Istr024518.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- egg
- Assembly
- GCA_951213275.1
- Location
- OX577874.1:3943518-3970503[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6 1.1e+04 -3.3 0.0 47 58 180 191 179 225 0.68 2 3 1.2 3.8e+03 -1.8 0.0 28 38 833 861 810 863 0.65 3 3 5.7e-13 1.8e-09 37.7 0.0 4 75 893 957 890 959 0.90
Sequence Information
- Coding Sequence
- ATGTCGTTTTGTGAATTTACTCAGAGTAACGAGGTACCAAACTGTTCGGGCCGCCAACTGGATTTGGTATTAAGTGTGGGTTTAGATGGGGAGGTACGTGTATTGCCGGCCGACCAGGCTGTACTGTTAGTTGACCCCTATCATCCCCCGCTGCGCGTGCGCATCCCAATACGACCCCGACGATTCGGCGGCCTCGCAGCTGCTAGTGGCTCAAGCAATCAGCGTGTACATATATCAAGCCTAGCATTAGGTGACGTGCAAACGGCGCTCGCCAGTTTAAAGCCTAAACGATCCGCGGGTCCAGACGGTATCCCGGCCTTTTTATTTAGAGATTGTCGTAGACTGCTAGCTGCACCGTTACTACATATATTCAACGTCTGTCTAAAAGTGGCTTCCTTTCCCAACTATTGGAAACTCACTAGAGTGACACCGGTACCGAAAGGTAAGACAGGGCCAGATGTGAGCGGTTACAGACCAGTGGCGGTATTATCAACACCAGCGAAAGTATTTGAGTCGGCTattcaaaaatgtttatatgAACAGATAAAAAACTACCTCAAGGACCAACAGCACGGCTTTCGACCAGCCAAAAGTACCGCCACTAATCTACTCGATTTTGTTTCCTATGTCACTCCTAATGTGGATGCGGGCACACAGGTAGACGCGgtctattttgattttaaaaaagcgTTTGACTCAGTAGATAACgacattttactttttaagttcGCGCGTATGGGTTTCACTCCGCATTTGCTCCATTTTTTCGCAAGTTATATGAAAGACCGTCAGCAGTTCGTAGAATATGCAGGCTGTGAATCTGAACCATATTTTACTAGATCGGGTGTGAGCCAGGGCAGCAATTTGGGTCCCcttgaatttataataatgGTCAATGACTTACCTGAAGTGGCTCATCATGCTACTTGTTTACTGTTTGCAGACGATCTTAAATTGGTTTATGCGGTGAGGGATGAGAGTGACTGTAAACGTTTACAGAGTGACATTAATAGTGTAGTCGAGTGGAGTCGTGCTAATAACTTGTTATTTAACGAAGCCAAGTGTTCAGTGATGACATATTCCCGTGCACATAGGCCCATAAAGTACGAATATACTATGGATACAGTGCCGGTGCAGCGTATTTCCAAAATGCGCGATCTGGGAGTACTCTTTACAGATCAATTATTGTTCCGCGAGCATGTAGTCAAGGCTTGTAAGAAAGCGTTCAGAAATCTAGGCTTTATACTTAGGCAAGCACACGCCTTTACAAATATAAGCGCTGTAAAAGCATTGTACGATGCTCTGGTCAGAAGTCACCTGGAGTACAATGCGATCGTATGGGCTCCTCACGAAGCTAAATATGTCACAATGTTAGAGCGCATACAGAATAAATTCACGCGATATTTGTATCTTAAATTATATGGGGTCTATCCTTTTTACCCTCTAATGTACCCTACCCTGTTTGTGCTCGGAATGGTCGGCTATAACGAGTTAGAGGATGACCATGCCAGTCCGTATCTAAGGAGCGCATTAGAAGAACCGCCGGCTAAACGACAGAATATTGGTCCCACACTAAATGATACAGAAaTACCTCCAATCCCGGATTCAGCTAAACAAGCTGACGACGATCGTGACGTGTCCGTGGTGCTGCTGTCAGCTGAGTCGGCCCCCGAGGACCTGCCTCCCCCGGGGGACGTGGTCCGTCCACCGCTGCGCGTGGGCATGCATGTCCACGCGATGAGGAACGCGTTCGGTAGCTGGCTCAAAGGCAGGATATTGGATATACAGCCTAAAGTTCCTGGGcaACCATATACGAACTGTCGTGTGAAATTCGATCACAACATAAAGAACCCGTGCAAAGTGTTGCCAGCTCGATGTATCGCATATCAGGAACCTTGCAGCGTCAGAATGACTATAGGTACCAGAGTACTAGCGCTATTCAAAGACTCAAATAGGAAGGAATCCTTCTATTCAGGAGTTGTTGCTGAGATACCAAATCCAGTCAATACTTACCGTTACCTAGTATTCTTCGACGATGGTTACGCTCAATACGTAAAGCACAAAGACACTCGCCTCGTGTGCGAGTCCAAATCAACAGTATGGGAGGAAGTCCATCCGTTTATCAGAGACTTCGTCAaggattatttattgaaatatccCGAGAGGCCTATGGTTAGGCTTCATGCTGGACAGAGGCTTAACACTGAATGGAATGGAAAATGGTGGACTTCAAAAGTGTTGCAAGTAGATGCATCTTTAGCGTATGTACACTTCGAAGAGGACGACCGTACAGAATGGATATACCGCGGCTCCACTCGCCTTGCGCCGTTGTACTTAGAACTACAAGCCGCTGGCAGATCCAGGACGAGGTTACCGAGAAGTAAAGCGCAGTTTAGGACTAACATGCCCTACGTTGAATATATGAGATCCGAAGAACAAACTAAACTACAGCAGCAATTACAGCAAGAGgaaatgaTTCGCCGTCAACGTGCTGTGGCTAAGAAATCGGTAACTTTGCCTCAGCCTACACCAATGGTAGACAAACCGGATAATGTTACTAGCAGAGTTGTCTACTACACACCTAAAAATGCaataaaaccttacaaaatGGTGACCCATACTTGCGGCCCGCAATGTAAACGGACAGACGTCCTATCTTTGAAGGAATTACGTACATACAACCCATTGGCTAAACCGTTATTGAGCGGGTGGGAGAGAATGCAAGTCCGCTTCAAAGGTAGCAAGCACATTATGTACCGAGCGCCGTGCGGGCGTCGAATCCGCGACATGGGTGAACTACATCGTTACCTACGCATCACCCAGTCGGACTTCCCCGTCGATCTGTTTGATTTCAACGTCAACACGCATTGTTTGGCCGAGTTTGTGTTGCACAAATATAATGTTATGAAGAAgGACCTATCCCACGGCAAAGAGAGCGTACCAGTCCCCTGTGTGAACTACTACGACGAATCCTTGCCAGAGTTCTGTTCATATAACACGGAAAGAACTCCCACAGCCGGCGTACCATTGAACCTGGATCCGGACTTCTTGTGTGGATGCGATTGCGAAGACGATTGTATGGATAAATCAAAATGCGCATGTTGGAAGATGACTCTAGAAGGCGCTCGGACAATAGGCCTCGACTCACCCAATGTTGGCTACGTATACCGGCGGCTGCCTGAACCGCTACCTTCTGGGATATATGAGTGTAATTCTAGATGTAAATGCAAGAGTACATGCTTAAACAGGGTAGCACAGCATCCTTTACAATTGAAATTACAGGTGTTCAAGACGATAAAGCGTGGTTGGGGTATCCGAGCACTGAACGACGTACCCAAGGGGTCCTTCTTGTGCGTGTACGCAGGGAACTTGCTCACCGACGCTACTGCCAACTTGGACGGTTTGAACGAAGGTGACGAATATTTAGCTGAACTGGATTATATAGAGGTGGTAGAACAGATGAAGGAAGGCTTCGAGGAAGATATACCAGATGCCGATAAGAAACTTGATAAGaAGGAATCGAAACAACCATCAAGTGAAGATGAAGTAACGGAATCCGAAGAAGACAACCGGGATAGCGATAAGAATGATAAAGAAGATGATGATTTTCAACCTGGGTATATTGGTCTGGGACTTACTGAGTTCAGTAAACGTCTCCGAAAGCGCggcaaaaagaaacagaacgaTGCACAGAATGACAAGGAGAATTCTACCGACGCACAGAAAACTGATGACTGCATTACTATTAGTGACGATGAAGAAGtaagAGAACCATCTAGATTCACTGCGCAAGCTGGTATGGGTGATAAGGgatttatatctaaatatagttcTGTCCGTACGTTGTTCGGCAGAGATGAGGCGTGCTACATCATGGACGCCAAGGTTCAGGGTAACATTGGCAGATATCTTAATCATTCGTGCTGCCCCAACGTGTTCGTACAGAACGTGTTCGTGGACACCCACGACCCTCGGTTCCCTTGGGTTGCTTTCTTCGCTCTCTCTCACATAAGGGCGGGGACTGAACTCACATGGAATTATAACTACGACATCGGTTCCGTACCAGGGAAGATACTTTACTGTTACTGCGGCGCCCATAATTGTAGGGGAAggcttttgtaa
- Protein Sequence
- MSFCEFTQSNEVPNCSGRQLDLVLSVGLDGEVRVLPADQAVLLVDPYHPPLRVRIPIRPRRFGGLAAASGSSNQRVHISSLALGDVQTALASLKPKRSAGPDGIPAFLFRDCRRLLAAPLLHIFNVCLKVASFPNYWKLTRVTPVPKGKTGPDVSGYRPVAVLSTPAKVFESAIQKCLYEQIKNYLKDQQHGFRPAKSTATNLLDFVSYVTPNVDAGTQVDAVYFDFKKAFDSVDNDILLFKFARMGFTPHLLHFFASYMKDRQQFVEYAGCESEPYFTRSGVSQGSNLGPLEFIIMVNDLPEVAHHATCLLFADDLKLVYAVRDESDCKRLQSDINSVVEWSRANNLLFNEAKCSVMTYSRAHRPIKYEYTMDTVPVQRISKMRDLGVLFTDQLLFREHVVKACKKAFRNLGFILRQAHAFTNISAVKALYDALVRSHLEYNAIVWAPHEAKYVTMLERIQNKFTRYLYLKLYGVYPFYPLMYPTLFVLGMVGYNELEDDHASPYLRSALEEPPAKRQNIGPTLNDTEIPPIPDSAKQADDDRDVSVVLLSAESAPEDLPPPGDVVRPPLRVGMHVHAMRNAFGSWLKGRILDIQPKVPGQPYTNCRVKFDHNIKNPCKVLPARCIAYQEPCSVRMTIGTRVLALFKDSNRKESFYSGVVAEIPNPVNTYRYLVFFDDGYAQYVKHKDTRLVCESKSTVWEEVHPFIRDFVKDYLLKYPERPMVRLHAGQRLNTEWNGKWWTSKVLQVDASLAYVHFEEDDRTEWIYRGSTRLAPLYLELQAAGRSRTRLPRSKAQFRTNMPYVEYMRSEEQTKLQQQLQQEEMIRRQRAVAKKSVTLPQPTPMVDKPDNVTSRVVYYTPKNAIKPYKMVTHTCGPQCKRTDVLSLKELRTYNPLAKPLLSGWERMQVRFKGSKHIMYRAPCGRRIRDMGELHRYLRITQSDFPVDLFDFNVNTHCLAEFVLHKYNVMKKDLSHGKESVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPDFLCGCDCEDDCMDKSKCACWKMTLEGARTIGLDSPNVGYVYRRLPEPLPSGIYECNSRCKCKSTCLNRVAQHPLQLKLQVFKTIKRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGFEEDIPDADKKLDKKESKQPSSEDEVTESEEDNRDSDKNDKEDDDFQPGYIGLGLTEFSKRLRKRGKKKQNDAQNDKENSTDAQKTDDCITISDDEEVREPSRFTAQAGMGDKGFISKYSSVRTLFGRDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVAFFALSHIRAGTELTWNYNYDIGSVPGKILYCYCGAHNCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -