Ipod005559.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- -
- Assembly
- GCA_933534255.1
- Location
- OW152818.1:15655639-15657665[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-08 0.00013 21.9 0.0 18 40 42 64 34 68 0.86
Sequence Information
- Coding Sequence
- ATGGAGGATAATCGGAACAAGTCCGGAAAGTCAAATAAAAGGAAAATGAAGGGCGAGAAACGCAGAAATTATGACTCTTCACGCTTCAAGGAGTCTTATATGAAAGTTATAAAGGATAATTGGTCAGTGTACAAGGCGTCGAAGGAATATGGCATACCGTGGTCTACTTTGAGAAGACACATAGCTACTCATGGAGGTGAAAGTTTCGACTTACCTAAACTTGGGAGACCATTCACATTAGACAGCGACCTTGAATTTTTCTCTTTACTTTCCGTTCCTGAGGTACCACAGTCTTCTTCTTCTAGTACCCGACGAGCTAAGCGGAATCCACAGGCCCGATATTTAACACCTCAAAGCACAAACAACATGGACAGTCCTGAAGAAAACATCGTCGCCATATCAAACGAAACCACAGTCGCCGTTACCAGTGAGGAGACCGTTACCTCGATTCGTGTCCCCTCTGCTTCTCCAACTCCTGGACCTTCAACTGAAAGCAACCTGAAGCGTAAACTATCAAGAGTCAAGGTAGAGAAAACACCAAAATCAAATAAAAGTACGATGTGTGACTATTGCGGTGTTCACTACTCCCAAGATGTGGCACTTAGGAACGGAGCTGTATGGGTAGAGTGCATGAGCTGCGGCAAATGGTACCACCAAGAATGTACTGGCACAGAGTCGCCACAGTTCCTGTGTGATAATTGTGATAAAGTAGACTTTTCAGGTACTGATGACAGAGATTGGGCACCTGAATAG
- Protein Sequence
- MEDNRNKSGKSNKRKMKGEKRRNYDSSRFKESYMKVIKDNWSVYKASKEYGIPWSTLRRHIATHGGESFDLPKLGRPFTLDSDLEFFSLLSVPEVPQSSSSSTRRAKRNPQARYLTPQSTNNMDSPEENIVAISNETTVAVTSEETVTSIRVPSASPTPGPSTESNLKRKLSRVKVEKTPKSNKSTMCDYCGVHYSQDVALRNGAVWVECMSCGKWYHQECTGTESPQFLCDNCDKVDFSGTDDRDWAPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00840245; iTF_00840246;
- 90% Identity
- iTF_00840246;
- 80% Identity
- -