Basic Information

Gene Symbol
kn
Assembly
GCA_958496205.1
Location
OY292400.1:21022741-21036909[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-142 2.2e-138 462.9 0.0 182 387 16 238 7 241 0.98
2 2 8.9e-05 0.67 8.9 5.5 421 515 248 352 240 387 0.70

Sequence Information

Coding Sequence
ATGTTACACCGTAAACCTCAACGTCGCATCCCATCAGGTGAAGTAAGATTTTTCCTCAAATTCTTCTTGAAGTGCaatcaaaattgtttaaaaaatgccGGCAATCCCCGAGACATGAGAAGATTTCAAGTGGTAATATCAACTCAAGTAATGGTGGACGGGCCTTTGTTAGCGATATCCGACAACATGTTCGTCCACAACAACAGCAAACACGGGAGGAGAGCGAAGAGGCTCGATCCAACTGAAGGTACCGACGCGACAGACAACCATTCGGGTCTTTACCCCCCTCTGCCAGTAGCAACTCCTTGCATAAAAGCGATATCTCCAAGCGAAGGATGGACCTCAGGGGGCTCCACTGTCATCATTGTAGGAGACAACTTCTTCGATGGACTTCAAGTTGTGTTCGGGACCATGCTGGTTTGGAGTGAgTTAATAACATCCCACGCGATCAGAGTTCAGACCCCGCCGCGGCATATACCGGGCGTCGTGGAAGTGACGCTCTCTTACAAGAGCAAACAGTTCTGCAAAGGAGCGCCAGGAAGATTTGTATACGTTTCAGCACTCAACGAGCCCACGATAGATTACGGGTTTCAGAGGCTCCAGAAACTTATACCGAGGCATCCTGGCGACCCGGAGAAATTACCCAAGGAAATCATCCTGAAACGAGCAGCGGACCTAGCTGAAGCCCTATACTCCATGCCTCGCAACAACCAGCTCGGGCTCGGCGGGCCTAGGTCTCCGCCCTCGAGCATGCCGTTCAACACCTATACTGGACAGCTGGCAGTCAGTGTGCAAGATACAGCTGCTTCCCAGTGGACTGAAGAAGAGTACGCGCGTGGCGGAGGCGGAGGCGGGACGGGGTCTGTTTCGCCGCGGTATTGCTCGGCGGCGAGCACTCCGCACGCACCCGCAGCGTACCCGCACCCGCAGCACTACCCCGCACCACCTACCTCGCTCTTCAACACCACCTCCCTGTCGCTAGGCCCATACCACCCTGCAAACGTGAATGGGCACATATCTGACCATCAGTATAACGCGTATAACTCGAAAGATACCTCATATAACACGAAAGATACAGCGTATTACACTGAAAGAAACGCAGATTCTAAGACCAGTGACTGCCCAGTAAACACTCATACAAAATTCACAACCGCTGATATGAAAGGGGAAGGAAATAAAGCGGGAATGGGCGGGCTGGTATCGTCGCCGTTCAGCGTAAATCCGTTCTCTTTGCCGACTTGCAGCGCTCAACAATACGCGCAGACAGCGCCCCTAACGTCTAAATAG
Protein Sequence
MLHRKPQRRIPSGEVRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDATDNHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSSMPFNTYTGQLAVSVQDTAASQWTEEEYARGGGGGGTGSVSPRYCSAASTPHAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANVNGHISDHQYNAYNSKDTSYNTKDTAYYTERNADSKTSDCPVNTHTKFTTADMKGEGNKAGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00834413;
80% Identity
-