Imas021776.1
Basic Information
- Insect
- Incurvaria masculella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_946894085.1
- Location
- CAMPPJ020000217.1:1147733-1165219[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-07 0.011 16.0 1.0 10 34 140 164 137 202 0.57 2 3 3.2e-80 1.1e-75 255.7 22.5 1 298 206 501 206 503 0.86 3 3 0.051 1.8e+03 -1.1 8.4 126 182 507 560 502 577 0.71
Sequence Information
- Coding Sequence
- ATGGGGCTGTTTAGCGAGCTGAGCGGGCGCGGCAGTCCCGCCAGCAGCGGGGAGGACGCTTACGAGGAGGCCTTCACCGACGGCGACTTCGACGACTCGGACGGCGAGCGCGATGCCGTAGCGGACGCGATGGCGGCGTCTCACGTCCCTCTCAACGAGACCCTCAACCGCGGCGTCCAGCTGGCCGAGCCGCGGACCAACGGCCTGGAGCACCCCGCACCCGTCGCCGCCCCCGACACCGGTGGCGGCGGCGGCGGCGGAGAGCGGCCCGAACTGCGCCGAGACTCTAGCATATCCAGCTGCGGCGATCAGAGCACCACCATTGTTGATTTTATCGGCAGAGAACATACGCACGTTCATGGCGACAAGGCCTACGACATATACGCTAAGGGTGATTGTTGGGCTGGCGGCACGGCACGGGCGCGGAGCAAAGCGTACGAGATACGCATGCGCGAGCTCGAGCGCCAGCAGCGCTTCGCAGTGGCTTGCGCCACGGCACGGGCGCGAGGGAGGCGTATGAAATACGGATGCGCGAGCTTGAACGGCAGCAGCGTGAGTTCGAGCAGCAGTAGCGCGAGCACGAGGACCATGCCGTGCCGACAAGGCCTACGAAATGCGGAGCAACGGCTGGCTGCGCGGCGCGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTCGAGCGGCAGCAGCGCGAGCACGAGGACCATGCCGACAAGGCCTACGACATGTACAGCGAGAGCGTCGGAGGGGGCGTGCGGCGAGCGGGAGTCACGGTCGCGGGGGTGGGGGCGGCCGCACGCGCGCCGCTACACTCGCCGCGTCGCTCCTCCGACACCTCCGACACCCTCGATGACACATTCAGTCTCAAGGACCTTCGGCACGAGCTCAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAACGACAAGGCGGCGCTCTCGTACCAGCTGGAGCTGCTCAAGGACCGGTTGGAGGACCTGCAGGAGCAACACGCTCAGCTACAGAGAGAGCACAAGGAGAAGTGCTCAGCGCACGAGCGCCTTCGGCGCGAGCACGCGTCCCTGCAGGACGAGTTGAGCGCGGCGCGCGGCGCGATCCGCGCCCGCGATGCCGCCATCGCCGCCGCCGGCTTCGCGCTGGTCGAGGCGTCGCTCGACGCGGCGCCGGAGCTTGCCGCCGCCGCCGCCGCCCCCACCTCCGAGCTGCCGCCGCTGGCGCTCGTGTCGCAGCAGGCGCACGACATGCTGCAGGAGGGCGAGGGAACGCTCGACGTGCGATTGCAGAATCTGTTCAGCTCGAAGCAGCAGCTGGAGTCGGAGGTGCGCAAGCTCAAACTTCAACTGAACGAGGAGCAGGACCGCGCAGGCCGACACAACGGCACCGCACACTACGACGAGTACGACGAGGAGATCGAAACGCTACGCAAAAACTGCTCAGAGTACAAGTCTCGAGCAGCGCGTGCGGAGACGGAAGCGGCCGTGCTGGGAGCAAGCGTGGTGCGGCTCGAGGCGCAGGTGGCACGACTTAAGGCGCGGCAAGACGACCGAGACACGGAGGAGGAGCAGCTGAAGCAGGACAAACGGAAGCTACAGCGGGAGGCGCGCGAGGCGCTGAACCGCGTGGAGGAGCTGGAGACGGAGAACGGGCACCTCACGAAGCGGCTCGACAAGCTCAAGAACGCCAAGTCCGCCCTGCTCAAGGAGCTCTGA
- Protein Sequence
- MGLFSELSGRGSPASSGEDAYEEAFTDGDFDDSDGERDAVADAMAASHVPLNETLNRGVQLAEPRTNGLEHPAPVAAPDTGGGGGGGERPELRRDSSISSCGDQSTTIVDFIGREHTHVHGDKAYDIYAKGDCWAGGTARARSKAYEIRMRELERQQRFAVACATARARGRRMKYGCASLNGSSVSSSSSSASTRTMPCRQGLRNAEQRLAARRAARAEAREIRMRELERQQREHEDHADKAYDMYSESVGGGVRRAGVTVAGVGAAARAPLHSPRRSSDTSDTLDDTFSLKDLRHELKEVEEKFRKAMILNAQLDNDKAALSYQLELLKDRLEDLQEQHAQLQREHKEKCSAHERLRREHASLQDELSAARGAIRARDAAIAAAGFALVEASLDAAPELAAAAAAPTSELPPLALVSQQAHDMLQEGEGTLDVRLQNLFSSKQQLESEVRKLKLQLNEEQDRAGRHNGTAHYDEYDEEIETLRKNCSEYKSRAARAETEAAVLGASVVRLEAQVARLKARQDDRDTEEEQLKQDKRKLQREAREALNRVEELETENGHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -