Ibis020796.1
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- sip1
- Assembly
- GCA_958496205.1
- Location
- OY292402.1:19600617-19607231[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-15 5.7e-11 43.2 0.0 4 103 369 455 366 464 0.89 2 2 4.3e-20 1.3e-15 58.5 0.1 175 275 536 636 526 636 0.94
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAGGTTATTCGATTTGAAATTACTGACTACGATTTGGACAATGAATTCAATTTTAATAGGACTCACAAACAGAAGAAGGAACACCAGATCTATGGTGTATGGGCCAAAGACAGTGATGAAGAAGAAAATGAAGACAATATTAGGAAAAGAACTCGTAAGCCCAAGGATTTTTCAGCTCCTATTGGTTTTGTTGCCGGAGGCGTCCAGCAAGCTGGCAAGAAGAAAGAACAAAGTAAAGAAATAGAACAAAGCGAGGCATCAACATCCCGACCAAAGTTTGCGCCAGACAGTTCAGAGGATGATGAACCAGCCACAATAGATGAGAGTGAAACAGCTGGGATTAGGCGCAAAGGGCAGGGGATGAGGCAAGCCAACCTCGGAGGGAATGTTGGGACATGGGAGAAACATACTAAGGGTATAGGAGCTAAGCTGTTGTTACAGATGGGTTACCAGCCCGGTAAAGGTTTGGGGAAAACCTTGCAAGGTATATCGGCACCTGTAGAGGCCACAGTGAGGAAAGGTAGAGGTGCTATCGGTGCATATGGACCTGAAAAAGCAGCGCAAAAAGCTAAAAGAGAAGAGGAGAAACGTTTGAAAGAGAAAGAAGAAGCGGAGAAAGGTCCCGGCGAGAAGTCTTACAACTGGAAGAAGTCACACAAAGGCAGATATTTCTACAAAGATGCCGCCGATGTCATACAAGAAGGAAAACCTACATTACATACCATATCCACTAACGAGTTATCCCGCGTGCCCGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCtgcgcgccgccgcgccgcggtTCGAGCACGAGCCGCGCCGCCGCTGCGACCACTTCGCCATGCCCGAGCTGGCCCACAACCTGTCGCTGCTGGTCGACTGCTGCGAGCAGGATATAATCCAAAACGCTCGCGAACTGCAAACAGCGGAGGATACGATAGTGGTCCTAGAACGAGACCTGCAGGAATGTGACACCAAGTTAGAGGAACATGATGAGGTCATCAACAAAGTTGAGGACATATTGTCGAGGGTTCAAGAGCTGAACCGGCCAGATCTGTCCCTGGAGGCTGCTTATGATGTGCTTGCTGATTTGAAGGATACCCACCCACTAGAATACGAAATGTTCGGTCTTGGCACGATAGCTGGCAACATCGTCAGTCCGCTAATCAGCGCACTCCTGGCACCCTGGCAACCCTTAGAGACGCCCGAAGAACACATACCTACATTCTTGAAGTGGAAGACTTTGTTAACCGAGGACGCATACAACAGTCTTTTATGGCAACATTATGTTACGCATATTACTGAAGCTGCGCAatcacaGGTTGAAACCGCTACGGACACAGCTAGTTGCGATATAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCATCCGCCGTGTACCCGTCGATCCGGTCGCGGCTGGCGGAGGCGCTGGGCGCGTGGCACCCGGGCGACGCGTCGGCGCGGGGGCTGCTGGGCGCGTGGCGTGCCGCGTGGGGCTCCGCGCTGCTGCCTCTACTGCATCATCATATCCTGCCCAAGCTGGAGCACTGTCTCGTTCACGCGCCGCTGGAGCTTGTCGGGAGGGAGAACACGGCGTGGATGTGGTGCGTGGAGTGGGTAGAGCTGCTGGGCGCGCCGACTCTAGCCGCATTGGCTGCGCGCGCGCTACTGCCGCGCTGGCTGGCGGCGCTGGCGGCGTGGCTCAACACCAACCCCGCGCACGCCACCGTCCTCGCCTCGTACACTGACTTCAAGGTAAATATACTCTAG
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNFNRTHKQKKEHQIYGVWAKDSDEEENEDNIRKRTRKPKDFSAPIGFVAGGVQQAGKKKEQSKEIEQSEASTSRPKFAPDSSEDDEPATIDESETAGIRRKGQGMRQANLGGNVGTWEKHTKGIGAKLLLQMGYQPGKGLGKTLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKREEEKRLKEKEEAEKGPGEKSYNWKKSHKGRYFYKDAADVIQEGKPTLHTISTNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRRCDHFAMPELAHNLSLLVDCCEQDIIQNARELQTAEDTIVVLERDLQECDTKLEEHDEVINKVEDILSRVQELNRPDLSLEAAYDVLADLKDTHPLEYEMFGLGTIAGNIVSPLISALLAPWQPLETPEEHIPTFLKWKTLLTEDAYNSLLWQHYVTHITEAAQSQVETATDTASCDINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSAVYPSIRSRLAEALGAWHPGDASARGLLGAWRAAWGSALLPLLHHHILPKLEHCLVHAPLELVGRENTAWMWCVEWVELLGAPTLAALAARALLPRWLAALAAWLNTNPAHATVLASYTDFKVNIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837551; iTF_00834648; iTF_00836576;
- 90% Identity
- -
- 80% Identity
- -