Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963924025.1
Location
OZ001255.1:4001997-4004983[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.4e-14 7.2e-11 42.2 12.9 2 59 92 149 92 155 0.94
2 3 0.00038 0.33 11.3 1.2 26 62 130 166 128 167 0.91
3 3 3.6 3.1e+03 -1.5 0.2 35 48 221 234 218 239 0.74

Sequence Information

Coding Sequence
ATGAGTGCTCTGAAGAGCGTCATAATAACATTGCCTAAGAGCCTAACCAAGGCTCCGGGTGGCGTGAACACTTGCGAATTGAGGGCGAACAACAACAACGCGAGCCTGAATTTCACCACGTCCATACTCGCGACGAGAAACACCAACAACATGGTCGAGTGCAGAAAACCGGTGATGAAGCAATTGGACGACTCGATGTCCATGGACGAGGATCTCGCGAAGCCCGACGGATGGCTGAGAGGAAAGAAACGCCGATTGGATCATCTCACGtgggaagaaaaattacaGCGAAAGAAGCTGAAGAATCGCGTAGCAGCCCAAACATCGAGGGACCGTAAGAAGGCGAAATTGGACGAGTTGGAGGACACAGTGAGGGCGTTGCGGGACAGCAACGATCTGTTGACCGAGGAATGCGCGATGCTGCGATCGCAGAACGAGAGTTTGCTGATGGAATCCAAAAGACTGAGGATCGAGAGAGACGAAGCTAAAGCGAGCTTGGCGATACCGACGGACGAGCGTTACTGCTCGACCTGGTGGGGCAGCCCAGCCGGCATTGTGCCCGACAGCGTTGAGCCCAAACGCCTCGATAATCCTGAAGATCATGACTCTCTACCTCCTCTCGAGGAACTGTTCGGCGAGCTCCAAGGCGACGACTACATCGAACGACTCGAGGAACTCGCCGAGAGCCTTCTGCGAGAAGTTACCGCAGAAGTGGAAGCAAGTTCTGGTAGAACAAATGAACAGATCACGATCAAGCAAGATACCGCTGAAGAATCTAACGATCCAGAAGGAATGGTGGGGCCGGCACCAGAAAATGTGGAAGCCCGTGCAGCCGTCGAAGGCCTGAACAACGCTTACAACCACAGTCATCGGCTCGTCGTGCCGCCGACCTTGAAAGTGGTCTCGCCATCGAACAGCACGAAGACGAAAACGATCGCGCGCGTTGCGCCGACCGCGACGAGCAACAATTCCACGGGTGCTCGTCAAGCGTCGCGCATCCCCGATATCGTCAAATCACCGAGCGTCTCGTTCAAGCGCGAGATCGAGGTGAAGGACGAACCGAGCAACGACAACATGGACACCGTTTACGGCACTTACGACGAGGCGACGAATTGCATAACGATCATCTATcccggcgacgacgacggcgtcCGAATACAAGAGTGCGTTCAGGAAGTATCGAGCACCGACAACGCGGACAGCGTTATCGGCAACGCGAACAATCGCAGAAATTCGACGAGCAAGAGCAATTATCTTCTGTCGCCGGCGTACACCTTCACGGATTCCATCTCATCGCCGTCGAGCATACATTCCGACGACTCGGAAATCGGCATCGCGAATTCTTACAAATTGGAGCAATCGAGCCTCTCGGACTGCGGCTACGAGTCTCACGACTCCGCGAACACGAATTGCGCCAACGCCGCGAACGGCGCGGCCCTCACGGATCTTTGGCACGAAAGCTTTTCCGAATTGTTTCCGAGTTTGGcgtga
Protein Sequence
MSALKSVIITLPKSLTKAPGGVNTCELRANNNNASLNFTTSILATRNTNNMVECRKPVMKQLDDSMSMDEDLAKPDGWLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRALRDSNDLLTEECAMLRSQNESLLMESKRLRIERDEAKASLAIPTDERYCSTWWGSPAGIVPDSVEPKRLDNPEDHDSLPPLEELFGELQGDDYIERLEELAESLLREVTAEVEASSGRTNEQITIKQDTAEESNDPEGMVGPAPENVEARAAVEGLNNAYNHSHRLVVPPTLKVVSPSNSTKTKTIARVAPTATSNNSTGARQASRIPDIVKSPSVSFKREIEVKDEPSNDNMDTVYGTYDEATNCITIIYPGDDDGVRIQECVQEVSSTDNADSVIGNANNRRNSTSKSNYLLSPAYTFTDSISSPSSIHSDDSEIGIANSYKLEQSSLSDCGYESHDSANTNCANAANGAALTDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397031; iTF_00397815;
90% Identity
-
80% Identity
-