Hcos036634.1
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020001052.1:7709-10180[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4.3e+04 -7.8 5.6 15 19 133 137 132 137 0.81 2 19 0.065 1.4e+03 0.7 0.4 4 10 168 174 167 174 0.96 3 19 3.1e-07 0.0067 17.7 15.9 3 19 185 201 184 201 0.95 4 19 2.1e-08 0.00046 21.4 13.9 1 18 236 253 236 254 0.93 5 19 1.1e-09 2.5e-05 25.4 13.6 1 19 289 307 289 307 0.99 6 19 1.2e-06 0.025 15.8 18.3 3 19 344 360 343 360 0.93 7 19 2 4.3e+04 -5.3 2.2 5 10 383 388 383 388 0.88 8 19 8.7e-07 0.019 16.2 18.2 1 18 394 411 394 412 0.97 9 19 1.4e-09 3e-05 25.1 10.7 1 19 421 439 421 439 0.99 10 19 0.0002 4.4 8.6 6.4 9 19 487 497 485 497 0.89 11 19 0.018 4e+02 2.4 5.0 1 12 507 517 507 517 0.89 12 19 0.31 6.7e+03 -1.5 3.5 14 18 546 550 546 551 0.87 13 19 0.13 2.8e+03 -0.3 0.4 7 12 566 571 566 571 0.86 14 19 3.7e-06 0.08 14.2 5.1 1 11 587 597 587 598 0.97 15 19 0.49 1e+04 -2.1 1.5 14 18 611 615 611 616 0.85 16 19 0.0061 1.3e+02 3.9 16.9 4 18 629 644 627 645 0.86 17 19 2 4.3e+04 -6.5 3.4 9 13 651 655 651 655 0.71 18 19 1.4 3e+04 -3.6 0.9 5 10 662 667 662 667 0.91 19 19 5.6e-05 1.2 10.4 11.5 1 16 686 700 686 706 0.91
Sequence Information
- Coding Sequence
- ATGGCTCGCCGATACAGAGATGCGGCCGCGAAACTGCAGCAGAATGTACAAAAACACTTACAAGATATGAAGGAACTTTCATCTTCGGAAGACGAGGAACCGTTTGAGTCGAGCGTGCTGGATGGAGTGTTCCAGAGTTACTGGAGAGGTGGCGGTGACACTCTTACGTTAAATCGGACCAAAAACTTGCTAGAAGAAGCAATAAGCGGTCGGCCTGCTACGTGTCTGATTTGTATAGGATCGATCAAGAGAGCAGATGCAATATGGACCTGTGAACACTGTCATTGTTACTTCCATTTATTATGCATACAAAAATGGGCAAACGATAGCATTAGTTTGAGAAATGTCGAATCCATGGGCGTTCGTGTGTTTGTACCTGAGAAAGTTGAATGGTGTTGCCCGAAATGCCGGCACTCGTATAGCAAAGTCGAAATACCGCGGAAGTATAGATGTTTCTGTGGAAAAACTGATAATCCTCCGCACCATCCATGGCTGATACCTCATTCTTGTGGAGAGGTGTGTGAGAAACGTCTCTCTTTAGGAGATAATTGTAAACATAAGTGTTTGTTGTTATGCCATCCTGGTCCGTGTCCACCCTGTCCACAGACCGTGAACGGAGTGTGTTACTGTGAGAAAGAACGGAAAAAAGTTAGATGTAGTGCCGCTAAATGGTCTTGCGGACAGCAGTGTAAGAAAACACTTATATGTAACTCGCACAAGTGTGAGAATGTTTGCCACCAAGGAGATTGCCCACCGTGCGAGTATACAAGTGAGCAGCCATGTCAATGCGGAACCAAGAAGGTTAAGAGACCATGTAATGATCCTTTTTGGCAGTGTACTAAATCATGTAACAAACCTTTTTCATGTGGTTATCACAAATGTGAGCAAATATGTCATTCTGGATCATGTGGCACCTGCCCCAATTCAGGCCTACGATCTTGTCCTTGCGGAGCAAATGAACGCTATGTACAATGCCCGGATGTTATGGAATCATGCCTTGGAACCTGTAATAAAAAGCATGAAGATTGTGAACACAATTGCCCTGAGAAATGTCACAAGGGCCCATGCCCACCATGCCAAGTACTCATACAAAAGAGATGCCAGTGTTCTGCACATACCCGTTCACTACCATGCAGTAAGGATTTCAAGTGCGAGACAAAATGTCGTGGCACACGCCCTTGTGGGAAACACAGTTGTACTAAAAAGTGCTGCAATGGTAATTGCCCTCCTTGTGAGAAAGTATGTGATAAACCACTGCAGTGTGGTCGACATAAATGCACTATGGTTTGCCACCGTGGTCTATGCTATCCTTGCCCGAGAGAAACAAAAATAACTTGTAGATGCAAAGAAACTTACATCACCGTCCCATGTGGAAGAGAAAAATACACAAAGCCACCTAAATGCAGTTTAGCTTGcagaattaaatataaatgtggCCATATTGAAGAGAACAAGCATTCCTGCCACTTCGGTGACTGTCCTCCTTGCAAAGCAGTATGTAACAAGAATTATGAGAAATGTAGCCACATATGTAAAGCGATATGTCACGAATTTGTCGCTGTTGTCTTTAAACAAGTGGAAAAACCAGCGACTCCATGGGAAATAACACCTccgaaaacaaaaataatgaatttagACTGTCCGCCTTGTGAAACACCGGTCCCAGTCATTTGTTTTGGTGAACATGAAACGGAACAACAGCCGTGTCATTCAGCAAAACGAAGATGTTGTGGGCGGAATTGTGACAAGCCTTTAGCTTGTGGTAACCATACTTGTAATTTGCTCTGTCATCTATATTCTCCTACTCCTGACTACCCAAGCGTGCCTTACAATTGCAAACCGTGTGATAGAGAATGTATGAAGTCCCGTCCAGAGAAATGTACGCATAAATGCTCTATAAGGCAGTGTCACCCAGGACATTGTCCTCCATGTGACACATTTGAGCGGATCCCATGTCACTGTGGAGTAACTGAACTGTATCTACGTTGCCGTGAACTTTGCACTGCGAACGAAGAATTATTGTCTTGTAAACAGCAATGTCCGAAGAATTTATTCTGTGGGCACCGTTGTCGAAACAACTGTCATTCCGGTGCTTGCGGACTAGGGCAAATTTGTACAAAGAAGACCAAGGTACACTGCCCATGTGGAAAcctgaaaaaagattttccatGCAACGTCGTAAGAAATGGTGAAGCGAAACTGCTTTGTGATGAAAGTTGtgaagaaaagaaaattgcAGCCAAGTTAGAAAGTGATAGAGAAAGACAGAGACAGAAAGAGTTGGAAGAAGAGAGGAACCGTAAAGAGTTAGCGGAGTACGAATGGAAACTTAGTGGTAAGAAGAAGAAATACAAGGAAAAGAAGGTTGTTGTGAATGTTGACAATAGAAACTGGGTTAGGAAGTATTGGATCCCGATTCTGTCCATTTTAACTACTGGTATAGCAGCTGTTTATTGTGTTTTATATGGGTGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQDMKELSSSEDEEPFESSVLDGVFQSYWRGGGDTLTLNRTKNLLEEAISGRPATCLICIGSIKRADAIWTCEHCHCYFHLLCIQKWANDSISLRNVESMGVRVFVPEKVEWCCPKCRHSYSKVEIPRKYRCFCGKTDNPPHHPWLIPHSCGEVCEKRLSLGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKKVRCSAAKWSCGQQCKKTLICNSHKCENVCHQGDCPPCEYTSEQPCQCGTKKVKRPCNDPFWQCTKSCNKPFSCGYHKCEQICHSGSCGTCPNSGLRSCPCGANERYVQCPDVMESCLGTCNKKHEDCEHNCPEKCHKGPCPPCQVLIQKRCQCSAHTRSLPCSKDFKCETKCRGTRPCGKHSCTKKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHRGLCYPCPRETKITCRCKETYITVPCGREKYTKPPKCSLACRIKYKCGHIEENKHSCHFGDCPPCKAVCNKNYEKCSHICKAICHEFVAVVFKQVEKPATPWEITPPKTKIMNLDCPPCETPVPVICFGEHETEQQPCHSAKRRCCGRNCDKPLACGNHTCNLLCHLYSPTPDYPSVPYNCKPCDRECMKSRPEKCTHKCSIRQCHPGHCPPCDTFERIPCHCGVTELYLRCRELCTANEELLSCKQQCPKNLFCGHRCRNNCHSGACGLGQICTKKTKVHCPCGNLKKDFPCNVVRNGEAKLLCDESCEEKKIAAKLESDRERQRQKELEEERNRKELAEYEWKLSGKKKKYKEKKVVVNVDNRNWVRKYWIPILSILTTGIAAVYCVLYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737154;
- 90% Identity
- iTF_00833723;
- 80% Identity
- iTF_00833723;