Ipod013139.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- -
- Assembly
- GCA_933534255.1
- Location
- OW152828.1:4694285-4696388[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-08 4.6e-05 23.3 0.0 5 40 57 92 53 96 0.84
Sequence Information
- Coding Sequence
- ATGAACATCTCTCTTTCATTTGGCCGCTGGTCGCTGTCCTCACCGGACGCGGTTTATTTGTTTCGCGCCAAAATATGCGAAAAAATGGAGGATAATCGGAACAAGTCCGGAAAGGAAAATAAAAGGAAAATGAAGGGCGAGAAACGCAGAAATTATGACTCTTCACGCTTCAAGGAGGCTTATATGAAAGTTATAAAGGATAATTGGTCAGTGTACAAGGCGTCGAAGGAATATGGCATACCGTGGTCTACTTTGAGAAGACACATAGCTACTCATGGAGGTGAAAGTTTCGACTTACCTAAACTTGGGAGACCATTCACATTAGACAGCGACCTTGAATTTTTCTCTTTACTTTCCGTTCCTGAGGTACCACAGTCTTCTTCTTCTAGTACCCGACGAGCTAAGCGGAATCCACAGGCCCGATATTTAACAACTCAAAGCATGAACAACATGGACAGTCCTGAAGAAAACATCGTCGCCATATCAAACGAAACCACAGTCGCCGTTACCAGTGAGGAGACCGTTACCTCGATTCGTGTCCCCTCTGCTTCTCCAACTCCTGGACCTTCAACTGAAAGCAACCTGAAGCGTAAACTACCAAGAGTCAAGGTAGAGAAAACACCAAAATCAAATAAAAGTACGATGTGTGACTATTGCGGTGTGCACTACTCCCAAGATCTGGCACTTAGGAACGGAGCTGTATGGGTAGAGTGCATGAGCTGCGGCAAATGGTACTACCAAGAATGTACTGGCACAGAGTCGCCACAGTTCCTGTGTGATAATTGTGATAAAGTAGACTTTTCAGGCACTGATGATAGTGATTGGGCACCTGAATAG
- Protein Sequence
- MNISLSFGRWSLSSPDAVYLFRAKICEKMEDNRNKSGKENKRKMKGEKRRNYDSSRFKEAYMKVIKDNWSVYKASKEYGIPWSTLRRHIATHGGESFDLPKLGRPFTLDSDLEFFSLLSVPEVPQSSSSSTRRAKRNPQARYLTTQSMNNMDSPEENIVAISNETTVAVTSEETVTSIRVPSASPTPGPSTESNLKRKLPRVKVEKTPKSNKSTMCDYCGVHYSQDLALRNGAVWVECMSCGKWYYQECTGTESPQFLCDNCDKVDFSGTDDSDWAPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00840248;
- 90% Identity
- iTF_00840248;
- 80% Identity
- -