Basic Information

Insect: Idaea straminata
Gene Symbol: -
Assembly: GCA_951213275.1
Location: OX577853.1:12196965-12205211[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.044 3.6 8.9 0.4 2 23 134 156 133 156 0.90

2 17 0.093 7.6 7.8 0.4 2 23 385 407 384 407 0.95

3 17 0.26 21 6.5 0.1 1 20 415 434 415 436 0.94

4 17 1.1 90 4.5 0.9 3 23 447 467 446 467 0.95

5 17 1.9 1.5e+02 3.8 0.2 1 23 483 506 483 506 0.82

6 17 0.01 0.83 10.9 2.4 1 23 515 538 515 538 0.92

7 17 8 6.6e+02 1.7 3.8 7 23 587 604 579 604 0.87

8 17 4.5 3.6e+02 2.6 0.9 2 23 641 662 640 663 0.93

9 17 0.0019 0.16 13.1 3.7 1 23 669 691 669 691 0.96

10 17 1.8e-05 0.0015 19.5 1.4 1 23 698 720 698 720 0.98

11 17 0.00011 0.0091 17.0 1.3 1 23 725 747 725 747 0.96

12 17 0.0028 0.23 12.6 0.5 1 23 753 775 753 775 0.97

13 17 2.4e-06 0.0002 22.3 2.4 1 23 781 803 781 803 0.98

14 17 2.5e-05 0.0021 19.1 0.6 2 23 810 831 810 831 0.98

15 17 0.22 18 6.7 2.1 2 23 841 863 841 863 0.96

16 17 0.0014 0.11 13.6 0.1 1 23 868 890 868 890 0.97

17 17 0.0083 0.68 11.1 3.5 1 23 896 919 896 919 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.044	3.6	8.9	0.4	2	23	134	156	133	156	0.90
2	17	0.093	7.6	7.8	0.4	2	23	385	407	384	407	0.95
3	17	0.26	21	6.5	0.1	1	20	415	434	415	436	0.94
4	17	1.1	90	4.5	0.9	3	23	447	467	446	467	0.95
5	17	1.9	1.5e+02	3.8	0.2	1	23	483	506	483	506	0.82
6	17	0.01	0.83	10.9	2.4	1	23	515	538	515	538	0.92
7	17	8	6.6e+02	1.7	3.8	7	23	587	604	579	604	0.87
8	17	4.5	3.6e+02	2.6	0.9	2	23	641	662	640	663	0.93
9	17	0.0019	0.16	13.1	3.7	1	23	669	691	669	691	0.96
10	17	1.8e-05	0.0015	19.5	1.4	1	23	698	720	698	720	0.98
11	17	0.00011	0.0091	17.0	1.3	1	23	725	747	725	747	0.96
12	17	0.0028	0.23	12.6	0.5	1	23	753	775	753	775	0.97
13	17	2.4e-06	0.0002	22.3	2.4	1	23	781	803	781	803	0.98
14	17	2.5e-05	0.0021	19.1	0.6	2	23	810	831	810	831	0.98
15	17	0.22	18	6.7	2.1	2	23	841	863	841	863	0.96
16	17	0.0014	0.11	13.6	0.1	1	23	868	890	868	890	0.97
17	17	0.0083	0.68	11.1	3.5	1	23	896	919	896	919	0.97

Sequence Information

Coding Sequence: ATGACTTCAGACGACTCCGACGAAGAGCCGTTATCTACTCTTGCGGCATTTAAACGGAAACAGGAATCTGAGGTGGAAATAATTCCTGTGTACACGAATAcgaaaaaaacttcaaaaaagaagaaatcGAGTAAGAAACTGTGCGGTGTGACAATAGAATTAGCTAGAGCTGAGTCTCCGCCAGTTCTAGAACGGCCTATGGATGTTTGGATGTATCTAAAAGACTTAAATGCAACAGGACCTTACAGCTGCCTCCTTTGTGAAGAGTGGTTTATAAACAAAACGAAAATAGTCATACATTACATTGTTGATCATCGGAAGAATTTCTGcggtatatgtagatattttgttacTGATGATGAGGCATGGGTCACACATCAAAGTTTCCACAAGCCCTGGACATGTTCTCAGTGTCCCAACTCATTCGAGGAACTCAGAGAGCTGCGGAGACATTTCAGTGAGGACCACAAGTTGGTTCACTGCAGACTCTGCCACACGCGAATGCTTGAAGACGAATATAACACTCATCTctttaaaaaacacaacatgTCAGATGTGTCATATAAAAACCATGACATCTACTGGTTTTTTGCGAACGAAGCCCGTGACAAATTCAAATGCTTCCTTTGCTCAAAACCAAATAACTCTACCAAACAATTTGTTAATCATTATATATCATTCCATCATATCACTTTAAAATGTCTAGCGCCACTGCTAAGTGGTAAGAATCAcgactttaaaataaaaggtGCTGATTTGACACCTACTTTTATTGAAAATCAACTAAAGAATTTCAGTAAATTTGGTTATGTTGATTTGGAAGCACAACATGGCGAACCAGTCGAAACAGTTGAGACTTTTGAAACCAATATTAAAGAGGAAGCATCGAGTGAACCGGAGGATTATGACACTCAATCAAATACACTAAAAAATGTTGTTCCTTTGTCCACTGAAAATCCAGATCATGTACTGAATATACCTGATAGCTATTCAGGCGAAGAGAGTTTTGATGTAACATTAATGGAAGTAATCATAATACACCAGTGTTATTACGACTATCTAAAAGACACGATGAAATCAATTGAATCAAACTCAATGCCAAATTCTACAATAAACTACGAAGATGCAATATCTGACAAATTAATAGACGTCGAATGCAGTCTATGTGCTGAAAAATACACTACGTTAAACACATTTGTGTCGCATATGACTAAAATGCATTGCATTAAAATGCTGCCTACATTTTCGTGCAGAATCTGTGCAACACCATTTGATTCTCTTAACGATCTGTCGTATCACATAAGTCAAGAGCTAGGTGATTTCGAGGACTTATGGTTATGTCAATTTTGTGAGGAGGAATTTGATAATCGAGAAAAGACGAGAACACATTTGACTGAACATTGGAATACCTTAGTGGAAAGTAATTGTTTTAGTCCTCATTTAGGGTTCAAATGCAAGTACTGTCCTGTGTTATTTTGGAATGAGCCAGATAGAGAAGCACATCAAATTAAAGAACACTTCAATAATTACAAGGAAGACTTTTATAAATGTGGGAGATGTGATAAACTCTTTAGCGATAAGGTATGGTTCATCCACCACTTCATCCAACGTCACCAAGCTCACAACACTTCACCTCTCTACTTAGTCAAGTGCTGTATTTGCTGCCTGAGCTTACCCACTATAGAAGACATGAGGATCCACTTTGAGATGAACCATCCGGAGGCTACGAAAGTGTTCTGTTCTCTCGGGACATGTAGGCATAAGCCGTTCAGTCATAGGAAGTCTTTTCAGTTGCATTTGAAAGCTTTCCACACTCGTCCACGCAAGCGTGGTGACGGGCGGTCAATGTGCGCGGTATGCGGGCTGCAGTTCCAGACAACGCGCGCGTGTGCGGCGCACGCTGCGCAGGCGCATCGCCTCTCCTGCGCCCTCTGTCGGCTCAAACTATCCACACTTGATGAACGTAAAATCCACTATCTGATCCACCATCCGGGCCGGCACCCGTTCCAATGCGACGTTTGCGAGAAGTCGTTTCAGTACAAATCTTCGCTCTATCTACACAAACATGAACACTCGCCCAATAAGCAGGACTACACATGTACTTACTGTGAGAAAGTCTTTAAGAAGCGTGACTCGTACCGCGAGCACCTGGCTATCCACGCGGGCGCTCGCCACGCCTGCTCCTACTGCCCTGCGATGTTCGTACAACGCTCCAACATGCTACGTCACGAGCGGCGTCACACCGGCGAGCGGCCCTACACCTGCATACACTGCCCGCGGACCTTCGCCGATAAAGGAGCGGCTACCTCGCACGCCAGAACTCATCAAAAAGAGCCATCGTTTTCGTGTATGTACTGCGGACAGACTTTCGTTCAGAAGTCGAAACTTACGTACCACATTCGTAGACACACTGGCGAAAATTTGGAAACTTGTACGATTTGTTCTAAAATATTCACGAGCAGTTTCGCATTAAGGGAGCACATTAAAATACACGATAGCAAAGATGGAGCTAATGCTGCAAAATGCCCTATTTGTGAGAAATGGTACCAGAATGAGAAATGCATGATGAAGCATATGCGCGGCACGCACACTGGCACTCGACACCCGTGCCCCATCTGCCGCAAGGACCTCAACAGTGCAGCCTCCTTGCGGGAACATGTCCTCACACACACTGATACTAAGACATTTAAGTGCAAAATATGCCCAAAGAACTACAACGTAAAACGCACAATGCTCCACCATCTTGAAAAGCGACACAAATTAAACGCAAATGACGAGACCGTCCACGAGTTCTACATCAAACTAGATCCTAGAGAATGCAACCTTAAACTAGATCTAGAAACAATAGACAGTATCTTCGGGCCACCGAAGAAGAAAAACACAGATGTCCTGATTGGTGATTTTGTTACATTAAACAAACCTATCGAAGCGAATCAGCCAATAGAAACAAAGTTATTAAAAGTGAATCACCCAATAGAAATGAAGGATGAAGATGATAAAAATTCAGAAGAGAGTGATAATAGTGAAACGGAGATTGATGTTATCATCAAAAAGGAACCGACGGACATTGATGATAATGAACAGAATCTGGAACCAACTGATTTTGTTAGTGTTAAGATTGAAAGTATGGACTATGAAACAACATAA
Protein Sequence: MTSDDSDEEPLSTLAAFKRKQESEVEIIPVYTNTKKTSKKKKSSKKLCGVTIELARAESPPVLERPMDVWMYLKDLNATGPYSCLLCEEWFINKTKIVIHYIVDHRKNFCGICRYFVTDDEAWVTHQSFHKPWTCSQCPNSFEELRELRRHFSEDHKLVHCRLCHTRMLEDEYNTHLFKKHNMSDVSYKNHDIYWFFANEARDKFKCFLCSKPNNSTKQFVNHYISFHHITLKCLAPLLSGKNHDFKIKGADLTPTFIENQLKNFSKFGYVDLEAQHGEPVETVETFETNIKEEASSEPEDYDTQSNTLKNVVPLSTENPDHVLNIPDSYSGEESFDVTLMEVIIIHQCYYDYLKDTMKSIESNSMPNSTINYEDAISDKLIDVECSLCAEKYTTLNTFVSHMTKMHCIKMLPTFSCRICATPFDSLNDLSYHISQELGDFEDLWLCQFCEEEFDNREKTRTHLTEHWNTLVESNCFSPHLGFKCKYCPVLFWNEPDREAHQIKEHFNNYKEDFYKCGRCDKLFSDKVWFIHHFIQRHQAHNTSPLYLVKCCICCLSLPTIEDMRIHFEMNHPEATKVFCSLGTCRHKPFSHRKSFQLHLKAFHTRPRKRGDGRSMCAVCGLQFQTTRACAAHAAQAHRLSCALCRLKLSTLDERKIHYLIHHPGRHPFQCDVCEKSFQYKSSLYLHKHEHSPNKQDYTCTYCEKVFKKRDSYREHLAIHAGARHACSYCPAMFVQRSNMLRHERRHTGERPYTCIHCPRTFADKGAATSHARTHQKEPSFSCMYCGQTFVQKSKLTYHIRRHTGENLETCTICSKIFTSSFALREHIKIHDSKDGANAAKCPICEKWYQNEKCMMKHMRGTHTGTRHPCPICRKDLNSAASLREHVLTHTDTKTFKCKICPKNYNVKRTMLHHLEKRHKLNANDETVHEFYIKLDPRECNLKLDLETIDSIFGPPKKKNTDVLIGDFVTLNKPIEANQPIETKLLKVNHPIEMKDEDDKNSEESDNSETEIDVIIKKEPTDIDDNEQNLEPTDFVSVKIESMDYETT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00835948;
90% Identity: iTF_00834998;
80% Identity: -