Basic Information

Insect: Hypsopygia costalis
Gene Symbol: -
Assembly: GCA_937001695.2
Location: CAKZJU020000030.1:721427-734567[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.7 2.8e+02 3.5 0.3 1 23 54 77 54 77 0.95

2 20 0.045 4.6 9.1 3.0 1 23 84 107 84 107 0.97

3 20 7.4 7.5e+02 2.1 4.8 1 23 188 210 188 210 0.97

4 20 0.0015 0.15 13.8 0.7 2 23 216 237 215 237 0.97

5 20 3.2 3.3e+02 3.3 1.5 1 23 243 265 243 266 0.94

6 20 0.53 55 5.7 4.4 2 22 511 531 510 531 0.95

7 20 4.4 4.5e+02 2.8 1.0 1 23 629 651 629 651 0.82

8 20 0.76 78 5.2 0.3 2 23 783 804 782 804 0.96

9 20 0.059 6 8.7 0.4 2 23 878 899 877 899 0.96

10 20 0.2 20 7.1 0.5 1 23 907 929 907 929 0.97

11 20 0.2 20 7.1 3.2 1 23 966 988 966 988 0.95

12 20 0.00084 0.086 14.5 4.6 1 23 996 1018 996 1018 0.99

13 20 0.13 14 7.6 1.9 1 23 1103 1125 1103 1125 0.99

14 20 1.5 1.6e+02 4.3 2.3 1 19 1179 1197 1179 1201 0.93

15 20 0.13 13 7.6 0.2 3 23 1297 1317 1295 1317 0.94

16 20 0.018 1.9 10.3 1.1 1 23 1323 1345 1323 1345 0.96

17 20 0.0086 0.88 11.4 2.6 1 23 1435 1457 1435 1457 0.97

18 20 0.00022 0.022 16.4 1.4 1 23 1463 1485 1463 1485 0.99

19 20 0.4 41 6.1 2.1 1 23 1576 1598 1576 1598 0.96

20 20 0.0036 0.37 12.6 3.7 1 23 1609 1631 1609 1631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.7	2.8e+02	3.5	0.3	1	23	54	77	54	77	0.95
2	20	0.045	4.6	9.1	3.0	1	23	84	107	84	107	0.97
3	20	7.4	7.5e+02	2.1	4.8	1	23	188	210	188	210	0.97
4	20	0.0015	0.15	13.8	0.7	2	23	216	237	215	237	0.97
5	20	3.2	3.3e+02	3.3	1.5	1	23	243	265	243	266	0.94
6	20	0.53	55	5.7	4.4	2	22	511	531	510	531	0.95
7	20	4.4	4.5e+02	2.8	1.0	1	23	629	651	629	651	0.82
8	20	0.76	78	5.2	0.3	2	23	783	804	782	804	0.96
9	20	0.059	6	8.7	0.4	2	23	878	899	877	899	0.96
10	20	0.2	20	7.1	0.5	1	23	907	929	907	929	0.97
11	20	0.2	20	7.1	3.2	1	23	966	988	966	988	0.95
12	20	0.00084	0.086	14.5	4.6	1	23	996	1018	996	1018	0.99
13	20	0.13	14	7.6	1.9	1	23	1103	1125	1103	1125	0.99
14	20	1.5	1.6e+02	4.3	2.3	1	19	1179	1197	1179	1201	0.93
15	20	0.13	13	7.6	0.2	3	23	1297	1317	1295	1317	0.94
16	20	0.018	1.9	10.3	1.1	1	23	1323	1345	1323	1345	0.96
17	20	0.0086	0.88	11.4	2.6	1	23	1435	1457	1435	1457	0.97
18	20	0.00022	0.022	16.4	1.4	1	23	1463	1485	1463	1485	0.99
19	20	0.4	41	6.1	2.1	1	23	1576	1598	1576	1598	0.96
20	20	0.0036	0.37	12.6	3.7	1	23	1609	1631	1609	1631	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCCGCCGTGCGCACAACTCGGCGAGGTTGCGTTTGTCGTGCGCCCGTTTGAAGGTCGCTTCAACGGCGACGTTTCGTCGGAGGCCTCCTCGGACGCCACTGAAGAATCGGAATTACCACAGTGCAAGATAAAGCGGAATTACAATTGTTCAAAGTGCGCGTTCTACACACAAAATCCGCGTGCTTTTCTTGTACATATTAGAGAAGTACATTTCGAGAAATTCAAAATATACGACTGTCCATACTGTGTCTACGCTTCCAGGCATCACCAAAAACTTTTGAGGCACTTAAAAATGGTACATGGAAATCAAAGTTCTGCATCCAACATCAAAATGGAATCTGAATTACCATCTTCTGCTACGGAACATGTAGAAGCACAGGAACGAATGGAAGACCTTCTCGAAGAAGTCGAGGAATGTGAAGATGTTGATATGGATGTAGAAGACTGTAACATAGAATCTTACTATCGCCCAGGCGATGACATAGATGGAGATAGGTCTACGATGGATGACATGAGCCAGTCGAAAACCAAAAGTGATTTTTTCTCCTGTGAAAAATGCAGCTATGTGACACACATAAAATCAAGATATACGAAGCACGTTAAATATCACTCTATTCCCAGGATTAAATGTACGATATGTGAGTTTCGTACGCCGTACAAATGGAATTTGGATCGACACATGAGAAACCACGGCGGCAGCGGAAGCTTCAGCTGTTATATGTGCAACTTTACTGCTGACATCAAGCAAAGTTTGACGGCACACGAAATGAATCATCACACCCGACCCATGGGCCAATCGCCGCCGAGTCGCGGCCGCAACCGGGTGGGCGCCGGCAATGTGTTACTCACCAGAAGCACTCCGACCACGCTCGTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCACACTCGGCCTCGGACATGGGATTACAATTCGCAGAAAAAGAAATGATCACCTGTAATAGTGATTCTAACGAAGCAACTGCTTCCGAATTTATGCAGAAGGAAAATTCGCATTTTGCTCAAGATGGACAAAGTCAGCATTCACCGAATGGTACCTCAGACGATGCGCATTATAATAAACAGAGCAGAAAAATACCTCGACCAATACCACAACTCATACCTTTAAATGCTTCGACACCAAACCAAAAAATGTCGCCTGGAGAACCACcatcaaaaaaaattaaagagaaCCCAACCGAGTCTATGGATTCAAATTCggacaataaatatgaaacgtTACCAGCGGACATTACTATGATACCTTTAAACAATTTACCCACAAACACGAAAGAAAATGTGATACGCAAGAAAAATGAATCATTCTTCGATAAACTGAAAGAAAGATTACTTACAGAAACAGGTGAAGAAGGATCTCTTAAATGCAAAAACTGTGGTTTTGAAAGCAAATGCCTTTCAGAACATTCTGTGCACGAGAAAACTTGCACAATACAATCTAATCGCAGTGCGTCTAATTCATTGCTCCCCAGTTCGAGCTCAACACGATGTCAAAATTGTAGACATCGATGTAAATCTAGCGCAGATTTGCATATTCACATGCTAACATGTCGAAAAAGCGACAAAAAAGATGAACACTTCGTGGAAACTAAAAACCAAGACAGTGACGATGCAACTACGTCCAACCAAGAAAGTAACGTGGAGCCTCATCCAATGGAAAATGTCGTCTTCGTTTGGAATAACATAAACCACAATGCAAATAAGTTTGATACTCCGCTTGGTATAAATATCAATGACGATTCTACTCTTCCAGACCGAAATAGACATTATGACAATGAAATAGTTGACGACAATGAAAGCATGAATCTATCGCCAAGCCAAGCTGTAGGAAAAAGAGTTTTTAAATGCCCACACTGTCCATTTTGGGCATCGACGGCTTCTAGATTCCATGTTCATATCGTGGGGCATTTAAATAAGAAACCGTTTGAATGTTCGCTATGCAAATATAAATCTAATTGGCGATGGGATATAACTAAGCATATAAAGCTAAAGTCTGCAAGGGACCCGGAACATAACGACGCTAAAGTGCTTATGACCGATGAAACCGGCAGAAGGAATTATACTAAATACAGTAAATTTTTAGCCATGCCTGTATTAAATGAATATGGCGAAAATGAGTTTCACTATATAGACCAAAACGCATCCGTTGATCCATCGATTGTTCTCAATGACATGAACGAACATATGAGTGCACCGTACGAAATGCAACCGTTAAACTTGCAGACACTACATGGGGACCAAAAGTATGATTCAATGGACAATAGAACATCCGATGGcaagaaaattaagaaaaccTTATGGAAATGCAAGAAGTGCAATTACAAGGACCCATCAAAAGAGGCGCTGTTGGAGCATGTCCGGGAGCACGCAAGAGCTGAGGGCACCCTGGGCGGCCAAGCATTAAAGAAACCCGATAATTTACCAGACCCTGCAGATTTAGCGTACCGGTGTGGACATTGCAATCAATTATCCAACTGGAAACATGTTATACAGaGACACTGTCGCTTAAAGCATGATGGAGTAATAAAGGTTATCACTACAGTAAAGCCGAAGCCCGAAAATTCTTCGAATGAACTCAACAATGATACATGTACGAAATGCCCATTTAGAGCGACAGATAAAAATATGCTATTGGCGCATCTACAACAACACCAGCCTATGCCgaattgtatatataaatgctACTTTTGTCCTTACTTTGTGAAGGAAGAACAAGAGCTAATTCAACATTTATTACTACACGGCGTTACTGAACCAGAGGAATACATCGGCAAAACATTGGAATGTAGATCTCCGATACCTGATCCGCAAGGATCCACAACAACGTCAAACCCATCCTCAACCAAGCGACATAGATGTACTGAATGTCCATATGAAACAAACAGCAAATCACAATATATGTATCACGAGCAGTTCCACCGCCTTCCAGCAGACACTCCCTATAAATGTCCGCAGTGTAACTATAGCGTGTCTAAAAGACATTTGTTGCATCAGCATTTGCGAGTTCACGGAATTATAACAAAGAAGAACGAATCTGAAGCAGAGTTAGAAGCTATGGTATCGAATCCCGGCAAGTCGGATTCCAAAATTGATATTTCGATGAATCTTGACGAAATCCCATATGTTTGGGTATCAGCAAAAAACGAATTTCACAAAATGTACAAATGTCGTTACTGCTCATACGTTAATtcacaaaaatgtaaaattccTAATCATGAAAAAATCCATTGTATCATTTTTGAAAATACTGAAATAACTGTATACAAATGTTTGGAATGTAAATTTACATGTGATAATGCAGGAAGAttggcagagcattccaaaaCGCACGGTGAAATCTATGGCCGTATTTATTGCCCTGTAGAACCTGAAATACCGGATGAAGAACAGATTGCCAAATTGCGCAAAGTAATAGAAGTTGAAAAAACCACAGAAGGACTTCCCAAAGGGGAAGGTTCAAATAGTGAAAATAAAGAAGtaaaagttctatatttttgccAAAAATGTCCATCCCGATTTTTCACAGATAGTGAATTGAAAATACACGACAAATTTCATGATCTAACATTCCCTAACAAGTGTAAAAGTTGCGAATTTTCAGTACCTGAAGAAAATGAGTTGATTTCGCACGTTGTTGTTCATACAGACGAGTATAACACAAAAACTAAAATGCTGAAATTCGTTCATAACTGTCACATAGCACATACACAACCTCGTTTAGAATTAATTCACTGTCCGAATACATCAGATATTACTTGGGTAGTTTCAAGTCCATCAAAGAATTTCGACAGTGAAAGTAGCTTTAAAAAGAATGATTCTAAACACGTACCCAAACAATATGGTTGTAAAGAATGCCCGGCGAAATTCTTTAAAAGCTCTGCACTTGGTTATCACATGGGACTACATGGAAGCGATGGTGAACACAAATGCAAAAAGTGTACTTATGCCGTCAAAAATATTGGAAACTTAGCAAAACATGAATTGTTACATGAAGCTGAAAATAAAGCTGCAAACTGTGACTATGAATCCGGTGACGATatggattataaaaatataccacTATCTGGCacagatttgtttcagagaaAGACTGAAGCTCAGAAACGAGTCTTAACTGATAAGGATAAATTAGTGAAACCTAATGATCATTTTCCGCCAGTTCTTCAGGCTGATCCACAATTTGGATACTTGATGCATGGTAACCCAGAATTCATATACCCCACTTACCTAAAAAATGGTCGGCAAAAGGAAAAACGTTACAAATGCCACAAATGCCCCTCAGCGTTTGAAAAAAGAGAACAGTATAAAATACATTTGTCCTTACACGGTTCAAAGCAAAGGTACAAATGTGAGCTTTGCGATTATTCAGTTAAATATTACGCGAACTATGTCCAACATATGAGAAAACACCAGATGAATGACGAAGCTCAAgctgaaagaaaaaaaggtaacaatggcTTCACCGAATCCGAGACACCTGAGAATAAGCCGGATGATAGCGGCGATAATATAAAACTAGCCATTAAAACAATGCCAAAAGGGGCAATTAAAAGTGATTTCCAACAATTCTCGATAAGTGATCAACAAACTTTACGGTTACTCCAGCGAAGACGGTCTATAAATAGTTCTGGAATGGATCCAACACCAAATGAAACAACGCCAACTAAAGACCGCAAACAACACATGTGTCTGCTGTGCCCTTACACGAATCAGAGACAAGATGCTTTAACAAACCATTACAGAAGACACGACGACACCGACATTCTTAATGCAGGAAATCACAAATGTTCTTATTGTGACTTAGTTGTAGTTCAATCACATTTCCTTCGGGAACATTTAAAAACTCATTTTAACTACCAGAAGACTCTAACTCCTGAATGTTTTGTGGCTAATGAAAATGTGAGTTTTACTATCACTAAAGTAGACGACGAAACTGTAACTACCGATCTCAAATTAGATATACGAAACAAGGGTCACGCATGTAACGAAGACAAGATTTTTGTGAGTATCAAAACTGGGGAGCTCTTGGTAGAATAA
Protein Sequence: MLQQMSSPPCAQLGEVAFVVRPFEGRFNGDVSSEASSDATEESELPQCKIKRNYNCSKCAFYTQNPRAFLVHIREVHFEKFKIYDCPYCVYASRHHQKLLRHLKMVHGNQSSASNIKMESELPSSATEHVEAQERMEDLLEEVEECEDVDMDVEDCNIESYYRPGDDIDGDRSTMDDMSQSKTKSDFFSCEKCSYVTHIKSRYTKHVKYHSIPRIKCTICEFRTPYKWNLDRHMRNHGGSGSFSCYMCNFTADIKQSLTAHEMNHHTRPMGQSPPSRGRNRVGAGNVLLTRSTPTTLVPKEEEGSGDSRSSHSASDMGLQFAEKEMITCNSDSNEATASEFMQKENSHFAQDGQSQHSPNGTSDDAHYNKQSRKIPRPIPQLIPLNASTPNQKMSPGEPPSKKIKENPTESMDSNSDNKYETLPADITMIPLNNLPTNTKENVIRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKTCTIQSNRSASNSLLPSSSSTRCQNCRHRCKSSADLHIHMLTCRKSDKKDEHFVETKNQDSDDATTSNQESNVEPHPMENVVFVWNNINHNANKFDTPLGININDDSTLPDRNRHYDNEIVDDNESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYTKYSKFLAMPVLNEYGENEFHYIDQNASVDPSIVLNDMNEHMSAPYEMQPLNLQTLHGDQKYDSMDNRTSDGKKIKKTLWKCKKCNYKDPSKEALLEHVREHARAEGTLGGQALKKPDNLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPENSSNELNNDTCTKCPFRATDKNMLLAHLQQHQPMPNCIYKCYFCPYFVKEEQELIQHLLLHGVTEPEEYIGKTLECRSPIPDPQGSTTTSNPSSTKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCPQCNYSVSKRHLLHQHLRVHGIITKKNESEAELEAMVSNPGKSDSKIDISMNLDEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENTEITVYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEPEIPDEEQIAKLRKVIEVEKTTEGLPKGEGSNSENKEVKVLYFCQKCPSRFFTDSELKIHDKFHDLTFPNKCKSCEFSVPEENELISHVVVHTDEYNTKTKMLKFVHNCHIAHTQPRLELIHCPNTSDITWVVSSPSKNFDSESSFKKNDSKHVPKQYGCKECPAKFFKSSALGYHMGLHGSDGEHKCKKCTYAVKNIGNLAKHELLHEAENKAANCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNGFTESETPENKPDDSGDNIKLAIKTMPKGAIKSDFQQFSISDQQTLRLLQRRRSINSSGMDPTPNETTPTKDRKQHMCLLCPYTNQRQDALTNHYRRHDDTDILNAGNHKCSYCDLVVVQSHFLREHLKTHFNYQKTLTPECFVANENVSFTITKVDDETVTTDLKLDIRNKGHACNEDKIFVSIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00648710;
90% Identity: -
80% Identity: -