Iinq007374.1
Basic Information
- Insect
- Ischnus inquisitorius
- Gene Symbol
- lola
- Assembly
- GCA_963924025.1
- Location
- OZ001247.1:11732041-11736096[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-16 2.4e-13 49.8 0.0 2 42 382 423 381 437 0.96
Sequence Information
- Coding Sequence
- ATGTCTATGCAACAATTCTGTCTACGATGGAATAATCATCAGCCAAACTTCATATCGGTATTCTCGTCATTGTTGAACAATGAGACTCTGGTAGACGTCACATTGGCAGCGGAAGGACGTCATCTTCAAGCTCACAAGGTCGTACTATCGGCGTGCAGCACGTACTTTCAGTCACTTTTCACTGTCAATCCCTGCCAACATCCAATCGTCATTCTCAAAGATGTCAAATTCTCGGATCTTAAGATTATGGTGGATTTTATGTATTACGGCGAAGTCAACGTCTCGCAGGATCAGTTGCCGTCGATAAtaaagACGGCCGAAAGTTTGAAGATCAAAGGTCTGGCGGAGATGCACACAGCCTCGTTGACCAAATGGCCAAGCGGGAGCAGCGAGCCCGGCGGGGGCGATCGCGGCGAGTCGTGCTCGCCGAGTCCGTCGCCCCTCTCGCCGTCCTTTCGTCGCAAGCGTTTGCGAAAAACCTCGACCGGCTCGACGTCGGCGGGCTCGGCCGACAAGCCCGAGGAAATGAACGAGATAACCCTCGTCGCCACGAATATCGTGAAACCCGAGCCGCACATCGTCTCTCAGGAGAGCGGCGAGAATCTCAGACGTCCCATGAACACGACCACGGAATCCCAAGGCAGTATTGACGAGGACCAGATATCGATTaTGAGCAACATGGAAAGCAGCGCAGCGACGACGCCGGCCCAGAGCGAAGGTTCTCTGCAAGAAGTGAGCCAACAATCCGGTGGAAATCTTGGCCAGAGTTCCGTCTCGTCGCAACCACCGGCTCACCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCGCGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCTTCGTCGGCGTTCACGACGCCCGAAATAACAGCAACATCGAGCATCAGCGAGCATCAGTACCAGTCGGCGGGCGGTACGAGTACAACGACAGCCTCGAATTGTGCCCTGACGAGTTATCCGAATTCCTCGTCGCACGGGCCGTTGCAGCACGCATCGAATTCGAGCGGTCCATCGCCGACCTCGCAATGCCCGAGCAATTGTCAGAGTCCATGCGCGAGTCCCCAGACGACGATAAAGCGAAAGAGATCGACGAATCCGCAGGCGGATGAGAATTTCATTCGGGCCCTCGAGGCGGTGCGTTACGGTGGTATCGGCTTCTGCAAAGCCGCCCGAATGTTCGGTGTGAACAATCGAACACTGTGGCTCGAGTACAAGAAGCGTGGCTACCCGAACAATCGTCCGAGCTTAAAGTCCCGCGTTAAGCAAGAAGTGAACACGTCCCCGCCGCCAGCACCGTCGTCGCAACCGGTCAATTCGCAAAGCCCGACGCCGATGGGCCCGCCGACGACACCGCACAGTACTCACAACACACATCCGACCCACACGATGCTAACGGCTCACACACCCCACACAATGCTCTCGGGTTATATCGATAGCAGGCACACGGATTATTCGCTACCGAGCACGACGATGCCGATTAACTTGCACGGCGTCAATTACAACTCGATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSEPGGGDRGESCSPSPSPLSPSFRRKRLRKTSTGSTSAGSADKPEEMNEITLVATNIVKPEPHIVSQESGENLRRPMNTTTESQGSIDEDQISIMSNMESSAATTPAQSEGSLQEVSQQSGGNLGQSSVSSQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITATSSISEHQYQSAGGTSTTTASNCALTSYPNSSSHGPLQHASNSSGPSPTSQCPSNCQSPCASPQTTIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNTSPPPAPSSQPVNSQSPTPMGPPTTPHSTHNTHPTHTMLTAHTPHTMLSGYIDSRHTDYSLPSTTMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00963108;
- 90% Identity
- iTF_01497564;
- 80% Identity
- iTF_00841187;