genemark-scaffold_77-processed-gene-13.14-mRNA-1
Basic Information
- Insect
- Ischnura elegans
- Gene Symbol
- Bgb
- Assembly
- None
- Location
- scaffold:1300375-1303547[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-22 2.8e-18 66.7 0.0 91 132 131 172 120 178 0.91
Sequence Information
- Coding Sequence
- ATGTATGCTCTTACGGCAGTGGCCTGTGAAGGGATGTGGGTGGGGGAAACCGCCCCTCCCTCCGTAATTTCTAGAATTGGAAACAAGGGGGTTGGTGTTCTCATAAGGGTGAGTATCTCATTAGCCCCCAGGGGGAGGGCAGGAAATCAACTTCCCCCTTCAACCCCTTCGGCCCCCAACTACCCTCCAATACGGGTTTCTCGCCCCGTACAGGGTCTTGTGCCCTCCAAGTCCTCCCTCGCAGGTCACTTCAGCCCTTCACGACGTGAAAACTTAACCCCCGGCTTCCACCGTACACGGGGCAAGAGAAAATACCTCATCGGAGAGAGAGAGAGCTCTCGTACGATGTTTTTTTTTTCAACTTACTTTGATCTTTTTTTTTGTTCCCCTCCTTTGCAGGTCCATCTTCGATCGAGTTTCATCATGAACGGGGTTTGCGTGCGGTGGAGAGGTTGGATTGACCTTGAAAGGCTGGACGGGGTCGGCTGTCTCGAGTATGACGAGGAGAAGGCACAGGTGAGATGGGTTCTCTTGTGTTTTAAAGGGTGGGGGTTGGGTGGACTGCTTCCTCCGACGAGGGCATGGAGGGGTTGTTTTCGTGTGGTGGTTGTGCTTGTGTGTGACCGGGTTGATGAGGAGAAGGGTGGGCTAGCGGATAGGAGAGCGGAATGGACAGCTGCGACAAACCAATCCTAG
- Protein Sequence
- MYALTAVACEGMWVGETAPPSVISRIGNKGVGVLIRVSISLAPRGRAGNQLPPSTPSAPNYPPIRVSRPVQGLVPSKSSLAGHFSPSRRENLTPGFHRTRGKRKYLIGERESSRTMFFFSTYFDLFFCSPPLQVHLRSSFIMNGVCVRWRGWIDLERLDGVGCLEYDEEKAQVRWVLLCFKGWGLGGLLPPTRAWRGCFRVVVVLVCDRVDEEKGGLADRRAEWTAATNQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -