Basic Information

Insect: Endotricha flammealis
Gene Symbol: -
Assembly: GCA_905163395.1
Location: LR990856.1:5956422-5963446[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.76 65 5.2 0.7 1 23 54 77 54 77 0.95

2 20 0.1 8.5 7.9 2.8 1 23 84 107 84 107 0.97

3 20 6.9 5.8e+02 2.2 4.8 1 23 176 198 176 198 0.97

4 20 0.0014 0.12 13.8 0.7 2 23 204 225 203 225 0.97

5 20 3 2.5e+02 3.3 1.5 1 23 231 253 231 254 0.94

6 20 0.22 18 6.9 4.9 2 22 479 499 478 499 0.95

7 20 4.1 3.5e+02 2.9 1.0 1 23 597 619 597 619 0.82

8 20 0.71 60 5.3 0.3 2 23 751 772 750 772 0.96

9 20 0.48 40 5.8 0.5 1 23 876 898 876 898 0.97

10 20 0.14 12 7.5 3.4 1 23 935 957 935 957 0.95

11 20 0.00029 0.024 15.9 4.0 1 23 965 987 965 987 0.99

12 20 0.13 11 7.6 1.8 1 23 1072 1094 1072 1094 0.99

13 20 0.26 22 6.7 0.9 1 19 1150 1168 1150 1168 0.97

14 20 0.25 21 6.7 0.1 2 23 1179 1200 1178 1200 0.97

15 20 0.0037 0.31 12.4 0.8 1 23 1266 1288 1266 1288 0.95

16 20 0.017 1.4 10.4 1.1 1 23 1294 1316 1294 1316 0.96

17 20 0.008 0.68 11.4 2.6 1 23 1406 1428 1406 1428 0.97

18 20 0.0002 0.017 16.4 1.4 1 23 1434 1456 1434 1456 0.99

19 20 0.37 31 6.2 2.1 1 23 1547 1569 1547 1569 0.96

20 20 0.012 0.99 10.9 5.6 1 23 1580 1602 1580 1602 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.76	65	5.2	0.7	1	23	54	77	54	77	0.95
2	20	0.1	8.5	7.9	2.8	1	23	84	107	84	107	0.97
3	20	6.9	5.8e+02	2.2	4.8	1	23	176	198	176	198	0.97
4	20	0.0014	0.12	13.8	0.7	2	23	204	225	203	225	0.97
5	20	3	2.5e+02	3.3	1.5	1	23	231	253	231	254	0.94
6	20	0.22	18	6.9	4.9	2	22	479	499	478	499	0.95
7	20	4.1	3.5e+02	2.9	1.0	1	23	597	619	597	619	0.82
8	20	0.71	60	5.3	0.3	2	23	751	772	750	772	0.96
9	20	0.48	40	5.8	0.5	1	23	876	898	876	898	0.97
10	20	0.14	12	7.5	3.4	1	23	935	957	935	957	0.95
11	20	0.00029	0.024	15.9	4.0	1	23	965	987	965	987	0.99
12	20	0.13	11	7.6	1.8	1	23	1072	1094	1072	1094	0.99
13	20	0.26	22	6.7	0.9	1	19	1150	1168	1150	1168	0.97
14	20	0.25	21	6.7	0.1	2	23	1179	1200	1178	1200	0.97
15	20	0.0037	0.31	12.4	0.8	1	23	1266	1288	1266	1288	0.95
16	20	0.017	1.4	10.4	1.1	1	23	1294	1316	1294	1316	0.96
17	20	0.008	0.68	11.4	2.6	1	23	1406	1428	1406	1428	0.97
18	20	0.0002	0.017	16.4	1.4	1	23	1434	1456	1434	1456	0.99
19	20	0.37	31	6.2	2.1	1	23	1547	1569	1547	1569	0.96
20	20	0.012	0.99	10.9	5.6	1	23	1580	1602	1580	1602	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCCGCCGTGCGCACAACTCGGCGAGGTCGCGTTTGTCGTGCGCCCATTCGAAGGTCGCCTCCACGGCGACGCTTCGTCAGAAGCCTCCTCGGACGCTGCTGAAGAGACGGAATTACCGCAGTGCAAAATAAGGCGGAATTACAATTGCACTAAGTGCACGTTCTACACGCAAAATCCGCGTGCATTTCTTGTACACATTCGAGACGTACATTTGGAAAGATTTAAAATTTATGATTGTCCAAACTGTGTTTACGCATCGCGACATCACCAAAAACTTTTAAGACATTTAAAAATGGTGCATGGCAATCAAGGGTTGACATCGAACATCAAAATGGAATCCGAACCATCTGTTTCGGAAACGGCAGAGCCACAGGAGAGAATGGAAGACCTACTTGAAGAAGTTGAAGAATGCGAAGATGTCGATATGGACGGTGAAGATAACATGGACTCGTACTACCGTTCTGGTGACGGTGATGACGGCCAATCAAAACAAAAGGGTGACTTTTTCTCGTGTGAAAAATGCAGTTACGTGACGCACATAAAATCTAGATATACTAAACACGTTAAATATCATTCAATACCCAGAATTAAGTGTACCATTTGTGAGTTTCGCACGCCGTACAAGTGGAATCTTGATAGACACATGAGAAATCATGGTGGCAGCGGCAGTTTCAGCTGCTACATGTGCAACTTCACTGCTGACATCAAGCAAAGCCTGACAGCGCACGAAATGAATCATCACTCTCGACCTATGGGCCAATCGGTGGTGAGCCGCGGCCGCAACCAGTTGGGCGCCGGCAACATGTTCACGAGCAGCGCGCCGACCACGCTCATCTCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCGCACTCGGCCTCGGATATGGGGTTACAGTTTGCGGAAAGGGAAATGATTACCTGCAACAGTGACTCAAACGATGCAGCAGTTCCGGCAGCAGACTTACAGAGTCCCCTTTCACCCAATACAGATGGTAAACAGAGCAGAAAAATTCCTCGTCCCATACCACAACTCATACCTTTGAATGCGTCTACACCTAATCAAAAAATGTCACCTGGAGAACCGCCAGCAAAAAAATTCAAAGATGATAACACCGATTCCAATTCAGATAATAAATTTGAAACGTTACCACCTGATATTGTTATGATACCTGTAAGCAGTACTCCAACAAACTCAAAAGAAAATGTAGTACGCAAGAAAAATGAATCATTTTTTGATAAATTAAAGGAAAGATTACTGACAGAAACAGGAAAAGAAGGATCACTCATATGCAAAAACTGCGGCTTTGAAAGCAAATGTCTCTCTGAACATTCTGTACACGAGAAAACTTGTAACGTGCAATCAAACCGTAGTGCGACGAACTCATTGCTTCCAAGTTTAAGTTCCACAAGATGTCAACATTGTAGACATAGATGCAAATCTAGTGCAGATTTATATATTCATATGCAGACATGTCGGAAAAACGAAAAAAGAGATGAACAGTCTGTGGAAGCTAAAAATCAAGACGGCGACGAGGCAACAACATCGAACCAAGAAAAAGAGATGGAGCCGCATCCAATGGAAAACGTAGTGTTCGTTTGGAATAACATAAACCACGATGCAGATAAATTTGATACGCCACTTGGTATAAACATCAATGATGATTCTACTCTACCAGACAGAATTAGACATTTTGACAACGAAATAACGGATGAAAATGAGAGCATGAATTTATCTCCAAGTCAAGCTGTAGGAAAGCGAGTTTTTAAATGTCCACATTGTCCCTTCTGGGCTTCCACGGCCTCTAGATTCCATGTGCATATCGTGGGTCACTTGAATAAAAAACCATTCGAATGTTCGCTATGCAAATACAAATCTAATTGGCGATGGGATATAACTAAACATATAAAGTTGAAGTCTGCACGGGATCCAGAACATAATGAGGCTAAAGTTCTCATGACTGATGAAACTGGCCGAAGAAACTATACTAAATATAGCAAATTCCTTGCTATGCCAGTTTTAAATGAATATGGTGAGAATGAATTCCACTATGTAGATCAAAACGCCTCATCAGATCCCTCTATAGTTTTCAATGATGTGAATGACCACACGGGTGTACCCTATGAAATGCAACCGCTCAATTTACAGACACAGTTTGGTGACCAAAAGTATGAATCATTGGAGAATGCACTTTCTGATGGCAAGAAAATAAAGAAAACTTTATGGAAATGTAAGAAGTGCAATTATAAGGACCCTTCTAAAGAAGCTCTATTGGAGCATGTCCGAGAACATGCCAGGGCTGAAGGAGGCATTTTTGGCGGTCAGGGTCTAAAGAAACCTGAAAATCTTCCAGACCCCGCCGATTTAGCATATCGTTGTGGACATTGTAATCAACTATCCAACTGGAAACATGTTATACAGAGACATTGTCGCTTAAAGCATGACGGAGTTATAAAGGTCATCACCACTGTAAAACCTAAACCTGAAAATTCATCGAACGAACTCACCAGTGACACTTGCACAAAGTGTCCATTCAGAGCGATGGATAAAAAAATACTTCTGGCACATTTACAACAACACCAGCCTATGCCAAATTGTATATACAAATGTTACTTCTGTCCTTTCTTCGTCAAAGAAGAACAAGAATTGATTCAACATCTATTACTTCATGGAGTCACTGAACCAGAGGAATACATTGGAAAAACAATGGAATGTAGGTCGCCGCTGCCTGAAGCGCTAGGATCTACTGGTACACCTAATACATCGTCTACTAAACGCCACAGATGTACGGAATGTCCATATGAAACCAACAGTAAGTCACAATTTATGTATCACGAGCAATTCCACCGCCTTCCGGCAGATACTCCTTATAAATGTCCTGAATGTAATTATAGCGTTTCTAAAAGACATTTGCTACATCAACATTTGCGGGTTCATGGTATTATAACAAAGAAAAACGAATCGGAGGCAGAATTAGAAGCAATGGTATCTGCTCCTGGTAAATCGGAGTCAAAGGGAGAATTTTTAATAAATCTCGATGAAATACCCTATGTCTGGGTATCGGCGAAAAATGAATTTCACAAAATGTATAAATGTCGTTACTGTTCATATGTCAATTCCCAGAAGTGTAAAATACCTAATCACGAGAAAATTCATTGTATTATATTTGAAAATACCGAAATTACTGTTTACAAATGCCTAGAATGTAAATTTACTTGCGACAACGCAGCGAGATTGGCAGAACATTCTAAGACGCATGGCGAAATCTATGGCCGTATATATTGCCCCGTAGAATCGGATACATCAGACGACGAACAAATTGCCAAATTACGCAAAGTTATAGAAGCAGAAAAAATTGACACTGACGAAGGAATTCCGAAGGATGAAGGGCCAAGTAATGAAATAAAAGAAGTTAAAGTTTTATACTTTTGTCAAAAATGTCCGTCGAGGTTCTACACAGAGGCTGAATTAAAAACTCACGACAAGTGTCATGAATTTGCGTTTCCAAACAAATGTAAAAGTTGCGAATTTTCTGTTCCTGACGAGAAAGAACTGGTTAGTCATATGGTCGTTCACACAGATGAATACCATACAAAATCTAAAATGCTTAAATTCATGCATCTCTGCCACGCAACACATACGCAACCACCATTAGAACTAGTGCACTGCCCAACAACATCAGATATTACTTGGGTAGTGGCGAGCCCATCAAAGAATAACTTTGATATTGATTGCAATTTTAAAAAAGATTCGAAACATACTCCCAAGCAATTCTTTTGTAAAGAATGTCCAGCAAAGTTCTTTAAAAGTTCTGCACTGACTTATCATATGGGACTGCATGGAAGCGACGGAGAACATAAATGCAAAAAATGCAGTTATGCAGTAAAGAATATTGGAAACCTAGCAAAACACGAATTACTACATGAAACAGAAAACAAAGCTACAAACTGTGATTACGAATCCGGAGATGATATGGATTTTAAAAACATACCGTTATCGGGTACAGATTTGTTCCAAAGGAAGACTGAGGCTCAAAAACGTGTGCTGACTGATAAGGATAAATTGGTGAAACCTAACGATCACTTTCCTCCAGTCCTACAAGCCGATCCGCAATTTGGATACTTAATGCACGGTAACCCAGAGTTTATATATCCGACATACCTGAAGAATGGTCGGCAAAAGGAAAAACGCTACAAGTGTCATAAATGCCCTTCTGCCTTTGAAAAACGAGAGCAGTATAAAATTCATTTATCATTACATGGCTCTAAACAAAGGTACAAATGTGAGCTTTGCGATTATTCTGTTAAATACTACGCAAATTACGTTCAACATATGCGGAAACATCAAATGAATGATGAAGCTCAAGCTGAAAGAAAAAAAGGAAGTAATGGATTCACTGAAACAGAGTCACATGAAAATAAACAAGATGACATTGGTGATAATATAAAACTGGCAATTAAAACTATGCCTAGAGGAGCAGCTAAAAGTGATTTCCAGCAATTCTCAATAAGTGATCAACAGACTCTACGATTACTCCAGCGAAGGCGATCTATTAATAGCTCTGGAATAGATCCAAATCCCACTGAAGCTTCGCCTACAAAGGACCGCAAGCTGCATATGTGCCTCTTGTGCCCATATACCAATCAGCGACAAGATGCTTTAACGAATCATTACAGAAGACACGACGATAGCGATGTTCTTCATGCAGGAAACCACAAATGCTCTCATTGTGATTTAGTTGTAGTGCAATCACATTTCCTTCGAGAACATTTAAAAACACATTTCAATTACCAGAAGACACTAACTGCAGAATGTTATGTTGCTAATGAAAATGTGAGTTTCACCATTACTAAAGTGGATGATGAAAATGTATCTACTGATCTCAAATTAGATATACGAAACAAAAGTCATAAATGTAACGAAGATAAAATTTATGTTAAAATTAAAACAGGCGAACTCTTGGTGGAATGA
Protein Sequence: MLQQMSSPPCAQLGEVAFVVRPFEGRLHGDASSEASSDAAEETELPQCKIRRNYNCTKCTFYTQNPRAFLVHIRDVHLERFKIYDCPNCVYASRHHQKLLRHLKMVHGNQGLTSNIKMESEPSVSETAEPQERMEDLLEEVEECEDVDMDGEDNMDSYYRSGDGDDGQSKQKGDFFSCEKCSYVTHIKSRYTKHVKYHSIPRIKCTICEFRTPYKWNLDRHMRNHGGSGSFSCYMCNFTADIKQSLTAHEMNHHSRPMGQSVVSRGRNQLGAGNMFTSSAPTTLISKEEEGSGDSRSSHSASDMGLQFAEREMITCNSDSNDAAVPAADLQSPLSPNTDGKQSRKIPRPIPQLIPLNASTPNQKMSPGEPPAKKFKDDNTDSNSDNKFETLPPDIVMIPVSSTPTNSKENVVRKKNESFFDKLKERLLTETGKEGSLICKNCGFESKCLSEHSVHEKTCNVQSNRSATNSLLPSLSSTRCQHCRHRCKSSADLYIHMQTCRKNEKRDEQSVEAKNQDGDEATTSNQEKEMEPHPMENVVFVWNNINHDADKFDTPLGININDDSTLPDRIRHFDNEITDENESMNLSPSQAVGKRVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYTKYSKFLAMPVLNEYGENEFHYVDQNASSDPSIVFNDVNDHTGVPYEMQPLNLQTQFGDQKYESLENALSDGKKIKKTLWKCKKCNYKDPSKEALLEHVREHARAEGGIFGGQGLKKPENLPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPENSSNELTSDTCTKCPFRAMDKKILLAHLQQHQPMPNCIYKCYFCPFFVKEEQELIQHLLLHGVTEPEEYIGKTMECRSPLPEALGSTGTPNTSSTKRHRCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKKNESEAELEAMVSAPGKSESKGEFLINLDEIPYVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIIFENTEITVYKCLECKFTCDNAARLAEHSKTHGEIYGRIYCPVESDTSDDEQIAKLRKVIEAEKIDTDEGIPKDEGPSNEIKEVKVLYFCQKCPSRFYTEAELKTHDKCHEFAFPNKCKSCEFSVPDEKELVSHMVVHTDEYHTKSKMLKFMHLCHATHTQPPLELVHCPTTSDITWVVASPSKNNFDIDCNFKKDSKHTPKQFFCKECPAKFFKSSALTYHMGLHGSDGEHKCKKCSYAVKNIGNLAKHELLHETENKATNCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSNGFTETESHENKQDDIGDNIKLAIKTMPRGAAKSDFQQFSISDQQTLRLLQRRRSINSSGIDPNPTEASPTKDRKLHMCLLCPYTNQRQDALTNHYRRHDDSDVLHAGNHKCSHCDLVVVQSHFLREHLKTHFNYQKTLTAECYVANENVSFTITKVDDENVSTDLKLDIRNKSHKCNEDKIYVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00833660;
90% Identity: -
80% Identity: -