Idim018039.1
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- -
- Assembly
- GCA_949358125.1
- Location
- OX442336.1:13518622-13519911[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-11 3.5e-08 33.7 0.0 2 37 18 52 17 59 0.89
Sequence Information
- Coding Sequence
- ATGCCTTTAACATATAAGAGGAAAAGTGGAGTATGTAGAGGAGAATGGACAGAAAGAGCATTAATTGATGCTTTTCAAGCTGTTTCTAATGGAATGGGTATCAATGAAGCAGCAAAAACATTTGGGATACCTAAAACTACATTTAAACGAAGACTTGCAAAAAATTCCTTAACTAAAAGCGATGTTCTCGGTCCCAGTTGTATACTTCTGCCTGAAAATGAGAAGAAGATCGTCGTACACattaaaaaattacagaaaagtGGGTTTACGCCATCAAGAGAAACAGTTCGTAAAATGGCATATGATTTAGCGGAAAGACTTCATATTAAACATAACTTTAATCACGAAAAGAAAATGGCGGGAAATGGGTGGTTACAAAGCTTTCTTAGACGAAACAATGAACTTTCAATCCGGCAGTCAGAAGGTGTCTCTGTGGCCAGGGCTAAGGGGATGAATAAAGAATATGTTGATAAGTATTTCAACCTTTTAGAAGAAGTTTTGAAAGAAAATCAACTTTTTGACAAACCTGGCTCTATTTTTAATATGGACGAGACAGGCTTGCAGCTAAATAATAAGCCGGGGAAAGTAGTTGCCGTGAAAGGATCGAAAAATGTTCCTAACATAACTGCTGGGGAAAAAGGTGAAACCATTTCGGTCATCGCTTGCTACAGTGGAGAAGGTGTTTTTCTTCCACCCTATTGCATATTCAagggcaaaaataaaaaacctgagTTTGAGGATGGCATGCCACCCGGCTCTGTGGTAACAATGTCACAAAAATCAGCATATGTGaattcagaaatattttttgattggCTGAAGCATCATTTTTTGCCAAGGAAACCACAAGGTAAGTGCGTGTTGATCCTTGATGGACATTCTTCACACTGCAGCAATGTGGAAATGTTGGAGTTTGCTGAAGAAAACGAAATCATTTTGATTTGCTTACCCAGTCACACAACCCATTTCCTTCAGCCGCTTGATAGAACGTTTTTCAAGTCCCTGAAATGCTTTTATTATGACGAATGCAATAAATTCATTACTGCTAACCCATCAAGAAAACTATCACGCTTGCAGTTTGGAAAAATTCTGGCTTCAGCTTGGAATAAATCAGCTTCAGTGAGCAATGCAATATCAGGTTTTTCAGCAACTGGAATCATACCGTTTAATGCAAACGCCATACCAGACTATGCTTTCTTAACTCCAAGTAACCAAAACCATGACAATAACCTACAAACTGCTGCTATAATTCAACATGATCAGCCTACTAAAGAATCAGTCCTTTCTTAG
- Protein Sequence
- MPLTYKRKSGVCRGEWTERALIDAFQAVSNGMGINEAAKTFGIPKTTFKRRLAKNSLTKSDVLGPSCILLPENEKKIVVHIKKLQKSGFTPSRETVRKMAYDLAERLHIKHNFNHEKKMAGNGWLQSFLRRNNELSIRQSEGVSVARAKGMNKEYVDKYFNLLEEVLKENQLFDKPGSIFNMDETGLQLNNKPGKVVAVKGSKNVPNITAGEKGETISVIACYSGEGVFLPPYCIFKGKNKKPEFEDGMPPGSVVTMSQKSAYVNSEIFFDWLKHHFLPRKPQGKCVLILDGHSSHCSNVEMLEFAEENEIILICLPSHTTHFLQPLDRTFFKSLKCFYYDECNKFITANPSRKLSRLQFGKILASAWNKSASVSNAISGFSATGIIPFNANAIPDYAFLTPSNQNHDNNLQTAAIIQHDQPTKESVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281108;
- 90% Identity
- iTF_00000252;
- 80% Identity
- -