Ilum009672.1
Basic Information
- Insect
- Ignelater luminosus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_011009095.1
- Location
- Ilumi1.2:83396-83764[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.089 2.4e+03 -1.9 1.0 240 282 24 68 13 104 0.55 2 4 3.5e-106 9.6e-102 340.9 34.9 1 300 124 416 124 416 0.93 3 4 0.0072 2e+02 1.7 4.3 120 170 414 464 413 473 0.85 4 4 0.14 3.9e+03 -2.6 5.9 131 231 442 483 436 491 0.40
Sequence Information
- Coding Sequence
- ATGAGTGACACAGAATCTAGTAATTCAATATCGCCCAGTGGAAGTCTCGATTCTTTAACTGATATTTTAAATAATTTAAATTCTGATGATGAAGAACTAGAGCATGATGTTAATGTGAGGGAAAAGTCAAATGATGTAGATGATAAAAGTCAACAAACACCACCTTATCATGAAACAACAGATTGTCAAGGAGAAAATAACCAAATTAAATCTAAAAATGATGAAAACGTAGTGCAAGCTACAGTTAATAATAATATTGAAAATATCGATATTTCTGATGCTCAACATGCAAAATTAAGCAAAAATCACAGTGTAGAATATTCAGAAGATGGTGTTATTCAACAATTTCTTAATCATTGTAACGATGATGCAGAAGCACGTCTCTTGGCACGTCGACAAGCTAGGGCAGAAGCTAGAGACATCCGCATGCGGGAGCTAGAACGGCAGCAACGAGAGCAAGAGGAGAATGCTGATCGGCAATACGACATGCTGGAGGCATCGACCCGTGCAGCAAGATCTGCAGGGAATAGATATCTTTCCAGCCGCCGTAGTTCAGAAGACTCCCTTGAAGATGGTGGAAGTATTAGGGAAATACGACATGAACTTAAAGAAATGGAAGAAAAGTTTCGTAAGGCTATGATAGCTAATGCTCAACTAGACAATGATAAAGCAGGTCAGACATATCAATTGGAACTTCTTAAAGATAGGTTAGAAGAATTAGAAGAAGAACATTCGCAGCTCCGACGTGAGCATAGGGATAAATGTAGGGAGCACGATCAGCTGAAACGACTAGCTGCTAGACTCAAAGATGATTTGGCTGTGACTCGAGCAGAATTAGAAGAACGTGATCGTTTAATCGCTGAAAAAGGTTTAGTAATAGTAGTCGAAGACCTTATTCCATACGAAGAAGAAAATGGAGATGTCAGTAATAACAGCATTATTAGTACGCCTAAGAAAGCTCTTGTTAGTTCGGAAAATGCCCAGATATTGGAAAAAGCTGGTGAAGGGAGCTTAGATGTACGATTAGCAAGGTTTGCATCAGAGAAAAAAGATCTTCAAGATCAAATCAGTCACCTAAGATTAGAATTAGAAGAAGAAAAAAATAGAAAGAGAAAAATTAGTGGTGTTACTCTTAATGGGCCTACATCAGACTCTGATTTTGATGCTGATGATGTACAAAAAGATGTAGTAAGGCAGTTAGCAGATTACAAATTTAGAGCTCAAAAGGCTGAACAAGATGTGGCAACGTTACAGGCAACAGTTGCCAGGCTAGAAAGTCAAGTAATTAGGTATAAATCAGCAGCAGAAATGTATGAAAAGTCTGAAGAGGCATTGAAGCAAGAAAAACGAAAACTTCAAAGAGAGGCAAGGGAAGCACAAAATCGAGCAGAAGAATTAGAGACATCAAATACTCATCTTCTGAAAAGGTTAGATAAACTTAAAAATGCCAAATCAACTTTACTAAAAGAACTTTGA
- Protein Sequence
- MSDTESSNSISPSGSLDSLTDILNNLNSDDEELEHDVNVREKSNDVDDKSQQTPPYHETTDCQGENNQIKSKNDENVVQATVNNNIENIDISDAQHAKLSKNHSVEYSEDGVIQQFLNHCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEASTRAARSAGNRYLSSRRSSEDSLEDGGSIREIRHELKEMEEKFRKAMIANAQLDNDKAGQTYQLELLKDRLEELEEEHSQLRREHRDKCREHDQLKRLAARLKDDLAVTRAELEERDRLIAEKGLVIVVEDLIPYEEENGDVSNNSIISTPKKALVSSENAQILEKAGEGSLDVRLARFASEKKDLQDQISHLRLELEEEKNRKRKISGVTLNGPTSDSDFDADDVQKDVVRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEMYEKSEEALKQEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -