Basic Information

Insect: Ignelater luminosus
Gene Symbol: su(Hw)
Assembly: GCA_011009095.1
Location: Ilumi1.2:194790-199300[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.9e-05 0.0028 18.6 2.4 3 23 173 194 172 194 0.94

2 13 0.0013 0.13 13.4 1.0 2 23 226 248 225 248 0.94

3 13 0.0022 0.21 12.7 0.1 2 23 255 276 254 276 0.97

4 13 0.0001 0.01 16.9 2.4 1 20 282 301 282 303 0.95

5 13 5.6e-08 5.5e-06 27.1 1.1 1 23 314 336 314 336 0.98

6 13 7.3e-06 0.00071 20.5 0.3 1 23 346 368 346 368 0.98

7 13 4.1e-06 0.0004 21.3 0.3 1 23 374 396 374 396 0.98

8 13 1.9e-06 0.00019 22.3 0.5 1 23 402 424 402 424 0.99

9 13 2.5e-05 0.0024 18.8 1.9 1 23 430 452 430 452 0.94

10 13 1.9e-05 0.0019 19.2 2.1 1 23 458 481 458 481 0.96

11 13 2.4e-06 0.00023 22.0 0.4 2 23 488 509 487 509 0.96

12 13 1.7e-06 0.00016 22.5 3.8 1 23 515 537 515 537 0.98

13 13 6.8e-06 0.00066 20.6 3.1 2 23 544 566 543 566 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.9e-05	0.0028	18.6	2.4	3	23	173	194	172	194	0.94
2	13	0.0013	0.13	13.4	1.0	2	23	226	248	225	248	0.94
3	13	0.0022	0.21	12.7	0.1	2	23	255	276	254	276	0.97
4	13	0.0001	0.01	16.9	2.4	1	20	282	301	282	303	0.95
5	13	5.6e-08	5.5e-06	27.1	1.1	1	23	314	336	314	336	0.98
6	13	7.3e-06	0.00071	20.5	0.3	1	23	346	368	346	368	0.98
7	13	4.1e-06	0.0004	21.3	0.3	1	23	374	396	374	396	0.98
8	13	1.9e-06	0.00019	22.3	0.5	1	23	402	424	402	424	0.99
9	13	2.5e-05	0.0024	18.8	1.9	1	23	430	452	430	452	0.94
10	13	1.9e-05	0.0019	19.2	2.1	1	23	458	481	458	481	0.96
11	13	2.4e-06	0.00023	22.0	0.4	2	23	488	509	487	509	0.96
12	13	1.7e-06	0.00016	22.5	3.8	1	23	515	537	515	537	0.98
13	13	6.8e-06	0.00066	20.6	3.1	2	23	544	566	543	566	0.94

Sequence Information

Coding Sequence: ATGGAGGAAGAAGAGGCCATTGCGTGTCGTATAATAAACAAAATTGAGCCAGTTGATTTAGAGTCGGAAATGAACGATGTCAAAACAACATTACTGAAGAATATGTCTGTGATTGAATCTGACAACGAACACATTCTAATAAATCGTGTTGAGTTAATTGGAAATTCTGATGGAAATTTAGAAATTAATACCATTCAACAACTAGATGAAGCAATGGTAGAACAAATAGGAGAACATGAAGTTATTGAAAATGAAGAAATTGAGGAAGATATGGAAAGTGATGGTGTATTCATGGAAGAAGCCATCTTAGGTGGAACTAATTCTTTAATGGAAGATGACATAGTTGAAGAGGGTGCTCTTATTGAAGAGGAGGAAGATGATGGTATAGTAGGTGATGATGAAATGATTGAAGATGATAATATGTATGTGGAAGATGATGAAATTAACGATCCAGATTATGAAGAGAATCCCAACAGTGATCTGAAAACAGAGAATAGAGAAGAAGAAAGTAATCCATGCACTATTTGTCAACGTACATTTAAAACTTCTGCAAGTTTAAAACGACATGTAACAGTTTGTCATACTAAAGAGGAAGAACAAGATGACCCTCTTGCTTTCGAATTGTGTTTGTGCTGCGGAGAACCAGTTGATTCTGCTCACACTATGGGCGATTTAAAATGCGATAAGTGTGATAAGCTTTTTACAATGCAAAACAGCCTGGATAGACATAAAAGTATTGAACATTGTGAGGATGGTTTATGGCAATGTGCAGAATGTAGTCATGCTTACAGTGAAAGAGCACTATTGATAGAGCACATGCAGGTGCATCCCTTGAACAAATTGTATTCTTGCCGTCAGTGTAATCGAGAATTTACTCGCAAGTACCATTTGGATCGTCATATTACACAGACTGGTTGTGACGGAACCCCTCGAAACCAATTTCAGTGTCAAGTATGTCAGAAAGTTTTTTCTCGGAAAGACAATCTAAGAGATCATCTTCGGGCTCATGCTGGTCAAGTTAAAGTGAAGAAGATATTTAGTTGTGAATACTGTAGTAAAGAATTTCGTGGTTCTGCTCTACTTGCTGTTCACCTTAGAACACATACAGGTGAAAAACCATATCCTTGTGATTTGTGTCCAAAGCGCTTTCCTTCTAGTGGCGCTATGAAGAAGCATAGACGGATGCATACTGGAGAAAAACCATATCAATGCCCCAAGTGCGGTAATAGATTTGCTGCCAAAGAAACATTGAATAGGCATGTAAGAACCCACACAGGAGAAAAACCACATGCATGTCAATTTTGTGGAAAATCATTCATACAAGCTGCACAGTTACGTGCACATATATTTCATCACACTGGTGAGAATGCTTACACATGTCCTCATTGCAATCGTGCTTTTAATCGACGTGCACGACTTACGATGCATATTAAGTTTGTTCATGAAGGAGCAAAACCCATGGAATGTGATCAGTGTGACAAGACATTTTTCCGTAAAGAAGATCTTGCACGTCATATTATGTTGCATTCTGGACTTAAACCTTTTGAATGTGAAGTTTGTCACAAATGCTTTGCAGTCAAGTCTTCTCTCAAACTACATATGTTAACCCATAGAAAGGAACAACCATGCAGCTGTGACGAATGTGGTCGTGCATTTATCAGACAAGATTGTCTTTTACGCCATATGCGTGCTAAACATCGAGATGTTTTAGAAGACATTCTAGCAGGTGCTGAGAAAAAGAAACTTCAGCAACAATTATTAAATGCAGCTACAGATGCTGCTAAAAATGGAAGTAAAATCTTAACCGAAAGCACTATTTGGAATGAACTTACATTAACAGATTCAGTTAAAGAGTTACTCACTTTGTTGGTTGATGAAGCTACTTTAGAAGCATTTGGTTGGCCTGATGCACCTGTTGATAAATTATTAGACTCTGTTATTAAACGTTGTGGACATAAACCAGCATCCGAGGAAGATTTTGATTATATAGGTCGAATGAGAGAAAATGCTAAGTTGTTGTTTACTGTAGTTATTGATGATGAAGCTGTCAAATCTCTTCTTAATAATCAAACAGTTGATGAAGTTATATTGCATGTTTTACGATTAGCAAAAAGCGAATAA
Protein Sequence: MEEEEAIACRIINKIEPVDLESEMNDVKTTLLKNMSVIESDNEHILINRVELIGNSDGNLEINTIQQLDEAMVEQIGEHEVIENEEIEEDMESDGVFMEEAILGGTNSLMEDDIVEEGALIEEEEDDGIVGDDEMIEDDNMYVEDDEINDPDYEENPNSDLKTENREEESNPCTICQRTFKTSASLKRHVTVCHTKEEEQDDPLAFELCLCCGEPVDSAHTMGDLKCDKCDKLFTMQNSLDRHKSIEHCEDGLWQCAECSHAYSERALLIEHMQVHPLNKLYSCRQCNREFTRKYHLDRHITQTGCDGTPRNQFQCQVCQKVFSRKDNLRDHLRAHAGQVKVKKIFSCEYCSKEFRGSALLAVHLRTHTGEKPYPCDLCPKRFPSSGAMKKHRRMHTGEKPYQCPKCGNRFAAKETLNRHVRTHTGEKPHACQFCGKSFIQAAQLRAHIFHHTGENAYTCPHCNRAFNRRARLTMHIKFVHEGAKPMECDQCDKTFFRKEDLARHIMLHSGLKPFECEVCHKCFAVKSSLKLHMLTHRKEQPCSCDECGRAFIRQDCLLRHMRAKHRDVLEDILAGAEKKKLQQQLLNAATDAAKNGSKILTESTIWNELTLTDSVKELLTLLVDEATLEAFGWPDAPVDKLLDSVIKRCGHKPASEEDFDYIGRMRENAKLLFTVVIDDEAVKSLLNNQTVDEVILHVLRLAKSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00399740;
90% Identity: -
80% Identity: -