Iave020880.1
Basic Information
- Insect
- Idaea aversata
- Gene Symbol
- -
- Assembly
- GCA_907269075.1
- Location
- OU026093.1:1819293-1823695[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.29 23 6.3 0.1 1 23 16 38 16 38 0.95 2 17 0.0013 0.1 13.7 0.1 1 23 66 89 66 89 0.95 3 17 0.00012 0.0094 17.0 0.0 1 23 117 139 117 139 0.97 4 17 0.3 23 6.3 0.2 6 23 147 165 144 165 0.95 5 17 6.5e-05 0.0051 17.8 3.4 1 23 240 262 240 262 0.98 6 17 9.5e-06 0.00075 20.4 0.3 2 23 268 289 268 289 0.95 7 17 6.1e-06 0.00048 21.0 0.4 1 23 295 318 295 318 0.96 8 17 3.8e-06 0.00029 21.7 1.3 1 23 324 346 324 346 0.98 9 17 1.3e-06 0.0001 23.2 0.4 1 23 352 376 352 376 0.99 10 17 0.02 1.6 10.0 0.3 1 23 382 405 382 405 0.91 11 17 4.7e-06 0.00037 21.4 0.3 1 23 410 433 410 433 0.95 12 17 1.4e-06 0.00011 23.0 0.7 1 23 441 464 441 464 0.97 13 17 0.017 1.4 10.2 0.5 2 23 473 495 472 495 0.95 14 17 1.5e-05 0.0012 19.8 0.6 1 23 501 524 501 524 0.97 15 17 0.051 4 8.7 1.0 1 23 531 554 531 554 0.93 16 17 0.007 0.55 11.4 1.8 2 21 558 577 557 578 0.93 17 17 0.98 77 4.6 2.1 2 23 579 601 576 601 0.94
Sequence Information
- Coding Sequence
- ATGCAATCTGGCATCCCCTTAGTAAAGTTGGAGAGACTAAAACTGTTCAGCTGTGGAGAATGTGACAACGTGTACCATAATGAGATTGGACTGGCCGACCATGGCAAGTGGCATGATCTGCAGGAGTATCTAAACCGAGCTGGAGTGTTGGATCATTTTGAAAGTGCATTTGTAAAGTTACAACGAGTGAATATATTCCAATGTGGGGTTTGTCCTGTAGCATTCGTTAACCTTCGTCAATTTCAAGATCATCAGGCCAATGCACACAAGAAGCAGAAAACGAAGCAAAGCTCTCAAAAAAGTACAGCCGATGTTGACGACAGTAACAATAATGAAATAAATAAGCCTTACAAGTGTGGGGAGTGTGGATGGCGGTTCGTAGCGGAGTCAACTCTACTCGCTCACCAAGCACTCCACGAACCCATGCACACTTGCTCCTGTGGCATCGGCTACTACCGAGAACGAGACCTCATCTCCCATCGCAGGCTCGTACACCCCACTAAACTTACATGGAAACAGGAAACCAAATACAAAGGACCTAAGTTTTTACCAGAATTTGCTATCAAACCTGAACCTGAATCAGATTCAGACGCAAAATCAATGAAACCACGTCTAAAAGCTAGACTTGTTACAAAGAAAAAACCTAAATATAAGCTGAAGATAAAGATAGAAAATAAAAGGAATATGATAAACAAGGACAACATAAGTGGACCACCATACCAGTGTAAAGTATGCGATAAGTTCTTTAATAAATTTAGTACATATAAAACACACCAAATAATACATACAGATCAAGCTCCCAAGTGCTCTGATTGTGGAAAGATATTCGCAAGTAAGACGAATCTGGAAATACATAAGGTTGTTCACACTGGCGAGAGACCACATCCATGCGAAATATGTAACAAAAGTTTCACTCAAAGTGCTGCACTCTATATCCATGTCAAATCAGTCCATATAAATTCAAAAGAATATAAATGTAAAATATGTGAGAAGAGATTCAACCTCAAAGATCAATTGCAACGTCATGAACTGATACATAGTGCTTTGAAACCATACAAATGTCCATTTAAGTTATGTGAGAAAGGGTTTTCTGATCCGTCGGCTTTGGCACGCCATAAACGGACTCACACAGGCGACTGCCGATACGTGTGTCCGCACTGTCCCGCCGCGTTCACGGACATTAGCGCGCACGGGGCCCATATCAATAGGAAACACCTTAACAAACGATACTTGTGCAAAATTTGCGGGAAAACATTAGCAAACCCAAACAACCTCAATACACACAGACGAATACAGCATGGAATAGGCGAAGATAAATATTTCGAATGCGACTATTGTGGTAAAAGTTTCAACTTAAAGAATTATTTAGTCCGTCATATACAAATCAATCATGATAAACCCAAGGAGAAGCTCTGGGAATGTGATTTTTGCCCGAAAATGTTCTTACACCAATATAACCAAGGAGCCCACATGAGACTTGTACACTTCAAGAAGAATGCCTATGAGTGTGACTATTGTAACAGGATATTCACATATAAACCAACATTGATAAGTCACATAAAGTTAAACCATATCGGAACACCTATGAAATACCAGTGTGATTACTGTTACCGCAGATTACCTAAGAAAATAAGTATGTTGAAGCACATAGCCTTCCAACATCTGAACATTCAATGTTATAAGTGTAAACAGATGTTTTATACACCGATCGAGCTTAGGAAACACAAGTGCTCACAGTGTTTAGAGTGTAATGGATTGTTTGGTACGAAGATGAAACTGTCGGCTCATAAGAAAAGGTTGCATTCTGATAAAATTGTAATTTTCAATCCTGTGGAAAATTCTCCATCAGTAGTATCCTAG
- Protein Sequence
- MQSGIPLVKLERLKLFSCGECDNVYHNEIGLADHGKWHDLQEYLNRAGVLDHFESAFVKLQRVNIFQCGVCPVAFVNLRQFQDHQANAHKKQKTKQSSQKSTADVDDSNNNEINKPYKCGECGWRFVAESTLLAHQALHEPMHTCSCGIGYYRERDLISHRRLVHPTKLTWKQETKYKGPKFLPEFAIKPEPESDSDAKSMKPRLKARLVTKKKPKYKLKIKIENKRNMINKDNISGPPYQCKVCDKFFNKFSTYKTHQIIHTDQAPKCSDCGKIFASKTNLEIHKVVHTGERPHPCEICNKSFTQSAALYIHVKSVHINSKEYKCKICEKRFNLKDQLQRHELIHSALKPYKCPFKLCEKGFSDPSALARHKRTHTGDCRYVCPHCPAAFTDISAHGAHINRKHLNKRYLCKICGKTLANPNNLNTHRRIQHGIGEDKYFECDYCGKSFNLKNYLVRHIQINHDKPKEKLWECDFCPKMFLHQYNQGAHMRLVHFKKNAYECDYCNRIFTYKPTLISHIKLNHIGTPMKYQCDYCYRRLPKKISMLKHIAFQHLNIQCYKCKQMFYTPIELRKHKCSQCLECNGLFGTKMKLSAHKKRLHSDKIVIFNPVENSPSVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00837777;
- 90% Identity
- -
- 80% Identity
- -