Idim016929.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Idaea dimidiata
Gene Symbol
-
Assembly
GCA_949358125.1
Location
OX442335.1:20356462-20375592[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.00019 0.015 16.4 9.1 1 23 200 222 200 222 0.98
2 13 2.3e-06 0.00019 22.4 0.4 3 23 236 256 235 256 0.98
3 13 6.2e-05 0.005 17.9 2.1 2 23 265 286 265 286 0.98
4 13 0.00039 0.031 15.4 2.1 1 23 292 314 292 314 0.98
5 13 5.6e-06 0.00046 21.2 1.4 1 23 320 342 320 342 0.98
6 13 1.9e-05 0.0016 19.5 8.6 2 23 349 370 348 370 0.97
7 13 1.7e-05 0.0014 19.7 0.7 1 23 376 398 376 398 0.98
8 13 1.4e-05 0.0011 20.0 1.7 1 23 404 426 404 426 0.99
9 13 0.00016 0.013 16.6 0.7 1 23 432 454 432 454 0.98
10 13 0.0032 0.26 12.5 1.3 1 23 460 482 460 482 0.98
11 13 5.7e-06 0.00047 21.2 0.3 1 23 488 510 488 510 0.97
12 13 1.3e-05 0.001 20.1 2.8 1 23 516 538 516 538 0.98
13 13 8.6e-05 0.007 17.5 3.2 1 23 662 684 662 684 0.99

Sequence Information

Coding Sequence
ATGGCTGGAACAACTAGTACTACCACGACAAACACCAAAATGCGTAATTTAAAGTTGGATAAAATATGTAGAGCTTGTTTGGAGATCAAGAGGGACATGAGACCTCTCTTTGAACAACTCACTGCTACGATGTTGATGGGAATTTCGAAAGTGCATGTGTCAGTGGGCGACGGCCTCCCTACCCAGTTATGCCTGCAATGTGTCCACCAGATATCTCGTTGCCACGCGTTCAAAGACCTGGTGGAGAGAAACGACCTCATCCTCAGGGAACATGTCAAGGTGTTGGTTGATGAGCAGCTGAAGAAGGAGCAGGAAGagAAAGAGAAAATCCTAAACATGACCTGTACCGACGACATGCAATACATAGAAGTACCTCTAACCAACCCAGGTCAGATATTGGACGGATTCTTTGGACCGACCACCACACCTGATCAGTCGGAACAACTGGTCAAAGAAGACGAAGAAACGAAAGTTAATGTGGAGGAAAAGAAAGTAGAACTAACAGCGAGCAAAGACGAGGAGGCTCTCAACTCCGACGAAGAGAACTACCTCCAAATGGTAGTATTTCAAGCGACATCAACGATGGCTCCCGGACGGCACGTCTGTAACCTCTGCCACAAGGAGTTCAAGCACGCTCGCTGGCTGAAGCACCACATGAGGTCACATTCCAACTGGATCAAGGCGAATTGCAAGAAACCGCCTATGTGTCCTATTTGCCAGAGGACTTTTAAGGGTCCAGGCATGTTGAAAATGCACATGCGTACTCACGAGGCCCGTCCCCCGAAACAACCGACTTGCTCCGTCTGTCAACGCACATTCCCGACCAAGACGCTCCTCTACCGCCACAGACAGACGCACTTTGAGCAGAAATTACACCAGTGTACTGTCTGCGAGAAAAGGTTCTTCAGTGGATACGCGTTAAGGTCTCATATGGCGCGGCATCGGGGAGAAAGGCCTTATGTCTGTACGAACTGCAATAAGAGCTTCTACAATCCTACTGATTTGAAGGTACATTTCCGTCTGCACACCGGTGAGAAGCCTTTAAAATGTACGGAATGCAACAAGACGTTTCGAAGGCACTCCACCCTGTGCCAGCACATGAAGAAACACCGCGGCATCAGGAACCATGTGTGCAGTATATGCAACAAAGGGTTCTATGAAGTTTCCAAACTTAACGCGCATATGAGAGTACATACAGGAGAGCGTCCGTACGAGTGTCAGTTCTGCACGCGTCGCTTCGCGCAGCAGTCGGCGCTCATCTACCACCGTCGCACGCACACCGGAGAGAAGCCCTACTCCTGCAAGCTGTGTCCTGCCAAGTTCACGACCTCCAGTGCCAGGAACAACCACATGGTCACTCACACGGGACACAAGAGGTTCGTCTGTCCGATCTGCTTGAAAGGCTGCATGTCGAAGACCGACCTGCGCATCCACACGAGCAAACACACGGGAGAGAAGCTCTTCTCGTGCGAGACGTGCGGACAGCGGTTCAGTTCCGCGTCGTACCTCGCCGTGCATCGCCGCGCACACACCGGGGAGAAAAAGTACCACTGCACTGTCTGTGGGAAAGGCTACATAGAATCAAGTTCGTACAAGAAGCACATGAAGACCCACGAGAAGTCAGACGACGGTGAAGACAGTCACGATCACACCGACCACGCTGACAAGATGAAGGCAGGCGATGGTAACGCTGTCGAACAACATGACGGACAGAATCAAGAAGTATCCGGTCAACCAGAGAACCAGACCATACAGGTCCACGTCCAGGAGATCCAGCCGCAGCAGCTCCAGGAGCAACAGGTCCAGCAGGATTATGACGGAAGTCTCTGGTTAAATAGAGTGCGAGAGACCATACAGGTCCACGTCCAGGATATCCAGCTGCAGCAGCTCCAGGAACAACAGGTCCAGCAGGTCCACATCCAGGAGATCCAGCTGCAGCAGCTCCAGGAGCAACAGGTCCAGCAGGAGCCGCAACAGAAGCGGTATAAGTGCGGGATCTGCGTCAAAACTTACATGTACCTGCACAGCTTGAAGAAACATATGATGACGCATATGCCGGAGGTGCAGAAACAAGATCACATCCAGCAACAAGTGCAACAGCAGCAGCAACAACAACAAGTGCAACAGACCGTGCAACAAGTGCAACAGAGCGTAGCGCAGGTGCAACAGAGCGTGGCGCAGGTGCAGCAAGTGACGCCGCAACAAGTGACGCAACACGCGCACTTGCAGCAGTTGCAGCAGATGCAGCAGCAGCAATTGCAGCAGCAGGTGTTGCAGGTGGGAGGGGTGCAGCAGTTGACTGTGCCCATACATCAGCAGTTGCCGCAGAGCATCACCGTTAACGGCGTTCAGCACGCGTACCCGGTGATATCGTCGGTGCAGTCGTTGCAGCTGCAACAGACGCAACAGGTCAACACGCAGCCACAACAACTGCACGTTCAGACGATACAAATACATCCGCAGCAACAGCACCAGCCTATACAAATACATGTGAGTGTTTATATAGACCTACTGTCGCGGAACTTCTTCAATATTATGCCTCCAAAGCAGGCGGTGGGCGTCCAACAAGTTCAGCAACAACAACTCCACGTGGCGACGTCGTCCTGCCAAACCATGCTGCCTAATATACTGCAgTTGCAACCAGCGACCGTAGTATCCGGACTCGGGCAACAGGACCTCAGCGGAGTGGCGCACCGCATCATACTGCAGCAGCAGGGGGCGGGGGGGCATCCCGCCGTCTACACCATACATCACTGA
Protein Sequence
MAGTTSTTTTNTKMRNLKLDKICRACLEIKRDMRPLFEQLTATMLMGISKVHVSVGDGLPTQLCLQCVHQISRCHAFKDLVERNDLILREHVKVLVDEQLKKEQEEKEKILNMTCTDDMQYIEVPLTNPGQILDGFFGPTTTPDQSEQLVKEDEETKVNVEEKKVELTASKDEEALNSDEENYLQMVVFQATSTMAPGRHVCNLCHKEFKHARWLKHHMRSHSNWIKANCKKPPMCPICQRTFKGPGMLKMHMRTHEARPPKQPTCSVCQRTFPTKTLLYRHRQTHFEQKLHQCTVCEKRFFSGYALRSHMARHRGERPYVCTNCNKSFYNPTDLKVHFRLHTGEKPLKCTECNKTFRRHSTLCQHMKKHRGIRNHVCSICNKGFYEVSKLNAHMRVHTGERPYECQFCTRRFAQQSALIYHRRTHTGEKPYSCKLCPAKFTTSSARNNHMVTHTGHKRFVCPICLKGCMSKTDLRIHTSKHTGEKLFSCETCGQRFSSASYLAVHRRAHTGEKKYHCTVCGKGYIESSSYKKHMKTHEKSDDGEDSHDHTDHADKMKAGDGNAVEQHDGQNQEVSGQPENQTIQVHVQEIQPQQLQEQQVQQDYDGSLWLNRVRETIQVHVQDIQLQQLQEQQVQQVHIQEIQLQQLQEQQVQQEPQQKRYKCGICVKTYMYLHSLKKHMMTHMPEVQKQDHIQQQVQQQQQQQQVQQTVQQVQQSVAQVQQSVAQVQQVTPQQVTQHAHLQQLQQMQQQQLQQQVLQVGGVQQLTVPIHQQLPQSITVNGVQHAYPVISSVQSLQLQQTQQVNTQPQQLHVQTIQIHPQQQHQPIQIHVSVYIDLLSRNFFNIMPPKQAVGVQQVQQQQLHVATSSCQTMLPNILQLQPATVVSGLGQQDLSGVAHRIILQQQGAGGHPAVYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00835814;
90% Identity
-
80% Identity
-