Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292395.1:2763829-2776382[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.043 3.2 9.1 0.1 2 23 134 156 133 156 0.88

2 17 0.77 57 5.2 0.7 2 23 387 409 386 409 0.95

3 17 0.21 16 6.9 0.1 1 21 417 437 417 438 0.95

4 17 0.056 4.1 8.8 1.5 2 23 448 469 447 469 0.95

5 17 2.2 1.6e+02 3.7 0.2 1 23 485 508 485 508 0.82

6 17 0.02 1.4 10.2 1.2 1 23 517 540 517 540 0.91

7 17 9.4 7e+02 1.7 3.8 7 23 589 606 581 606 0.87

8 17 0.78 57 5.1 0.6 2 23 643 664 642 665 0.93

9 17 0.0023 0.17 13.1 3.7 1 23 671 693 671 693 0.96

10 17 2.1e-05 0.0015 19.6 0.9 1 23 700 722 700 722 0.98

11 17 0.00013 0.0097 17.0 1.3 1 23 727 749 727 749 0.96

12 17 3.2e-05 0.0024 19.0 0.1 1 23 755 777 755 777 0.99

13 17 2.9e-06 0.00021 22.3 2.3 1 23 783 805 783 805 0.98

14 17 3e-05 0.0022 19.1 0.6 2 23 812 833 812 833 0.98

15 17 0.26 19 6.7 2.1 2 23 843 865 843 865 0.96

16 17 0.00062 0.045 14.9 0.3 1 23 870 892 870 892 0.98

17 17 0.04 3 9.2 3.3 1 23 898 921 898 921 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.043	3.2	9.1	0.1	2	23	134	156	133	156	0.88
2	17	0.77	57	5.2	0.7	2	23	387	409	386	409	0.95
3	17	0.21	16	6.9	0.1	1	21	417	437	417	438	0.95
4	17	0.056	4.1	8.8	1.5	2	23	448	469	447	469	0.95
5	17	2.2	1.6e+02	3.7	0.2	1	23	485	508	485	508	0.82
6	17	0.02	1.4	10.2	1.2	1	23	517	540	517	540	0.91
7	17	9.4	7e+02	1.7	3.8	7	23	589	606	581	606	0.87
8	17	0.78	57	5.1	0.6	2	23	643	664	642	665	0.93
9	17	0.0023	0.17	13.1	3.7	1	23	671	693	671	693	0.96
10	17	2.1e-05	0.0015	19.6	0.9	1	23	700	722	700	722	0.98
11	17	0.00013	0.0097	17.0	1.3	1	23	727	749	727	749	0.96
12	17	3.2e-05	0.0024	19.0	0.1	1	23	755	777	755	777	0.99
13	17	2.9e-06	0.00021	22.3	2.3	1	23	783	805	783	805	0.98
14	17	3e-05	0.0022	19.1	0.6	2	23	812	833	812	833	0.98
15	17	0.26	19	6.7	2.1	2	23	843	865	843	865	0.96
16	17	0.00062	0.045	14.9	0.3	1	23	870	892	870	892	0.98
17	17	0.04	3	9.2	3.3	1	23	898	921	898	921	0.94

Sequence Information

Coding Sequence: ATGAATTCCGACGACTCCGACGAAGAGCCGCTATCTAATTTAGCGGCATTTAAACGGAAACAGGAATCTGAAATAGAAATAATTCCTGTGTACACCGATACTAAAAAACCTTCGAAAAAGAAGAAATCTACTAAGAAACTATGCGGTGTGACGATAGAAGTAGCTAGGGCAGAGTCTCCGCCGGTTCTTGAACGGcctatggatgtttggatgtatCTAAAAGATTTAAATCCAACAGGACCTTACAGCTGTCTACTTTGTGAAGAATGGTTTataaacagaacaaaaatagtTATTCATTACATTGTGGATCATCGGAAGAACTTTTGtggtatatgtagATATTTTGTACCTGATGAAGAGGCATGGGTTACACATCAGACTTTCCACAAGCCTTGGCCATGTTCACAATGTCCTCAGTCATTTGAAGAGCTTACTGACCTCCGGAGTCACTTCAGCGGAGACCACAAGTTGGTACACTGTCGACTCTGCCACACACGTGTGCTCGAAGAAGAGTATAACAACCATCTCTTCAAGAAACATAACATGACCGATGTCTCGTACAAGAATGAGGACATCTTCTGGTTTTTCGAAAATGATGCCCTtgataaatttaaatgtttccTGTGTTCGAAACCAAATAATGCTGTAAAACAATTTGTTAATCATTACATTTCATTCCACCATTTCACTTTAAAATGTTTAGCACCGCAGCTTTGTGGTAAAAATTACGAGTTTAAAATAAAAGGTGCTGATTTAACTCCCGGGTTTATTGCTAGTCAATTAAAGAACTTTAGTAGATTTGGTTATGTGGACTTGGAACCAAGAACTAATGAACCCATCGAAATGGTTCAGACCTTTGATGTTCGTATTAAAGAGGAAGTACAGAGTGAAACTGAGGATAATGATGCTcaaggtaaaaaaaatacactaaaaaatGTTGTTCCATTGACGAGTGAGAACCCTGATCATGTACTAAATATACCAGACAGCTATCCGGGGGAAGAGAATTTCGATGTTACATTGATGGAACTAATTCTAATAAACCAGTGTTATTATGATTACCTTAGAGAAACAGTTAAATCAATTGAATCAAACACAATGCCTAATTCTGTTATCAATTACGAAACTGCAATAGCCGATAAATTGATTGATGTCGAATGCAGTCTATGTTCTGATAAATACACTACACTTAACACATTTGTCTCCCATATGAGTAAAATGCACTGTGTTAAAATGCTGCCTACATTTTCATGTAGAATCTGTGCAGCTCCATTCGATAATCTTAATGAACTGTCTTATCATATGAACCAAGAGCTAGGTGATTTCGAAGACTTATGGATATGTCAATTCTGTGACAAAGAATTTGATGATCGGGAAAAGACTAGAATACACTTGTGTGAACATTGGGATACTTTAGAGGAAAGCAACTGCTTTAGCCCCCATTTAGGGTTCAAATGCAAGTATTGCCCTGTGTTATTTTGGAATGAGCCGGACAGAGAAGCACATCAAATTAAAGAACACTTTAGTAATTACAAAGAAGACTTTTATAAATGTGGGAGATGCGATAAATTGTTCAGTGATAAGGTATGGTTTATCTACCACTTCATCCAGCGTCACCAAGCTGCTAACGCCTCTCCCCTTTATCTAGTCAAATGTTGCATCTGTTGCCTGAGCCTACCCACAGTTGAAGACATGAGGATCCACTTTGACATGAACCATCCTGAGGCTACGAAAGTGTTCTGTTCCCTCGGGACGTGTAGGCATAAACCTTTCAGTCATCGGAAGTCTTTTCAGTTGCATTTGAAAGCATTCCACACTCGTCCAAAGAAGCGCGGCGACGGGCGGTCTATGTGCGCGGTGTGCGGGCTGCAGTTCCTGACGGCGCGCGCGTGTGCGGCGCACGCGGCGCAGGCGCACCGCCTCTCCTGCGCCATCTGTCAACTCAAGTTGTCCACACTCGATGAAAGGAAGATCCACTACCTGATCCACCACCCGGGCCGCCACCCGTTCCAATGCGACGTCTGCGAGAAGTCCTTCCAGTACAAGTCGTCGCTCTATCTGCACAAACACGAGCACTCGCCCAACAAACAGGACTACGTCTGTACTTACTGCGAGAAGGTTTTCAAGAAGCGCGACTCGTACCGCGAGCACCTAGCCATCCACGCGGGCGCGCGGCACGCCTGCTCCTACTGCCCCGCGATGTTCGTGCAGCGCTCCAACATGCTGCGTCACGAGCGGCGCCACACCGGCGAGCGCCCCTACACCTGCCCGCAGTGCCCGCGCACTTTCGCGGACAAAGGCGCCGCTACCTCGCACGCCAGGACGCATCAAAAAGAGCCCTCGTTTTCGTGTATGTACTGCGGGCAGACTTTCGTTCAGAAGTCGAAACTTACGTACCATATTCGCAGACACACAGGGGAAAATTTGGAAACGTGTACGATTTGTTCTAAAATATTCACAAGCAGTTTTGCGCTAAGGGAGCACATTAAAATACATGATAGCAGAGACGGAGCGAACGCTGCTAAATGTCCTATTTGTGAGAAATGGTACCAGAACGAGAAATGTATGATGAAACACATGCGTGGCACACACACTGGCACACGACACACGTGCCCGATATGCCGCAAGGAGCTCAACAGCGCGGCCTCCTTGCGGGAACATGTGCTCACTCACACAGATACTAAGACGTTTAAGTGTAAAATGTGCCCAAAGAACTACAACGTGAAGCGCACTATGGTCCACCATCTCGGCAAGAGACACAAACTGAACATAAACGACGAGAGTATCCACGAATTCTACGTCAAACTCGACCCGCGCGAGTGCAACCTCAATCTCGACCCAGAAACGATAGAGAGTATATTCGGACCGGCCAAGAAGAAAAACACTGATGTCCTAATTgGTGATTTCGTGACAATCAACAACAAACAGCATCAATCAAGCcaacaaaaagaaacaaattttgTCGAACAACCCCAACCAACACTGAAGGGTCAAGACGAGAAAGGTGGTAAATCATCGGAGAGTGATAGTGACTCGGAGATAGATATTACTATCAAGGTGGAACCACCGGACCAGATGGAAGAAGGGGAACCAGCACTGGAGCCGACCGATTTTGTCAGTGTCAAGATTGAAAGTATGGATTACTAG
Protein Sequence: MNSDDSDEEPLSNLAAFKRKQESEIEIIPVYTDTKKPSKKKKSTKKLCGVTIEVARAESPPVLERPMDVWMYLKDLNPTGPYSCLLCEEWFINRTKIVIHYIVDHRKNFCGICRYFVPDEEAWVTHQTFHKPWPCSQCPQSFEELTDLRSHFSGDHKLVHCRLCHTRVLEEEYNNHLFKKHNMTDVSYKNEDIFWFFENDALDKFKCFLCSKPNNAVKQFVNHYISFHHFTLKCLAPQLCGKNYEFKIKGADLTPGFIASQLKNFSRFGYVDLEPRTNEPIEMVQTFDVRIKEEVQSETEDNDAQGKKNTLKNVVPLTSENPDHVLNIPDSYPGEENFDVTLMELILINQCYYDYLRETVKSIESNTMPNSVINYETAIADKLIDVECSLCSDKYTTLNTFVSHMSKMHCVKMLPTFSCRICAAPFDNLNELSYHMNQELGDFEDLWICQFCDKEFDDREKTRIHLCEHWDTLEESNCFSPHLGFKCKYCPVLFWNEPDREAHQIKEHFSNYKEDFYKCGRCDKLFSDKVWFIYHFIQRHQAANASPLYLVKCCICCLSLPTVEDMRIHFDMNHPEATKVFCSLGTCRHKPFSHRKSFQLHLKAFHTRPKKRGDGRSMCAVCGLQFLTARACAAHAAQAHRLSCAICQLKLSTLDERKIHYLIHHPGRHPFQCDVCEKSFQYKSSLYLHKHEHSPNKQDYVCTYCEKVFKKRDSYREHLAIHAGARHACSYCPAMFVQRSNMLRHERRHTGERPYTCPQCPRTFADKGAATSHARTHQKEPSFSCMYCGQTFVQKSKLTYHIRRHTGENLETCTICSKIFTSSFALREHIKIHDSRDGANAAKCPICEKWYQNEKCMMKHMRGTHTGTRHTCPICRKELNSAASLREHVLTHTDTKTFKCKMCPKNYNVKRTMVHHLGKRHKLNINDESIHEFYVKLDPRECNLNLDPETIESIFGPAKKKNTDVLIGDFVTINNKQHQSSQQKETNFVEQPQPTLKGQDEKGGKSSESDSDSEIDITIKVEPPDQMEEGEPALEPTDFVSVKIESMDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836914; iTF_00834998; iTF_00837903;
90% Identity: iTF_00836914;
80% Identity: -