Idim001131.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949358125.1
- Location
- OX442326.1:17257767-17263420[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-77 2.4e-72 244.5 20.1 1 268 30 292 30 314 0.90 2 2 0.11 3.2e+03 -2.2 11.6 207 270 310 371 287 390 0.56
Sequence Information
- Coding Sequence
- ATGTTAAATAGAGACCTGATATCCAGTTACTTACAGGATTTACATACCACAGGACTAAATACTTACAGGATCCATCTGTTCTTCCAGGCTGAACAGCGTCTTGCCGCTCGACGTGCGGCGAGGGCCGAGGCGCGGGAGATTCGCATGCGAGAGTTAGAGCGACAACAGAGGGAGCAAGAGGACCATGCCGACAAGGCGTATGACATGTATGCCGAGACAGTAGGTCGCCGCGCGCCGCGGTTGGCTGCCCTCAGCCCGGCCGCTGTACACTCGCCGCGACGCAGTTCCGAGGACTCAGATGATACCTTTAGTATCAAAGATTTAAGGCATGAGCTGAAGGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGATAACGACAAGGCGGCGTTAGGGTATCAGCTGGAACTGCTCAAGGACAGGATCGAGGAGTTGCATGAGGAGCACGCGCAGTTACAGCGGGAACACCGCGAGAAATGCTCACTACACGAGCGTCTAAAGCGGGAGTACGTGTCGTTAGAGCGGGAAGTGAGCGGCGCGCGGGCGGGCATCCTCGCGCGGGACCAGGCGGCCTGCGACGCGGGGTACGCGTTCGTGGACGCGGGGGAGGGACAGGGCGGGGGAGGGGGAGGACAGGCGGATGCCTCCAGAGTGCCCGCGCTGGCGCTTGTGTCGCACGACGCGCAGAAACTGCTCGATGATGCTGGGGAAGGGACGCTTGACGTCCGGTTGGCCAACCTGGCGAGCTCGAAGCAGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGACGCTGAACGAGGAGCGAGCGGCGCGGCAGAACGGAGCCGCCAACCATCACGACGACGATATCGAGACTGAATTGGAGAGCCTACGTCGCGGGCTAGCGGAGGCGAAGGgtcgcgcggcgcgggcggaggCGGAGGCGGCGCTGcaggcggcgggcgcggcgcggctTGACGCGCAGCTGTCGCGACTGCGCGCCAAGCAGGACCTGCATGACGACCTGGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCCCGCGAAGCCCTGAACCGAGTGGAAGAGCTGGAAACAGAGAACAGCCACCTAACGAAGAGACTCGACAAGCTGAAGAACGCCAAGTCCGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MLNRDLISSYLQDLHTTGLNTYRIHLFFQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAPRLAALSPAAVHSPRRSSEDSDDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHREKCSLHERLKREYVSLEREVSGARAGILARDQAACDAGYAFVDAGEGQGGGGGGQADASRVPALALVSHDAQKLLDDAGEGTLDVRLANLASSKQALESEVRKLKLTLNEERAARQNGAANHHDDDIETELESLRRGLAEAKGRAARAEAEAALQAAGAARLDAQLSRLRAKQDLHDDLEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -