Iave003513.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- zfh1
- Assembly
- GCA_907269075.1
- Location
- OU026109.1:810009-813397[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2.2 1.8e+02 3.5 1.5 1 23 266 289 266 289 0.94 2 17 0.0049 0.39 11.9 5.8 1 23 294 317 294 317 0.97 3 17 0.00032 0.025 15.6 0.1 3 23 351 372 350 372 0.97 4 17 2 1.5e+02 3.7 1.5 2 23 439 461 438 461 0.90 5 17 5.8e-05 0.0046 17.9 1.8 1 23 467 490 467 490 0.95 6 17 3 2.4e+02 3.1 2.3 1 14 493 506 493 510 0.84 7 17 0.013 1 10.5 0.1 1 23 523 546 523 546 0.89 8 17 0.0047 0.37 12.0 0.2 1 23 551 574 551 574 0.95 9 17 0.008 0.63 11.2 0.4 2 23 587 608 586 608 0.96 10 17 0.00063 0.05 14.7 1.0 1 23 614 636 614 636 0.97 11 17 6.2 4.8e+02 2.1 0.1 3 9 643 649 642 654 0.91 12 17 0.00035 0.027 15.5 6.3 1 23 672 694 672 694 0.97 13 17 0.042 3.3 9.0 0.5 3 23 700 720 698 720 0.96 14 17 0.0064 0.5 11.5 2.1 1 23 747 770 747 770 0.96 15 17 0.0099 0.77 10.9 4.9 1 23 776 798 776 798 0.97 16 17 0.0011 0.089 13.9 6.1 2 23 805 826 804 826 0.96 17 17 0.018 1.4 10.1 2.4 1 23 832 855 832 855 0.96
Sequence Information
- Coding Sequence
- ATGTCAACCCAACACAACCTGAAACGCTACAAAAACATTCAATTCCTGAACAAGCAGTTGAAGACCTTACTCCTTGCACCTAAGTTCTGTTCCCTATGCCTGGAGAACGATGGAGAGTTCTACCCGTTGAGTAAGGAGTTGGCGATCAATGATGGTGGTGGGTCCAGGCCCTTGAGAGATGTTGTGGATACTATCTTCAATTTTCATATTGAAGATATAATGCCAAGTGGACTCATATGCGAAAAATGCACAGAAAAAATAATACATTGCTATACCTTTATAGAAAACACTAAGAAATTGTTCAAAGTTATTGAATATTGTGTCACTGACATAAACTCTAAGGTTTTGGACATAAGTAATGAGTTAGATGATAACAGAGAATATTCTGAAGCAAATGTTATGATCGTTGTAGAATATGATGCACAAACGTATAACGAAATTGATCAATTAACATCAGTTCAGAATGCTATATTTTCTGATGTACCATTGATATCAAAGATTACTGTAGAACACTTAGGACCCGTAATTGCTAATGTCAAATCTGATGTTACTGAAATGGATAAAATGAAAGTTGCGAAAGACACTCAAAAGGCTGTTGTAATTCCCACTCCGAGAGTAGTGAAACATCCTAGAGTATTGAGTAATCAAATTGTTATAAAGAAAGAAAATGTTGCAAACGTTAAAGAAGGAAAAGGAACTGATAAGGTTACGCCAAATGTATTACTAAAAGATGGTAAACTTCTAATAAAACCTTTACTTCTAAACAGTGCTCCGACAACACCGAAATTTAATACATATAATTGCTCCGCATGTTCTGACATATTTACCAGTTACAGAAAGTTAAAAGAACATGAAAAAAATAAACACAGTTCGGTTATTTATAAATGCAGACTTTGCGATAAGTGTTACAATACTCAGCAATATTTAGATATGCATTATAAATCGAAACATTTTAAGGAAAGATGCAGATTTTGCTCTGAACTTTTTAATACAGATGACGGATCATTAGATGCACATTTGAGTGAGAACCATAAAAACGCAGTATCAGCTTGTCCGTTCTGCAATCTAGTTTATTACAATTCTGATGAATTAGAAACGCATATAAAATCTTCGCATATATGTAACGATAATCTTATTACAAATAATAATAAAACTCAATGTATTATGTGTTTGAGAAGTTTTGTATATGATCAGTTGGATCATCATAAGTGCAAATTTGCTTGTCTAGATTGTCCCGTAGTTCAAGATAAATGCATTCATTATAACTACCTTATGTCTTATAGGGAACAAGTCCTCAATCATGCATCTACGATTAAATGTATCGATTGTGATTATACAACGAAAAGAAAAGAACTTTTGCTCTGTCATGTGAATAGAGAACACTTAGACCATCATCCATTTACGTGCAGCGATTGTGGCACACAATTCTATACGAAACAAAGCCTCAAAATACATATAACACAATTTCACCAAGAGTATAAATGCGAATTCTGTGATACAGATTTTAATAAAAACCCGAAATTCTATCGAAGTCACAGGGAAAGTTGCAAATTGGTGGCGAGGCAATACGCGTGCGTACAATGCGTAGCTTCCTTTGATACTAAAGAAGAATTAAATAGACATTCAGAACTGAATCATAGCGAATTCGTATACCCTTGCCCTCTGTGTAAGAAAGAATTTCCCGATGAAATATCTTTGGGAGAACATCACAGTAAAGTCCACAGCAGTGTCCAATTGAAAAAACGAAGAAAGTTAATTGAATGCACACTCTGCGATATTAACTTCAGAAACTTGAAAGAAATGTTCGAACATGAGAAATCTCACAATTCATCAGAGACATTCCCGTGCAAAGTTTGCCCGAAAATCTTTAAAACTCTAAAACAAGTTTACATACATAAACAGAGGCATTATTCAGAAAGGACCCTATGCCCCGGGTGTGGCAAATCAATCATAGTCTCCCGTTTCAAACATCATGAGGAAAACTGTCAATTTATAAAGAATAACGATTTAAAACATATTTGCGAGCATTGCGGGAAAGAGTTCCACTCGAATCAAACTTTGAAATTGCATCTAAGGAGTCATGTTAAACCTATAGCCTGTGACTATTGCACTAAAATGGTTAAGCCTGATTGTCTAGCAGCACATATTAGAAAGAAACATAGAGCTGTCGACAAATATAACCATCCAATAGACACCAAAATTCCAATACAAAAAAACGAAACGAAAGTCAAAGAATTCCACAACTGTGACAAATGTGAATATACAACAAAATCTCGCCTCTCTTTAGAGAACCACATCAATCGAGTCCATTTAAAAATTAAACCATTTAGTTGCGAGCATTGTGATAAAACATTTTGCGGGAAAATTAGACTGTTGGAACATTTCAAAATCCATTCCGAAAAAAACGTATGTTTTTGTTCGTATTGCGGTAAGAAATATGCTAACAAAGTATGCTTGAAAATGCATGTTAGGCGCCACACGGGGGAGTATCCATACCAATGCAACATTTGTTTTGAAAATTTCCGTTCCTCAAGCATTATGAAGACTCATAGACTAAAGAAACACCAAGATAAGACTATTGGTTGTCCACTGTGTGGTAATATGTTCCATTTAGCCACTGAAATGAGGTTTCATGTTAAAAAGGCGCATTGGAATAGAAACGAAGCTTTTGATTATAAGCAAATAGTGCCGGCGGAATATCATCATTTGTTTGAAGATCGTAGGCTTCAGAAATTGGGTGAAGACGATGGGATAGCGTTATAA
- Protein Sequence
- MSTQHNLKRYKNIQFLNKQLKTLLLAPKFCSLCLENDGEFYPLSKELAINDGGGSRPLRDVVDTIFNFHIEDIMPSGLICEKCTEKIIHCYTFIENTKKLFKVIEYCVTDINSKVLDISNELDDNREYSEANVMIVVEYDAQTYNEIDQLTSVQNAIFSDVPLISKITVEHLGPVIANVKSDVTEMDKMKVAKDTQKAVVIPTPRVVKHPRVLSNQIVIKKENVANVKEGKGTDKVTPNVLLKDGKLLIKPLLLNSAPTTPKFNTYNCSACSDIFTSYRKLKEHEKNKHSSVIYKCRLCDKCYNTQQYLDMHYKSKHFKERCRFCSELFNTDDGSLDAHLSENHKNAVSACPFCNLVYYNSDELETHIKSSHICNDNLITNNNKTQCIMCLRSFVYDQLDHHKCKFACLDCPVVQDKCIHYNYLMSYREQVLNHASTIKCIDCDYTTKRKELLLCHVNREHLDHHPFTCSDCGTQFYTKQSLKIHITQFHQEYKCEFCDTDFNKNPKFYRSHRESCKLVARQYACVQCVASFDTKEELNRHSELNHSEFVYPCPLCKKEFPDEISLGEHHSKVHSSVQLKKRRKLIECTLCDINFRNLKEMFEHEKSHNSSETFPCKVCPKIFKTLKQVYIHKQRHYSERTLCPGCGKSIIVSRFKHHEENCQFIKNNDLKHICEHCGKEFHSNQTLKLHLRSHVKPIACDYCTKMVKPDCLAAHIRKKHRAVDKYNHPIDTKIPIQKNETKVKEFHNCDKCEYTTKSRLSLENHINRVHLKIKPFSCEHCDKTFCGKIRLLEHFKIHSEKNVCFCSYCGKKYANKVCLKMHVRRHTGEYPYQCNICFENFRSSSIMKTHRLKKHQDKTIGCPLCGNMFHLATEMRFHVKKAHWNRNEAFDYKQIVPAEYHHLFEDRRLQKLGEDDGIAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837925;
- 90% Identity
- iTF_00837925;
- 80% Identity
- -