Basic Information

Gene Symbol
kn
Assembly
GCA_907269075.1
Location
OU026092.1:5366568-5375995[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.2e-115 1.1e-110 371.3 0.0 218 387 2 188 1 192 0.99
2 2 3.3e-05 0.46 9.3 4.3 421 469 198 254 189 320 0.66

Sequence Information

Coding Sequence
ATGGTAGACGGACCTCTGCTAGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAACATGGACGGAGGGCGAAGAGGCTGGATCCCACTGAAGGTACCGACGCGACTGAAAACCATTCGGGCCTTTACCCTCCTCTACCAGTAGCAACTCCTTGCATAAAGGCGATATCTCCGAGCGAAGGTTGGACCTCAGGAGGTTCCACGGTCATCATTGTGGGGGACAACTTCTTCGATGGACTGCAAGTTGTGTTCGGGACCATGCTTGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTTCAAACCCCGCCGCGGCATATACCAGGTGTCGTGGAAGTGACGCTCTCCTACAAAAGTAAACAGTTCTGCAAAGGAGCGCCAGGAAGATTTGTATACGTTTCAGCACTCAACGAGCCCACGATAGATTACGGGTTTCAAAGGCTCCAGAAACTTATACCGAGACATCCTGGTGACCCGGAGAAATTACCAAAGGAAATAATCCTAAAACGAGCGGCGGACCTAGCTGAAGCCCTATACTCGATGCCCCGTAACAACCAGCTCGGTTTAGGAGCTCCTCGGTCTCCGCCCTCGAGTATGCCTTTCAACACGTATACCGGACAATTGGCAGTCAGTGTTCAAGATACTGCGGCTTCGCAGTGGACTGAAGAAGAGTACGCGCGCAGTGGCGCAGGAGGCGGTGGAACGGGGTCGGTGTCGCCGCGGTACTGCTCGGCTGCGAGCACGCCGCATGCGCCGGCTGCATACCCGCACCCGCAGCATTATCCTGCGCCACCAACCTCGCTCTTCAATACTACTTCCCTGTCGCTAGGCCCATACCACCCTGCAAACGTGAATGGACACTTATCTGACCATCACTATAACGCGTATAACGCGAAAGATACCGCATATAACACGAAAGATACAGCATATTACACTGAAAGAAACGCGGATTCTAAGAGCGGTGACTGTCCAGTAAACACTCATGCAAAATTCACAACCACTGATATGAAAGGGGATGAAAATAAAGCCGGAATGGGCGGTCTCGTATCGTCACCGTTCAGTGTAAATCCATTCTCTCTACCAACATGCAGCGCTCAGCAATATGCACAGACAGCGCCTCTAGCGTCTAAATAG
Protein Sequence
MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDATENHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNTYTGQLAVSVQDTAASQWTEEEYARSGAGGGGTGSVSPRYCSAASTPHAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANVNGHLSDHHYNAYNAKDTAYNTKDTAYYTERNADSKSGDCPVNTHAKFTTTDMKGDENKAGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00837255; iTF_00835337;
80% Identity
-