Basic Information

Insect: Idaea dimidiata
Gene Symbol: Hr39
Assembly: GCA_949358125.1
Location: OX442338.1:3448775-3469040[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.5 5e+03 -2.7 0.1 114 134 75 100 19 169 0.49

2 5 3 3e+04 -6.5 7.4 120 161 264 301 188 332 0.49

3 5 3.6e-08 0.00036 20.8 0.1 1 22 435 456 435 474 0.87

4 5 0.013 1.3e+02 2.5 0.0 77 115 479 517 458 527 0.70

5 5 2.3e-64 2.3e-60 205.9 0.0 203 408 553 759 537 759 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.5	5e+03	-2.7	0.1	114	134	75	100	19	169	0.49
2	5	3	3e+04	-6.5	7.4	120	161	264	301	188	332	0.49
3	5	3.6e-08	0.00036	20.8	0.1	1	22	435	456	435	474	0.87
4	5	0.013	1.3e+02	2.5	0.0	77	115	479	517	458	527	0.70
5	5	2.3e-64	2.3e-60	205.9	0.0	203	408	553	759	537	759	0.94

Sequence Information

Coding Sequence: ATGTCGATAGAGGGGGAAGCTGTCAAAGTGGAGGGCGGTCACGTGTCAGTTACCACCATCAGTATGTCGGGCCCTGAGAGAAACAATGGCCAGTTTTCGTATAGTTCCAGTGGCATCCGCATCAGTGTGTCTTCGGAACCCCACGACGAAGACTCCACTGATGCTGAAATCTCCAAGATCGATTTCAACCAACATCAATATGAGGTCAACATGCGGAATAAGAAGATGCGATCATCGAGCGGCCAGTTCGAGAGTCAAGCTTGCGACAGAGAGCGGCCGATGTCCTGGGAAGGCGAGCTGTCCGACTCCGAGATGGTCATTGACACCAGTGTTAATAATGACGAAAACAGCAACTCATTGGACCTCCAGTCATCCAGAGATTCGATCGATACCCTTCGCAACGTCATCATAAAGACTGAACCCTTAAAGACGGAGTTACAGACCATGGATGATCAGAGGGTACTAGATCTGAAGTATACGGCGCCTTTGCAACCACATCAAAGGAGTCTTAGCATGAATAGGATACCTCTTCTATCAGACGTACCTCTTTCTTTACCAAGAAGGCCGTCGTCCCCAACTAGCAGTGCAAAGTCTCTGGCTTTATCCGATCACGGCTCCATGCCCATCATGCCCCATACCCCCATCGGAGAAGTGCAGAACTTGACCATTAAAAAGGAGACTCTATCAGAGTTGAAATGTGAGCCATCGAGTTTGGACAAGCTGATCGGTCAGCACGGATCGCCCCTGCTTGGCAGGTTAGCGCGGGTCCAGTCCAGTGCTAGCACAGATTCCGCAGTACATTCCATGTATACACATAGCGTATACAGCAGCCCGTCGGCCAGCCCGCGCGCATCGCGGCACTACACTCCGTCTCTCTCTCGCAACAACAGCGACGCATCGCACTCTTCCTGTTACTCCTACAGCTCTGAGTTCTCGCCTACTCACTCGCCTGTCCAGGGGCGTCACCCGCACCTGGTATACCGGGAGGCACCTGGTGTGTTTCCCGCATCACCAGCTCACGACGAGGATGCGGAAACTGAGGACCGGCTGCATCACCACCAGGGAATCAGCAGACAGCAGCTTATCAACAGCCCATGCCCCATTTGCGGCGACAAAATAAGCGGGTTCCACTACGGAATCTTCTCGTGCGAGTCGTGTAAAGGTTTCTTCAAGCGAACCGTTCAGAACCGCAAGAACTATATGTGTTTGAGAGGAGGGAACTGTCCCGTCACTGTTGCCACTAGGAAGAAGTGCCCTGCGTGTCGGTTTGACAAGTGTTTGGGATGCGGGATGAAGTTGGAAGCTATAAGAGAGGACAGGACCCGCGGCGGTCGCTCGACGTACCAATGTTCGTACACACTGTCAGGCGCCGCGTCAACCGGGTCGCTGCtggccgcgccgcccgccacgCTGCGACACGCCTCCAGTCTCACTAGTgtAAACGGCCCAGGGTCCTATAACAATCGGGGAGAGTCAAGTAATAGTCGACTTACGCCAGACATTCCGCCTTTACTCCAAGAAATAATGGATGTGGAACATCTATGGCAATACAACGAGTCGGAATTGAACCGTCTCGGCAAAACTGGGGCGGGCGCGGGTGCTGGAGCGAGCAGTCCTTCAGCCAACCCCTTGCTGGCAGCCAGTGGGATCACGGCACAGAACTCCAGCCCCGATTTCCTGGCCGACCTGTGCAATATAGCGGACCACAGACTGTACAAGATAGTCAAATGGTGCAAGAGTTTACCGCTCTTTAAGAATATATCGATAGACGACCAGATCTGCCTGTTAATCAACAGCTGGTGCGAGCTGCTCGTGCTGTCGTGCTGCTACCGCGGGGTGAGCACGCCGGGGGAGGTGCGGGTAGGGGGAGGGAGGGGGATCACGCTGCAGCAGAGTGCCAAATTAGGATTAACACCTTGTATAGAGAGGATGCTGAGTTTCACAGACCACTTGAGAAGGTTAAGGGTAGACCGCTACGAGTACGTCGCTTTGAAAGTCATCGTCTTGCTCACGTCCGATGCCCCGGAACTTCGTGAGTCGGAAAAGGTTCGAGCATCGCAAGAGAAAGCGCTGGCAGCGCTTCAAGCGTACATCGCGACACACTCGCCACAAACACCCGCCAAGTTTGGAGAACTGTTGCTCAGGATACCGGAATTGCAGCGGACTTGTCAGtTCTTCATGCAAGTCGGCAAAGAAATGCTCAACCCAGCGAATAAGAACAAAGACGGCGAAGGTCCAAGCTTCAACTTGCTCATGGAACTCCTGAGAGGTGACCACTGA
Protein Sequence: MSIEGEAVKVEGGHVSVTTISMSGPERNNGQFSYSSSGIRISVSSEPHDEDSTDAEISKIDFNQHQYEVNMRNKKMRSSSGQFESQACDRERPMSWEGELSDSEMVIDTSVNNDENSNSLDLQSSRDSIDTLRNVIIKTEPLKTELQTMDDQRVLDLKYTAPLQPHQRSLSMNRIPLLSDVPLSLPRRPSSPTSSAKSLALSDHGSMPIMPHTPIGEVQNLTIKKETLSELKCEPSSLDKLIGQHGSPLLGRLARVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHLVYREAPGVFPASPAHDEDAETEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLAAPPATLRHASSLTSVNGPGSYNNRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELNRLGKTGAGAGAGASSPSANPLLAASGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLQQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELRESEKVRASQEKALAALQAYIATHSPQTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00033911;
90% Identity: iTF_00837595;
80% Identity: iTF_00836675;