Iinq002448.1
Basic Information
- Insect
- Ischnus inquisitorius
- Gene Symbol
- KLHL12
- Assembly
- GCA_963924025.1
- Location
- OZ001244.1:9832890-9834834[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-24 7.5e-22 77.8 0.0 4 106 21 125 19 129 0.94 2 2 4.8 1.2e+03 -0.1 0.0 86 109 137 160 127 161 0.84
Sequence Information
- Coding Sequence
- ATGGGCTTGCCGTGCGACTGGCAGAGTACCAAGCAGAGGGTCTCACAGAGAGGAAAGTATCTTCTCGAAACCGGACAATGGTCCGATTGCAAATTTATCGTCGGCCAAGAGCCCCAGCAACAGATACTGGAGGGTCACAAGCTCTTCCTCGCGATGTCGAGTCCTGTATTTGAGGCAATGTTCTACGGTAGTATGGCGGAAAAGAGTGATCCGATACCGATACGCGATGTACAACCGGAGGCTTTCAAGACGCTTCTCGAGTACATATACACGGATCACATCGATCTGGAGTCGTTCGAGCTCGCTTGCGAATTGTGCTACTGCGCCAAAAAGTACATGCTACCATATCTAGTTGAAGAATGCACAAAGTATCTGTGGTCCGATCTTTCGCCGAAGAAAGCTTGTCGAGCGTACGAATTCGCCAAGCTCTTCGAGGAGCCGGTATTGTTGGAAAAGTGTTTACAAATAATATGCACAAAGACCGACGAGATACTGAAAGAATCGAGCTGGGACGAAGTTGAGATCGGCACGATATCGACGGTATTCGATCAGGACGAATTGCGCATAGACTCGGAAATGGAATTGTTCGAGGCTGTTGAGCGTTGGGCGAAAGCCGAATGCAATCGAAAATCGCTTCTACCCACGGATCCGAAAGCCCTGAGATCGGTGACCGGCAATCTTGTGGAAAAAATACGATTCTTGACACTGACGCCCCAACAGTTCGCCGAAGGTTCTGGAAGATCTCAACTCTTGACTCGAGACGAGGCTTTCGCTATTTTGATGAACGTTTCCTCGAGCGGCAGTGACATTCCTATGCCCGAAGGATTTTCGACCAATGCGCACAAACGAAGGAATTTCAAGCTCAAACCAAAGTTTCAGAGTCGTTATCAACGCAATCCGTCAGATTGGAGTTGGAACGCCGATCCTCTACTCTCACCGCCAATACCCGGATACTTGCCTATGCCGAGCGGTCGTAGTTTCTTCGGCAGTCTCGACGAGAGTACGAGTTACGCTCTCAGACCAGAATCTATTGCGTCGCCTCGTCACTCGACCTCCATGCTGGAACCGCCGAGAATTCCTCCCGAAGCTGCAATACGAGACGGTAAAAAGTATTATTGTCGTAGAGCAATAAGTCAGAGTACCGTTTGCTTGAACAGCAGCGTTTTGGATTGCTCCGTTACCTTCAaagttgataaaaatatttgcgtCATCGGCGTTCAAGTACCGACGCAAATCGCTTACCCACCGATCCTACATTCAACTCCGGTTTACACGGAAATATTGTACGCACACCTTCTCGACGCTGATGGCTCGAGACTCACCTATGCACACTTTACGACCACTGCCAGGTGCGACAACTTCGTTGAGATTGGATTCAATCGACCTGtctacatacaaaaaaataaaATTTACAGAGTAGGCGTTGTATTCAACAAAGCCGGAAGATATCCCAGTGGCGATTGCGCCAAGGAAACCCGCTGTGACACCGTGAACTTTGTATTCGGCGGTGGTAGGAGCGCGGAAAGCGTCCGTGACGGTCTCATAAGATCGATCGTATTCACGTATCACTGA
- Protein Sequence
- MGLPCDWQSTKQRVSQRGKYLLETGQWSDCKFIVGQEPQQQILEGHKLFLAMSSPVFEAMFYGSMAEKSDPIPIRDVQPEAFKTLLEYIYTDHIDLESFELACELCYCAKKYMLPYLVEECTKYLWSDLSPKKACRAYEFAKLFEEPVLLEKCLQIICTKTDEILKESSWDEVEIGTISTVFDQDELRIDSEMELFEAVERWAKAECNRKSLLPTDPKALRSVTGNLVEKIRFLTLTPQQFAEGSGRSQLLTRDEAFAILMNVSSSGSDIPMPEGFSTNAHKRRNFKLKPKFQSRYQRNPSDWSWNADPLLSPPIPGYLPMPSGRSFFGSLDESTSYALRPESIASPRHSTSMLEPPRIPPEAAIRDGKKYYCRRAISQSTVCLNSSVLDCSVTFKVDKNICVIGVQVPTQIAYPPILHSTPVYTEILYAHLLDADGSRLTYAHFTTTARCDNFVEIGFNRPVYIQKNKIYRVGVVFNKAGRYPSGDCAKETRCDTVNFVFGGGRSAESVRDGLIRSIVFTYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397443; iTF_00398222; iTF_00059571; iTF_00721379; iTF_00905529; iTF_00652956; iTF_00343301; iTF_01207493; iTF_01364775; iTF_00058829; iTF_00058066; iTF_00629230; iTF_00414449; iTF_01497593;
- 90% Identity
- -
- 80% Identity
- -