Basic Information

Insect: Iphiclides podalirius
Gene Symbol: -
Assembly: GCA_933534255.1
Location: OW152822.1:5043925-5058673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6.1e-05 0.0051 17.4 2.2 1 23 432 454 432 454 0.97

2 20 0.0038 0.31 11.8 0.5 1 20 460 479 460 482 0.94

3 20 1.6e-05 0.0013 19.3 5.6 1 23 501 523 501 523 0.98

4 20 0.00014 0.012 16.3 4.7 1 23 529 551 529 551 0.99

5 20 2.8e-05 0.0024 18.5 5.3 1 23 557 579 557 579 0.97

6 20 2.5e-05 0.0021 18.7 7.9 1 23 585 607 585 607 0.97

7 20 7.4e-07 6.2e-05 23.5 2.7 1 23 613 635 613 635 0.97

8 20 7.8e-05 0.0065 17.1 6.7 1 23 641 663 641 663 0.97

9 20 2.1e-05 0.0017 18.9 6.5 1 23 669 691 669 691 0.98

10 20 3.7e-07 3.1e-05 24.4 1.9 1 23 697 719 697 719 0.98

11 20 3.6e-05 0.003 18.2 7.7 1 23 725 747 725 747 0.98

12 20 6.1e-06 0.00051 20.6 6.6 1 23 753 775 753 775 0.98

13 20 5.5e-06 0.00046 20.7 4.1 1 23 781 803 781 803 0.98

14 20 5.5e-05 0.0046 17.6 6.2 1 23 809 831 809 831 0.97

15 20 4.7e-05 0.0039 17.8 4.0 1 23 837 859 837 859 0.97

16 20 1.2e-05 0.001 19.7 5.7 1 23 865 887 865 887 0.98

17 20 1e-05 0.00085 19.9 6.3 1 23 893 915 893 915 0.97

18 20 4.9e-06 0.00041 20.9 3.1 1 23 921 943 921 943 0.96

19 20 0.00056 0.047 14.4 0.3 1 23 950 972 950 972 0.96

20 20 0.0034 0.28 12.0 4.5 1 23 982 1004 982 1004 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6.1e-05	0.0051	17.4	2.2	1	23	432	454	432	454	0.97
2	20	0.0038	0.31	11.8	0.5	1	20	460	479	460	482	0.94
3	20	1.6e-05	0.0013	19.3	5.6	1	23	501	523	501	523	0.98
4	20	0.00014	0.012	16.3	4.7	1	23	529	551	529	551	0.99
5	20	2.8e-05	0.0024	18.5	5.3	1	23	557	579	557	579	0.97
6	20	2.5e-05	0.0021	18.7	7.9	1	23	585	607	585	607	0.97
7	20	7.4e-07	6.2e-05	23.5	2.7	1	23	613	635	613	635	0.97
8	20	7.8e-05	0.0065	17.1	6.7	1	23	641	663	641	663	0.97
9	20	2.1e-05	0.0017	18.9	6.5	1	23	669	691	669	691	0.98
10	20	3.7e-07	3.1e-05	24.4	1.9	1	23	697	719	697	719	0.98
11	20	3.6e-05	0.003	18.2	7.7	1	23	725	747	725	747	0.98
12	20	6.1e-06	0.00051	20.6	6.6	1	23	753	775	753	775	0.98
13	20	5.5e-06	0.00046	20.7	4.1	1	23	781	803	781	803	0.98
14	20	5.5e-05	0.0046	17.6	6.2	1	23	809	831	809	831	0.97
15	20	4.7e-05	0.0039	17.8	4.0	1	23	837	859	837	859	0.97
16	20	1.2e-05	0.001	19.7	5.7	1	23	865	887	865	887	0.98
17	20	1e-05	0.00085	19.9	6.3	1	23	893	915	893	915	0.97
18	20	4.9e-06	0.00041	20.9	3.1	1	23	921	943	921	943	0.96
19	20	0.00056	0.047	14.4	0.3	1	23	950	972	950	972	0.96
20	20	0.0034	0.28	12.0	4.5	1	23	982	1004	982	1004	0.99

Sequence Information

Coding Sequence: ATGAATCCTGAACACCATAATATAAATACGGGTGGTGGCCAACCTTCTGGCAACGCAGAGACACAGAATCAAAGAGTTACTTCTGCCCAACAACAACAACAGTCAGCAAATAATCTAACACCTACAACATCAGCTACCGACCTACGGGTTAATTCGGCTGCAGTGAATGTTGCATTGTCAAGCGTGGCCAAGTATTGGGTGTTTACAAATTTATTTCCTGGTCCAATACCCCAAGTGTCTGTATACGGTTTACCAACAAACACGAGGATTGAAAATGGAAAACCTGTGCAGGACCTAGGTCAAACGCATGCAGGACTTCTAAATGGTGATCCCAACATAATTCTTGGTCAACATACAGGACAACCTCAGCTTTCTGTTTCTGGACCTAGTGGCCAACAAATACCTGTCACACAAATTATTGCAACTCAATTGCAATCTGGGCAGACTCATGAATCACTGGTGGCTCACAATCAGCAACAAGACCTTGGTACTCAACAAAACCCTGGCAATGGCACACAGGTCTCTGTTAGCACAGGCCAGCCGACTCATCAGCAGGTACCCAATAACAGGGTCGAGTTTATTCAACACCATAACATTGATATGGTAAATCATGTGGGTCATCACTCCCAACAACATTCAATGCAGCAGCAACTTATGACGGCTACCCGTCAGGACCATGCTAACCAACAGATTCAGCTAACGGTCAGTGAAGATGGCATAGTGACAGTGGTGGAGCCCGGTGGAGGAAAACTAGTAGATAAGGAAGAACTTCATGAAGCTATTAAAATGCCCACAGACCATACACTCACAGTCCACCAATTACAACAACTTGTTGGCCATCATCAGGTAATTGACAGTGTAGTCCGTATAGAACAAGCCACAGGAGAGCCCGCAAACATACTGGTTACTCAGAATCCAGATGGAACCACATCAATTGAAACTAGTGCTGCAGAGCAACTCATAGTGAAGGATGAAAAAAATGTATCTAAAATAGAATCCGCCCAATTTGCAATACCTACTGATATAAAAGATATCAAGGGTATTGACTTAAAGGCTGTAGGTGCAATGGGTATGGAAGGAGCTGTAGTGAAAATCTCAGCAGGCGCCTCAGAACATGACCTTCATGCAATGTACAAAGTAAATGTAGAAGATCTTTCTCAACTGTTGGCATACCATGAAGTGTTTGGTAAGCTGAACCCTGAGGGTCAGCAACAAGCCAAGGTTATCAGTGAAGTTGAAGTAGAAGCAGGCACTAGTGCCGCCATTTCAGAAACGGACTCTTCTCCCGGCCACCATTCTTGTGATATCTGTGGGAAAATATTTCAATTTCGTTACCAATTGATTGTTCACAGACGCTACCATGGCGAGAGTAAGCCGTACACTTGCCAAGTTTGCGGTTCAGCATTTGCAAATGCTGTAGAATTATCAAGGCACGGGAAATGCCATCTTGCTGGTGACCCAGCAGAGAGACAAACCAAAAGATTAACTCAAGACAAACCCTATGCATGTACAACTTGCCATAAAACATTCTCACGCAAAGAGCATCTTGACAACCATGTTAGAAGCCACACTGGAGAAACTCCTTATAGGTGTCAATTCTGTGCTAAGACATTCACACGTAAAGAGCATATGGTGAATCATGTCAGAAAGCATACTGGGGAGACACCACATCGTTGTGACATCTGCAAGAAGAGCTTTACAAGGAAAGAACACTTTATGAACCATGTAATGTGGCACACAGGTGAAACGCCGCATCATTGTCAAATGTGTGGCAAGAAGTATACTAGGAAGGAGCATTTAGTCAACCATATGAGATCTCATACAAATGACACACCGTTCCGATGCGAATTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTACACCAATCACATACTGTGGCATACGGGCGAGACGCCGCATCGCTGCGACTTCTGCTCGAAGACCTTCACCCGCAAGGAGCACCTGCTGAACCACGTGAGGCAGCACACGGGCGAGTCGCCCCACCGCTGCACCTACTGCTCCAAGTCCTTCACGCGAAGGGAGCACCTGGTCAACCACGTGCGCCAGCACACCGGCGAGACACCCTTCCAGTGCGGATACTGTCCCAAAGCGTTCACCCGGAAGGACCATTTGGTGAATCATGTTCGCCAACATACGGGGGAGTCGCCACATAAGTGTTCGTTTTGTTCGAAATCTTTCACTCGGAAGGAGCACTTGACGAATCATGTACGACAACATACCGGGGAATCCCCGCATCGCTGCACTTACTGCGCGAAGTCTTTCACTAGAAAAGAACATCTCACAAACCATATCAGACAGCACACTGGCGAAACTCCACACAAGTGCGCGTACTGCCCGCGCGCCTTCTCGCGCAAGGAGCACCTGAACAACCACGTGCGGCAGCACACCGGCGACGCGCCGCACTCTTGCTCCTTTTGCAGCAAGAGCTTCACGCGCAAGGAGCACCTCATCAACCACGTCCGACAACATACGGGCGAAACGCCGTACAAATGTACTTACTGTGCAAAGGCATTCGCCCGAAAGGAGCATCTGACAAATCATGTGCATCTTCATACTGGTGAAACTCCACATAGATGTCCCTTCTGCACTAAAACCTACTCCAGGAAGGAACATTTGACCAACCATGTCAGGATACATACCGGGGAATCACCTCACAGATGCGAATTTTGCGACAAAACATTCACAAGAAAAGAACATCTCATCAACCACTTAAAACAACACACAGGGGATACTCCTCATGCCTGCAAAGTCTGCTCCAAGCCTTTTACAAGAAAGGAGCACCTTGTAACTCATATGAGAGCACACAATTGTGGAGAACGGCCGTTTAGTTGCGGGGAATGTGGAAAATCATTCCCATTGAAAGGCAACTTGCTATTCCATGAAAGATCGCATCAAAAAGGCGGCGGTGGAAATAGACCATTTAGATGTGATGTTTGTTCGAAGGACTTCATTTGTAAAGGGCATTTGGTATCACACCAGCGCACTCACGCGGCGACGGGTGAAACTGCGGCGAATAATGAACAAGCTGCCGACGTCGAGCAATGCGGTGATTGTGACAAGGATAACAACACTGAGAGGACAGAACGCAAACATGACATCAGAGTAGTTAATGAAAATCGACCGGCAGAAGAGGATGTCACACAAAATTCTCAAAATAACACAGTTATGCAAATAAGTAACCAGCAAGTTCGCACTGGATCCGGATCAAATGCATCTAGTGTAACGACCTTCACCCACACAACAAGTACGCAACATCACGCAGGCAACGCGATTTCCCATCATCCCGTCACCGTCAATTACTAG
Protein Sequence: MNPEHHNINTGGGQPSGNAETQNQRVTSAQQQQQSANNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTNTRIENGKPVQDLGQTHAGLLNGDPNIILGQHTGQPQLSVSGPSGQQIPVTQIIATQLQSGQTHESLVAHNQQQDLGTQQNPGNGTQVSVSTGQPTHQQVPNNRVEFIQHHNIDMVNHVGHHSQQHSMQQQLMTATRQDHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQLVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAAEQLIVKDEKNVSKIESAQFAIPTDIKDIKGIDLKAVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNPEGQQQAKVISEVEVEAGTSAAISETDSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSRHGKCHLAGDPAERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQMCGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCSKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCAYCPRAFSRKEHLNNHVRQHTGDAPHSCSFCSKSFTRKEHLINHVRQHTGETPYKCTYCAKAFARKEHLTNHVHLHTGETPHRCPFCTKTYSRKEHLTNHVRIHTGESPHRCEFCDKTFTRKEHLINHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRAHNCGERPFSCGECGKSFPLKGNLLFHERSHQKGGGGNRPFRCDVCSKDFICKGHLVSHQRTHAATGETAANNEQAADVEQCGDCDKDNNTERTERKHDIRVVNENRPAEEDVTQNSQNNTVMQISNQQVRTGSGSNASSVTTFTHTTSTQHHAGNAISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: iTF_00204511;
80% Identity: -