Hcos025222.2
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- sip1
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020000499.1:494137-519712[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.1e-30 3.3e-26 93.8 1.9 4 170 370 519 367 524 0.93 2 5 6.8e-05 0.73 10.6 0.2 139 170 524 550 522 558 0.88 3 5 0.1 1.1e+03 0.2 0.0 154 170 597 613 589 620 0.79 4 5 0.1 1.1e+03 0.2 0.0 154 170 671 687 663 694 0.79 5 5 6.7e-25 7.2e-21 76.2 0.2 154 275 745 867 736 867 0.91
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAGGTTATAAGATTTGAAATCACTGACTACGATTTGGACAATGAATTCAATCCAAACAGAACTCGTAGAGCGAAGAAAGAACAGCAGATATATGgtGTATGGGCTAAAGACAGTGACGAAGACGACAATGAAGACAATGTCAGGCAAAGGTCTCGGAAACCTAAGGACTTCTCAGCACCTATCGGATTTGTGGCGGGGGGTGTGCAACAGGCTGGCAAAAAGAAAGAAGAGAAAAAAGaAATAGAATCATCAGCACCATCTGCATCATGGTCAAAGATCACTGCAAACAGTTCAGATGAAGAAGAGCGGCCGTCAATGCCCAATGAGTCAGAAACGGCAGGCATCCGCCGGCAAGGGCAAGGCATGCGCTCGAGTAACCTCGGAGGTAATATGGGCAATTGGGAGAAACATACTAAGGGTATTGGTGCTAAACTGTTACTGCAGATGGGTTACAAACCAGGCAAAGGTCTAGGCAAAGACCTGCAGGGTATATCGGCGCCGGTGGAAGCCACCCTGAGGAAGGGGAGAGGAGCTATTGGTGCATATGGTCCGGAGAAAGCTGCCCTAAAagcaaaaaaagaagaagagcGCCGGCTGAAAGAGAAAGAGGAACAAGAGAAAGGGACAAGCGAGAAGTCGTACAACTGGAAAAAGTCGCACAAGGGACGGTACTTCTACCGAGACTCGGCTGATGTCATACAAGAGGGTAAACCCACCATGCATACTATTACCAGCAACGAGTTGTCCCGCGTGCCCGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGGTACCACGCGCtgcgcgccgccgcgccgcgctTCGAGCACGAGCCGCGCCGCAAGTGCCACAACTTCGCCGCGCCGCAGCTCGCGCACAACCTCGAGGTCATGGTCGACAGCTGCGAGCAGGATATTATCCAAAATGCTCGAGAGCTGCACACAGCGGAAGACGAAATAGTAGTCCTCGAGAGGGACCTAGAAGAGTGCAGCGTGAAGTTGAAGGAGCACGATGACGTCATCGAGAAGGTCGAGAAGATTCTGCACAGGGTCGAGGCTCTTGACAAGCCTGATATATCGCTGGAGACGGCCTATGAAGTATTGGCTGATTTGAAGgAATCACACCCTGTCGAGTACGACATGTTCGGGCTGGGTACCATAGCGGGCGTCATAGTGAGTCCACTGCTAAGTGCTCTATTAGCCACCTGGCAGCCCTTGGAGGCTCCCGAAGAGCCAATACCGACGTTCCTGAAGTGGAAGAAACTCCTTACGGAAGAGGCGTACAACAGTTTGTTATGGCAACACTACGTACCTCATCTGACTACTGCTGCCGAGTTGTGGAATCCCCGCGTGCCGGACGCCATGCTGCGCGCGTTGACCAGCTGGTCGGAGAGTGGAGCGTGTCCGGCGTGGGTGTCGCAGCAGAGCGCCGCGCGCTGCGTGGCGCCGCGGCTACTGACGGCCGTGCGCGGCTGGGACCCCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCCCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGTGAGTACTCTGTCACCGCCGTGCGCGGCTGGGACCACCGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCACGAGCTCGCCGGCGAGGCGCTGGCGCGCTCGGTGTACCCGGTGATCCGGTCGCGGCTGGCGAGCGCGCTGGCGGCCTGGCACCCGGCCGACGGGTCGGCGCGGCCGCTGCTGGCCGCCTGGCGCGCGCCGTGGGGCGCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGCCTGCAGCTGGCGCCGCTCGAGCTCGTCGGCCGCGAGAACACGGCGTGGCTGTGGTGCGTGGACTGGCTGGAGCTGCTGGGCGCGCCCACGGTGGCGGCCGTGGCCTCGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCAACCCCACGCACGCCACCGTGCTCAACTCGTACACTAACTTCAAGAAAATGTTCCCCGAAGAAGTTTTGAAAGAGCCAGCCGTCCGCGACGCATTCCGCAAAGCACTTGACATGATGAATCGAAGCACCGACATTGACTCCGTAGAACCGCCTCCTCCGCCCAGCTTTACAATCGCAGACACGAAAGAATCTACTAAAATCGCTGAAGTTCTGGCATCAGCGAATCAACAGAAGAGCTTCTCGGAGTTGTTAGAATGCCGCTGTATAGAAAAGGGAATAACTTTCGTGCCAATAGCAGGAAAGACCAGGGAAGGTAGACCGCTGTACAAGATCGGCAGTCTACATTGCTATGTGATAAGAAATGTGATTATGTACTCGGATGATGGCGGACGATCGTTTCAACCTATTGCTATGGACAGGTTGCTAAAGATGGTTGAGGATTAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRTRRAKKEQQIYGVWAKDSDEDDNEDNVRQRSRKPKDFSAPIGFVAGGVQQAGKKKEEKKEIESSAPSASWSKITANSSDEEERPSMPNESETAGIRRQGQGMRSSNLGGNMGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKAALKAKKEEERRLKEKEEQEKGTSEKSYNWKKSHKGRYFYRDSADVIQEGKPTMHTITSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCHNFAAPQLAHNLEVMVDSCEQDIIQNARELHTAEDEIVVLERDLEECSVKLKEHDDVIEKVEKILHRVEALDKPDISLETAYEVLADLKESHPVEYDMFGLGTIAGVIVSPLLSALLATWQPLEAPEEPIPTFLKWKKLLTEEAYNSLLWQHYVPHLTTAAELWNPRVPDAMLRALTSWSESGACPAWVSQQSAARCVAPRLLTAVRGWDPTGDTQPLHQWVLPWHELAGEYSVTAVRGWDPTGDTQPLHQWVLPWHELAGEYSVTAVRGWDHRGHAAAAPVGAALARARRSPVSTLSPPCAAGTTGDTQPLHQWVLPWHELAGEYSVTAVRGWDHRGHAAAAPVGAALARARRRCTSGCCPGTSSPVSTLSPPCAAGTTGDTQPLHQWVLPWHELAGEYSVTAVRGWDHRGHAAAAPVGAALARARRRCTSGCCPGTSSPVSTLSPPCAAGTTGDTQPLHQWVLPWHELAGEALARSVYPVIRSRLASALAAWHPADGSARPLLAAWRAPWGAALTAMLHQHIVPKLEHCLQLAPLELVGRENTAWLWCVDWLELLGAPTVAAVASRALLPRWLAALAAWLNTNPTHATVLNSYTNFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDSVEPPPPPSFTIADTKESTKIAEVLASANQQKSFSELLECRCIEKGITFVPIAGKTREGRPLYKIGSLHCYVIRNVIMYSDDGGRSFQPIAMDRLLKMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -