Basic Information

Insect: Ignelater luminosus
Gene Symbol: MBD-R2
Assembly: GCA_011009095.1
Location: Ilumi1.2:63537-67909[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-20 1.6e-16 60.2 0.1 8 75 433 501 427 503 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-20	1.6e-16	60.2	0.1	8	75	433	501	427	503	0.92

Sequence Information

Coding Sequence: ATGGGTCGAAAGTGTATGGTACCTGATTGTTTATCTGAAGAAGGTAGGAATGAAGATAGAGGGGTAACATTTCATAAAATTCCACTACATGCGGATATTCGACCAAAATGGATGTCCTTATGTCATATCCCTGAAGATAAATTTAACGTCAAAGTTGTTCACGTTTGTTCAAGGCATTTTTTAAAAGCAGACTTTTATCGGTTTAAAGGAAAAAAGTATATGTTAAAGCAGGGTGTGCTTCCTAGTGTTTTTCCTTGGAACAAATTAAAGAGAGAGAATGAGATTTCTCAGATGGACGACTCTTTTTCTTCAAAACCAGGAACTGTTGAAATACTATCTACAGGAATTAAAGAAGAAATAATGAATGACGTGCAAATTGACGAAGAACAAATTCCTCCAGAAGTTCACAAAATGGAAGTCGATACTAAAACAGAGATAAAAGATGAAATTTTGAGTGCAGCAGAAGAAGTAATAACTACTAATACTATTAAAAAGGAAAGTTCAGAAACCATAGGTGATATTTTAATGTGTGATCCTGCAGAATCGCTAACTGTTGCTAAAAAAATTGAACCCCTTCCAAGCTCATCCACAACTATTGAGCAACAAGGAAAATCTATTCAAACAGCATTTGGTACTGTTAATTTAAAAATAAATAGTCGATTAGAAGCATTAGACTTTAATCAGATTTGGTTACCTGCACGAATGATTGAGATTGATTATGAAGAAAATGAGGTACTTATTCATTTTGAAAAGTATTCTAGTAAGTATGATGAATGGATAAACATGAATAGTTCTCGTTTACGTCCTGTACAACCTCCTACTAAAAAAGTAGTTTCTGAAACTTTTGTTATTGGCGAAAAGTGTATGGCATCATGGAGTGATGCTAGAAAATTTCCTGCTGTAGTTACCAAAGTAATTGATAAAGATACATATGAAGTATTATTTAATGATGGTTTCGTTAAAGTATTAAAAGCACATAGGATGGCTAAAGCTGATGGTAAATCAGTTGGTTCTGCTCCATTATTTAACCCCGCAGAAGGTACAAAACAAGATCGTCGTGAAAAGAAACGAAAATTAAATGTTGTAGAATTGTTTCGTAAACGTGCTAAAGTTGATAATTCAGATGAAGCTTCTGGAACTGCAATTGGTTCTTCAGTGACTACATCTGATGAAGGTATTGCCAGTCCAAATGAAGACTCAGATTCATTTTTGCCTAGATGGGAAAATGGACGACCCGTTGGTGTCGAGTCTGTTATAGAAACTAGTGATGGAATAAGAAAATCTGTTATAGTACCAGATCCTAAGTTGCCATTAGGTTGGCAAAAACATTTGACGCAAAGGAGTCATGGTGCATCAGCTGGGAAGTGGGATACTGTACTTGTAAGCCCTGAAGGCCGCAGATTTCGTACACGTTCAGAAATAAAAGCGTACCTAGAAGAAAATCCTCACTTGAGTTACTCCGAGAATATGTTTAACTTTAGTCTTCATAAACGAACAAGACGTCGACCTGTATCAACCACTACTGATACACCTTCTGAATCTGCTCCACCTGATCATCCACCACCACCTGCACCTCCACAGGAGGAAGAGAATTTGAATAGTTTGAAAATTCCTCTAATCAATGACGTCTATAAATGTCCTATTGAAGGTTGTGGAAAAAATTTCAGACGTGAAAATTTAGCACAAATGCATGTTAAACATTATCATCCAAAATTCACAAAATATTTAGATTCGACACCCAATGTTGCTGATTTAGCATATGCACGCACTGTTGGTGAATCTCTAGATAAATCCCCAGAAAGAATTGCTAGATCTGCACCTACTAGACAAACACAAAAGAGTATTACACCAAAAACATCTACACCTAAAATAAATGTTTATTCTCCATCTGTAGAAACAGAAACAAAACTTGCCTCACAAACAATTGATTCTCAAGCAACTCAGTTGCAAAAAACGAAGGACTCGGAGATTTTAAAATTGCTCAATAGCAAACCTCCTGAAGATAATGCACCTAAATATCCACCTGGTTTACCATCAAGTATGTATCCTGATATAAAATTAAAAGATCTTTTGAACAAATCTGAAGGCATCCCAAAACGTGACGATTTGAATTTAAAAACGCTTAGTGCAAGTACTACTAGACCAACAGGTATTAAAACATTACTACCTGTCGTGCGACCAAATGATAAAAAGGAAATTGATACTGAAAAGAATCAAACAGTTGATACTGAAACATGGCCTAAGACACCTGCAAATAAAATACATTCTATCAAACAAAATCTTAAACGCAAACGTCAGGTTTCTGAAAATGTTGAACAGTTAAAATCTAAAGAAAATATTGAATCGACCACGTCTGGTTCGATAATAAAACAGGAACCCGGTCCAACATCAGAGTCCTCTTCTAATTATATAGTAGAAGGTGGTGAAGTTATTAAAATTGTGCGAATGAAACGTGAAGAAATTATAAATTGTACCTGTGGAATAACTGAAGAAGATGGACTTATGATACAGTGTGAATTATGTTTATGTTGGCAACATGCATATTGCAATAACATTGAAAGAGAGAATCAAGTTCCTGAAAAGTACATTTGCTATATTTGTCTGAACCCAATGAGGCAACGATCATCCAGGAAATATTTCCATGATCAAGATTGGTTAAAAAATGGAACATTACCTGTTGCAAATTATCATTGTAAAGATAATGAATCTTTGAAAAAAAGATTCGAGAAATTGAAAAAATCTCATGACATGACTGGTGGACTTCTTGAGTTGAGGGATTTTATGCACTCACTGAAAGTCAAACTTAAGATTGCCGAGGCGAAGAATCATCCAAAGTTGTATCTTTGGTCAAAACAATGGGAAAAACTTCCACTACCTGAAAAAATTGAAATAAAAACAGATGTAGAAGACTCCAAACTAAAATCCTCATCAATCACTGAGAACAGTTTCACTAAAAGTGAATTAGATCTGTTAAGTAATAAAACAGAATCACAAAATGATTCAATGTTATTAAGTATTCTAAAATCAGCCAAAGATGAACAAAAATTGAAAGATGATTTGGATTTAAACACACTAATCGATAATAATTTGGAGCAACTTCCAATGAGTATTCCTATTATACCACAACCAGAAGCAGCTATTGAATCGGCCGATTGTAAATTAAATTTGTTGGACCATATTGCACATTGTCAGAGTTTGGTCGAAGAGAGACTTAATGACTTCGAACGACAATTGGATGAATTGGATGGAAATTCAAATAACACAGAAGAAGATTTTAGTCGTACATGCCAAACAATGCAGATGTTATTGCGAGACTTGAATACACTCAAGGAATTAAGTCATAGTAATAGTTTATAG
Protein Sequence: MGRKCMVPDCLSEEGRNEDRGVTFHKIPLHADIRPKWMSLCHIPEDKFNVKVVHVCSRHFLKADFYRFKGKKYMLKQGVLPSVFPWNKLKRENEISQMDDSFSSKPGTVEILSTGIKEEIMNDVQIDEEQIPPEVHKMEVDTKTEIKDEILSAAEEVITTNTIKKESSETIGDILMCDPAESLTVAKKIEPLPSSSTTIEQQGKSIQTAFGTVNLKINSRLEALDFNQIWLPARMIEIDYEENEVLIHFEKYSSKYDEWINMNSSRLRPVQPPTKKVVSETFVIGEKCMASWSDARKFPAVVTKVIDKDTYEVLFNDGFVKVLKAHRMAKADGKSVGSAPLFNPAEGTKQDRREKKRKLNVVELFRKRAKVDNSDEASGTAIGSSVTTSDEGIASPNEDSDSFLPRWENGRPVGVESVIETSDGIRKSVIVPDPKLPLGWQKHLTQRSHGASAGKWDTVLVSPEGRRFRTRSEIKAYLEENPHLSYSENMFNFSLHKRTRRRPVSTTTDTPSESAPPDHPPPPAPPQEEENLNSLKIPLINDVYKCPIEGCGKNFRRENLAQMHVKHYHPKFTKYLDSTPNVADLAYARTVGESLDKSPERIARSAPTRQTQKSITPKTSTPKINVYSPSVETETKLASQTIDSQATQLQKTKDSEILKLLNSKPPEDNAPKYPPGLPSSMYPDIKLKDLLNKSEGIPKRDDLNLKTLSASTTRPTGIKTLLPVVRPNDKKEIDTEKNQTVDTETWPKTPANKIHSIKQNLKRKRQVSENVEQLKSKENIESTTSGSIIKQEPGPTSESSSNYIVEGGEVIKIVRMKREEIINCTCGITEEDGLMIQCELCLCWQHAYCNNIERENQVPEKYICYICLNPMRQRSSRKYFHDQDWLKNGTLPVANYHCKDNESLKKRFEKLKKSHDMTGGLLELRDFMHSLKVKLKIAEAKNHPKLYLWSKQWEKLPLPEKIEIKTDVEDSKLKSSSITENSFTKSELDLLSNKTESQNDSMLLSILKSAKDEQKLKDDLDLNTLIDNNLEQLPMSIPIIPQPEAAIESADCKLNLLDHIAHCQSLVEERLNDFERQLDELDGNSNNTEEDFSRTCQTMQMLLRDLNTLKELSHSNSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00838635;
90% Identity: iTF_00838635;
80% Identity: iTF_00838635;