Basic Information

Insect: Idaea biselata
Gene Symbol: -
Assembly: GCA_958496205.1
Location: OY292406.1:14239946-14255143[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 5.9 4.3e+02 2.4 1.0 1 23 236 259 236 259 0.89

2 25 0.0035 0.26 12.5 0.2 2 23 285 307 284 307 0.95

3 25 3.7 2.7e+02 3.0 5.1 1 23 330 352 330 352 0.96

4 25 0.13 9.4 7.6 0.3 1 23 356 378 356 378 0.91

5 25 0.041 3 9.2 2.6 1 23 382 405 382 405 0.93

6 25 3.5 2.6e+02 3.1 0.8 2 23 411 433 410 433 0.93

7 25 0.01 0.74 11.1 0.3 1 23 440 463 440 463 0.97

8 25 0.16 12 7.3 4.1 1 23 469 491 469 491 0.95

9 25 0.014 1.1 10.6 0.5 1 19 500 518 500 518 0.97

10 25 0.037 2.7 9.3 0.8 1 23 558 580 558 580 0.96

11 25 1.8 1.3e+02 4.0 0.1 3 23 610 631 608 631 0.85

12 25 0.028 2.1 9.7 0.5 2 23 652 674 651 674 0.95

13 25 0.00069 0.051 14.8 2.2 2 23 680 702 679 702 0.95

14 25 0.0017 0.12 13.5 1.4 1 23 707 730 707 730 0.95

15 25 1.7 1.3e+02 4.1 0.6 2 23 733 755 733 755 0.93

16 25 0.00096 0.07 14.3 1.3 2 22 762 782 761 782 0.95

17 25 0.047 3.5 9.0 0.6 1 23 838 861 838 861 0.89

18 25 0.098 7.2 8.0 0.0 3 23 890 911 888 911 0.92

19 25 0.43 32 6.0 0.3 3 23 935 957 933 957 0.95

20 25 0.00083 0.061 14.5 0.4 3 20 964 981 962 985 0.90

21 25 0.14 10 7.5 0.5 1 23 990 1013 990 1013 0.97

22 25 0.00062 0.046 14.9 0.2 2 23 1019 1041 1019 1041 0.94

23 25 6.8e-05 0.005 17.9 4.7 1 23 1045 1068 1045 1068 0.97

24 25 0.001 0.075 14.2 0.5 2 23 1075 1096 1074 1096 0.96

25 25 0.025 1.8 9.9 1.7 1 23 1102 1125 1102 1125 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	5.9	4.3e+02	2.4	1.0	1	23	236	259	236	259	0.89
2	25	0.0035	0.26	12.5	0.2	2	23	285	307	284	307	0.95
3	25	3.7	2.7e+02	3.0	5.1	1	23	330	352	330	352	0.96
4	25	0.13	9.4	7.6	0.3	1	23	356	378	356	378	0.91
5	25	0.041	3	9.2	2.6	1	23	382	405	382	405	0.93
6	25	3.5	2.6e+02	3.1	0.8	2	23	411	433	410	433	0.93
7	25	0.01	0.74	11.1	0.3	1	23	440	463	440	463	0.97
8	25	0.16	12	7.3	4.1	1	23	469	491	469	491	0.95
9	25	0.014	1.1	10.6	0.5	1	19	500	518	500	518	0.97
10	25	0.037	2.7	9.3	0.8	1	23	558	580	558	580	0.96
11	25	1.8	1.3e+02	4.0	0.1	3	23	610	631	608	631	0.85
12	25	0.028	2.1	9.7	0.5	2	23	652	674	651	674	0.95
13	25	0.00069	0.051	14.8	2.2	2	23	680	702	679	702	0.95
14	25	0.0017	0.12	13.5	1.4	1	23	707	730	707	730	0.95
15	25	1.7	1.3e+02	4.1	0.6	2	23	733	755	733	755	0.93
16	25	0.00096	0.07	14.3	1.3	2	22	762	782	761	782	0.95
17	25	0.047	3.5	9.0	0.6	1	23	838	861	838	861	0.89
18	25	0.098	7.2	8.0	0.0	3	23	890	911	888	911	0.92
19	25	0.43	32	6.0	0.3	3	23	935	957	933	957	0.95
20	25	0.00083	0.061	14.5	0.4	3	20	964	981	962	985	0.90
21	25	0.14	10	7.5	0.5	1	23	990	1013	990	1013	0.97
22	25	0.00062	0.046	14.9	0.2	2	23	1019	1041	1019	1041	0.94
23	25	6.8e-05	0.005	17.9	4.7	1	23	1045	1068	1045	1068	0.97
24	25	0.001	0.075	14.2	0.5	2	23	1075	1096	1074	1096	0.96
25	25	0.025	1.8	9.9	1.7	1	23	1102	1125	1102	1125	0.96

Sequence Information

Coding Sequence: atggaGTTCAGTGAGGTATCTGTGAAGGACAGTCCCGGGCTGTGCCGGTGTTGTCTCTCTGAAGGATGTTACAAAGACTTGGGCACAGAATACACTTGGATGAAAGAAACTGAAGTGTACGCCGATATGCTGCTCGATTGCTTCGATGTTGGCataacTCAACACAACGATGGACCAAACGGCCCCAAACGCCTCATCTGCGAAGTGTGCATCACGCGGCTGCGGGACGCTTGCAACTTCAAGAAGCAGGTGCTGGAGTCGGAGACCAGGTTCATTGACATGCTGGGCCGAGGAGAGTTCCGGAGTAAAGTGTTGGTGTACTCTCCGCAGTCTCCGCTGAAGACGGAAGCGGTGGAAGTGACTTTTGAGGAGACGGATGCCACCGAGGTCGACTATCTGGACGATATTGATTTCCAACCCTCAGACACGGAGCCCCTCTCTACCATAAAGCGCGAGGCCCGGGCGGAGCGCCCGCGGGCGGAGCCCCGCAAGCGCGGGCGGCCGCGCAAGGAGCCCGCGGAGCCTCCGGAGAAGAAACACAAGAAAACAGAACTAAAGAAGCCTAAAGTTGCTAAAGGTGACGGAAAAGAGGCTCAGAGTAAGTCCTCTCTGACATCCGCCAAACGCTACAAACTTGTAAAGGAAAACGCTGTGACAATACTAGAGTGTTCAACAGCGGTACCGTTCAAATGGCAGCTCCACAACTACCTATGCTTCTATTGCCATCTAACTTTACCATCAATAGACGATATCAAACAGCATACAGCCCAAAAACACAAACAATCCAAGCCAAAAAACGCTGTTTCCTGCCTAGTCCGAGATACGAAAGTCAAAATTGAAATAAGCGTTCTCAACTGTACCATATGCGGAGAAAACTTTGAAAATTTCGGCAAGTTTATCGAACATCTCAAAGTCGATCACGACAAGAAGTTCAACCCGGGAGGTTACGGCGTTCTTCCGTATAAAATCGACACTAAAAATAGTGTTTTTCAGTGCGGAGAGTGTTCGGAAACATTTATATATTTCATCAAATGCAACCAACATATGAACCACCACTTTGGGACTTATATCTGCGAGCTCTGCGGCAAATCTTACCTGTCAGAACAACGGCTTCGCGCTCACTCTCTGAACCACGGCTTCAAATTCAAATGCACAAAATGCCAAGAGTCCTTTTCCTCGATGATAAAGCGGACAAAACACGAGAAGCAAGTCCACAACCACAGTCAGATAAGCTGCAGTTACTGTTCTGCAACCTTCCTGAATTACAGAGCGAGGAAGCTGCACTATCGCTCTGACCATAAGCTAACGTTAAAGGAGTATCCTTGTGAGGTCTGCAGTCTGAAGTTCCTTCAACTGAGCAAGCTTAAACAGCATATTCTGCGAGTTCATGAGAAGACTGCCCACCATTGTTGTGCAGTCTGCGGTCGGAAATACTTCGAACGTCGGGAATATATGAAACATATCGCCAAACATGAGGGGGATAGAGGGCACGAAGGATTTACTTGCAATTCGTGTGATAAAACGTACGCTAAGAAGAAGGCGTTGGCGGAACATGATTGTAAAAAAGGGAAGAAGGGTAAACGCTGCGAAACCTCCTCAATGCGGAGACGGAACAATctccaaatattatttaataacaccaCCGTATTGCCATTTAAATGGAGAGGCAAATATCTGTGTTTCTATTGTAGCAAAGACGCCTCAGAATACTCGGAATTGATAACCCATACGAAAACCCACGGAAAATGCTCAATAAACGACTATTCCTTGAAGGTTTTAAAGGGAGGACAGAATATGGAGATAAAAATTGatatttctaatattaattgtaaagtttgtagtcAGAAATTTGATTCTGTGGATACGATTGTTAGTCATTTAGTCTTAGAGCATAAGTTGGAGTACGATCTCGATGTAGACATGGCGACAGAAGAATACAGGCTGTCTGATCTCAGCTGCTTAGTTTGTAAAGAGAAATTTACGTATTTTGGCTATCTAGTCTCACACGTCAATATGAAACATCCAAAGAACTGTCTAATCTGCGACCAATGTAATCAGAAGTTTAATAAGAAAAGAGACTTGTTCTCCCATATGAAGAATTATCACAAGGAAGGGGGATATCAGTGTGAATATTGCCCTCAAAGCTTTAGTTCTTTAAATATATTAAGGAAGCATAGAAGTAATAGACACGTCGCCAGTTGCAGTCTATGCCATTTGAGGTTACCGTCTGCCGCTTTAAAGCAAAAGCATATGGAACTAGAACATCCTGACGATGGTTGTCTCCAATGCGACAATTGCGACAAAGAATTCCACACAAAACAGGGCTTACGGATGCACCTCCGGAAGTGCAAAGGAGTTTACGAATTCATTATCAAAAAAGAAGATCTAACCATGGACCTGGACCAAAACTACGATCTAACGAAACGACCAACAGTTAAACAGATTAGAGAAAACATTGTGGCTGTTCTAAATATGTCGACGGCTATACCTtttaatttctataaaaataagtttaactgTTTCTATTGCTCTAAAGATTTCCAAGATTCAGACGCAATGAGAGAGCATACAGTACTAGAACATCCTATATGCGACGTCAAAGATGAATGCATTAGAAAATGCAAAGAGTCAGTTGCTTGCGTCAAAATTGACATCTCAACGCTAGCCTGCAAAATCTGCTTTGAGTCCTTACCAGATTTGGATAATTTGCTTGATCATTTGATCGGGAAACATGACGCGAATTACGATAAGGCAATCAAGACTTGCCTTCAACCGTACCGTCTTATAAAAGACCATATGGCTTGCCCGAACTGTCCGGACGAGACCTTTCGTTTCTTCGGAACTTTACTCAAGCATGTCAACAAGAAACATACGGATAACAATATCATATGCGTCTACTGTGGGGAAACCTTCCGAAGAGACCAGAACTTACGCGTGCACATCTGGAGACATCATCGAGATGGCAGATTCAGGTGTAACCTCTGTGATGCTGAATGCAACATCCCCTCACGCCTGTACATGCATATGGCGAAAGCTCATGGCGTGAAAGCCGCTAAATGCCCAAAATGTCCTGAAAGCTTTGCGACACAGTATCTACGGCAGAAACACTTGATAGAAGCCCATGATTCGGGACATAAATGTTCGTATTGCGGTAAATTGTTTACCAGAAACTCGTTCATGAGAGACCACATCAGACGCACACATCTTAAAGAGAAAAACGTCGAGTGTTCCATTTGTAATATGAAGTTCTTCAACAATATTCTCTTAAGGCGGCATTTAGTAAGACATAGTGGAGAGAAGAATTTCCATTGTGAAGTATGTGGAGAGAGGTTTTTCTGGAGGAAAAGTTTAAGAACTCATATTGCAAGGAATCATAAACAGTTGGAGGCTATTCATATGTAA
Protein Sequence: MEFSEVSVKDSPGLCRCCLSEGCYKDLGTEYTWMKETEVYADMLLDCFDVGITQHNDGPNGPKRLICEVCITRLRDACNFKKQVLESETRFIDMLGRGEFRSKVLVYSPQSPLKTEAVEVTFEETDATEVDYLDDIDFQPSDTEPLSTIKREARAERPRAEPRKRGRPRKEPAEPPEKKHKKTELKKPKVAKGDGKEAQSKSSLTSAKRYKLVKENAVTILECSTAVPFKWQLHNYLCFYCHLTLPSIDDIKQHTAQKHKQSKPKNAVSCLVRDTKVKIEISVLNCTICGENFENFGKFIEHLKVDHDKKFNPGGYGVLPYKIDTKNSVFQCGECSETFIYFIKCNQHMNHHFGTYICELCGKSYLSEQRLRAHSLNHGFKFKCTKCQESFSSMIKRTKHEKQVHNHSQISCSYCSATFLNYRARKLHYRSDHKLTLKEYPCEVCSLKFLQLSKLKQHILRVHEKTAHHCCAVCGRKYFERREYMKHIAKHEGDRGHEGFTCNSCDKTYAKKKALAEHDCKKGKKGKRCETSSMRRRNNLQILFNNTTVLPFKWRGKYLCFYCSKDASEYSELITHTKTHGKCSINDYSLKVLKGGQNMEIKIDISNINCKVCSQKFDSVDTIVSHLVLEHKLEYDLDVDMATEEYRLSDLSCLVCKEKFTYFGYLVSHVNMKHPKNCLICDQCNQKFNKKRDLFSHMKNYHKEGGYQCEYCPQSFSSLNILRKHRSNRHVASCSLCHLRLPSAALKQKHMELEHPDDGCLQCDNCDKEFHTKQGLRMHLRKCKGVYEFIIKKEDLTMDLDQNYDLTKRPTVKQIRENIVAVLNMSTAIPFNFYKNKFNCFYCSKDFQDSDAMREHTVLEHPICDVKDECIRKCKESVACVKIDISTLACKICFESLPDLDNLLDHLIGKHDANYDKAIKTCLQPYRLIKDHMACPNCPDETFRFFGTLLKHVNKKHTDNNIICVYCGETFRRDQNLRVHIWRHHRDGRFRCNLCDAECNIPSRLYMHMAKAHGVKAAKCPKCPESFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHLVRHSGEKNFHCEVCGERFFWRKSLRTHIARNHKQLEAIHM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00836836;
90% Identity: -
80% Identity: -