Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_963971235.1
Location
OZ020232.1:27786581-27788459[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.72 1e+03 0.9 0.0 16 56 42 82 40 87 0.86
2 4 7.5e-14 1.1e-10 42.4 12.6 2 59 90 147 90 153 0.94
3 4 0.00054 0.76 10.9 0.8 26 61 128 163 126 165 0.90
4 4 4 5.7e+03 -1.5 0.2 35 48 219 232 216 237 0.74

Sequence Information

Coding Sequence
ATGAGTGCTCTGAAGAGCGTTATAATAACATTGCCTAAGAGCCTCGCCAAGGCTCCGGGTGGCGTGAATACTTGCGAATTAAGAGCAAACAACGCAGACTTGAATTTTACAACGTCCATATTGGCCACAAGAAATACCAATAAAATGGTTGAATGCAGAAAACCGATGATGAAGCAGTTGGATGATTCGATGTCGATGGATGAGGATCTCGCGAAACCCGATGGATGGTTAAGAGGAAAGAAACGGAGATTGGATCATCTTACGTGGGAAGAAAAATTACAACGAAAGAAGCTAAAGAACCGAGTAGCAGCGCAAACATCGAGGGATCGTAAGAAAGCAAAACTGGACGAGTTGGAGGACACAGTGAGAGCATTGAGAGACAGCAATGATCTGTTGACGGAGGAATGCGCGATGCTGAGATCGCAGAACGAGAGTTTGCTGATGGAATCCAAAAGACTGAGGATAGAGAGAGACGAAGCTAAAGCGAGTGTAGCGATACCGACGGACGAGCGTTATTGTTCGACATGGTGGGGCAGCCCAGCCGGCACTGTCCCCGACAACGTTGAGCCCAAACGCCTCGATAATCCTGAAGATCATGACTCTCTACCTCCTCTCGAGGAACTGTTCGGCGAACTCCAAGGCGACGACTACATCGAACGACTCGAAGAACTCGCCGAGAGCCTTTTGCGAGAAGTTACCGCAGAAGTGGAAGCAAGTTCTAGTAGAACAAATGAACAGATCACGATCAAGCAAGATACCACTGAAGAATCTAACGATCCAGAAGGAATGGTGGGGCCGACATCAGAAAATGTGGAAACCCGTACAGCCGTCGAAAGCCTGAATAACGCCTACAATGAAAATCATCAGGTCGTTGTAGCATCGAGCTTGAAAGTTGTATCGACCTCACCATCGAATTGCACGAAGACGAAACCAGTCACAAGCGTTTCCCAAACGACGACGAGTAACTCCTTGGGTTCTCGGCAAATTTCCCAAATCTCCGATATCGTAAAATCGCCAAATGTATCGTTCAAACGCGAAATCGAAGTTAAGGAAGAACCGAACAACGACATGGACACCGTTTACGGTACTTACGACGAGGCAACAAATTGCATAACGATAATATATCCCGGCGACGACGACGGGGTGAGAATACAAGAATGCGTACAAGAAGTATGCAGTACCGATAATACCGACAATACTCTCGGTaccctgaaaaataaaaaaaattcaccgaacAACAATTATCTCCTATCGCCGGCTTACACTTTCACGGATTCTCTCTCATCGCCGTCGAGCATACATTCCGACGATTCGGACGGTGGAATCTCAAATTCGTACAAATTGGAACAATCGAATCTTTCCGATTGCGGCTACGAGTCCCACGACTCGTCGCCGCGCGCGCATGTCGTCAGCAACGAAAAATGTCCAAACATTGCCGCGAATGCTAACGCTAATTGCGTCAACAACGCTAACGGCGGAGCACTCACGGATCTTTGGCACGAAAGCTTTTCCGAATTATTTCCGAGTTTGGCGTGA
Protein Sequence
MSALKSVIITLPKSLAKAPGGVNTCELRANNADLNFTTSILATRNTNKMVECRKPMMKQLDDSMSMDEDLAKPDGWLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRALRDSNDLLTEECAMLRSQNESLLMESKRLRIERDEAKASVAIPTDERYCSTWWGSPAGTVPDNVEPKRLDNPEDHDSLPPLEELFGELQGDDYIERLEELAESLLREVTAEVEASSSRTNEQITIKQDTTEESNDPEGMVGPTSENVETRTAVESLNNAYNENHQVVVASSLKVVSTSPSNCTKTKPVTSVSQTTTSNSLGSRQISQISDIVKSPNVSFKREIEVKEEPNNDMDTVYGTYDEATNCITIIYPGDDDGVRIQECVQEVCSTDNTDNTLGTLKNKKNSPNNNYLLSPAYTFTDSLSSPSSIHSDDSDGGISNSYKLEQSNLSDCGYESHDSSPRAHVVSNEKCPNIAANANANCVNNANGGALTDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00840807;
90% Identity
iTF_00397815;
80% Identity
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