCATCGCGTCAGAGTCCACAAGGTCACCAACGGCGACGACGTCGATCTCTACGGCGCCGCCGCCGGCGTTGCCTGCACCTCCTGCGACAAACTCTTCTCCAATCTGGCGAACATGAAGCAACACTTCACGAAAGTACACGCCGGCACCGCGCCGAGTTACCCGTGCAGCGTCGACGGCTGTCGCATGCTCTTCCGGACCTACGCGGCGAAGCGCAGTCACGAGAAGACTCACGCCAGCCTCATGTTCGCCTGTCCGGTTTGTCAGAAACGAATGCCCACGCGCGCGGCCATCAACGAGCACATCGAGCGCGAACACAGAGCCAACAGTTGCGCGACGAACGCGAGGCGGCCCGAGAAAGCCAcgaatttcaagaaaatcgatCTGGACAATTACGTCGTTAAGGGAGCGAACGGCAGGCAATGTCCGCTGTGCAAGATCACTTATCCGAACTACAAGGCATTGAAGATCCACTATCTGAAGGTGCACGAGAATGTCGCTTAG
Protein Sequence
MDETLDVRNVENLCRLCLSTDEPRSSIFVERATTTLSLATKIHNFLSIEILASDKLSTSICVECLTRINKWQSYKESCLRSQEKLQRCLTERSESTPHVPNIKTEPMDFDEPPGSLETVPLTSDDEWESTVEDRAGTAEVTVCVSSEKPISPRDSLTIKREALEDEENQNTEIESICSTELLLNPMAVGTTKEDRIMEADSTQKLYNPKSLRGKKKKLRRGPATHYRGARKFKQRCSFCQIYLHSKHSYKKHMERFHSGKKPEAKPQIAKKLVSVASVPSVSKKFADPSIGEIEEMIEDVEEELISLEKDAPLTPVQQNIISQLKTFSCYSCQQFFSDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSIYKLHCGASFQCAMKIALVVPEHGTEKYFTCNMCLRPLSNRKELLSHLSRHSDKQYEQLVGGGFRSPPKLKPMASIPDASRRSREAFVNRIPVPYMNGDPSRNNLCDYCGMIYKHKPNLTKHREMCKKLSPDERVCYRCVHCGATFSAFYKFHGHVKTVHKKRELVCSHCCLSFKESTDYLEHHRQHRARDNRSVADVSERGRKMKWESNAKESEDDFVASLNRWSCALCPESTFSTKAQLAEHRKVHLKLKIYSCSICRRMFGRASALEAHMAEHDASESPANISQPAIAIKRDDPNASKDSINSDPGLGSSECHTCGKVFASYHNLRRHVRNVHEAPGRYSCFSCAKNFKTEEHWIEHVETEHRHFEGSIRCPQCTETFDTAESLTAHRREIHGAEGDDPLACYICGKVFQTVTSLKIHRGHHFRVNSRLSIGKIASNEPRRNEIEDDDDPISIGPTVVPPVTPKPPQLPVKVPRARKSFPNSPARQLQVLQCQVCDDRFNDVANLRKHLWDVHCARNKPEKPFQSVKLQCELCTNVLPDEESLRSHMKWHESNPILGNSVVTKREAMAPAECDICGKFYSSYSNLKKHKERHKVRNHPTVGEIPRNARGGRWGGDGFTCGDCQKVFATNSTLSKHREVCTMAHRAAGNSPAKRPRDAQVIHPVRPKFDFDQIVDRANSAFRNGDESKKPVTCNLCRKILPSRAELHKHRVRVHKVTNGDDVDLYGAAAGVACTSCDKLFSNLANMKQHFTKVHAGTAPSYPCSVDGCRMLFRTYAAKRSHEKTHASLMFACPVCQKRMPTRAAINEHIEREHRANSCATNARRPEKATNFKKIDLDNYVVKGANGRQCPLCKITYPNYKALKIHYLKVHENVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397507;
90% Identity
-
80% Identity
-