Hgut004109.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypselothyrea guttata
Gene Symbol
L
Assembly
GCA_035045125.1
Location
JAWNNJ010000705.1:28414-39892[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1e-05 0.00073 19.9 2.9 1 23 175 197 175 197 0.98
2 17 0.36 25 5.6 6.2 1 23 203 225 203 225 0.97
3 17 1.7e-07 1.2e-05 25.5 3.2 1 23 231 253 231 253 0.99
4 17 1.3e-05 0.0009 19.6 0.4 1 23 259 281 259 281 0.99
5 17 0.22 16 6.3 0.1 2 23 358 382 357 382 0.89
6 17 0.0011 0.077 13.5 0.2 2 23 402 424 401 424 0.95
7 17 0.072 5.1 7.8 0.7 1 23 500 522 500 522 0.97
8 17 0.019 1.4 9.6 0.1 2 23 530 551 529 551 0.91
9 17 0.0011 0.08 13.5 0.1 1 23 559 584 559 584 0.89
10 17 6.9 4.9e+02 1.6 1.6 2 23 620 642 619 642 0.94
11 17 0.0026 0.18 12.3 1.1 1 23 695 718 695 718 0.97
12 17 0.0016 0.12 13.0 1.8 2 23 897 919 896 919 0.96
13 17 0.12 8.2 7.1 0.1 1 23 925 947 925 947 0.92
14 17 0.56 40 5.0 0.4 2 23 955 976 954 976 0.93
15 17 0.4 29 5.4 1.2 1 23 1072 1094 1072 1094 0.94
16 17 0.015 1.1 9.9 0.0 1 23 1104 1126 1104 1126 0.96
17 17 0.00033 0.023 15.2 1.1 1 23 1131 1153 1131 1153 0.97

Sequence Information

Coding Sequence
ATGATGGCTTTAAAGATGCTTTATCGCGGCCCCAGTTCGCGTTTGgagaatttaatagaaaagaTTCAGGCAACCAAGGAGATCACAAATAACGACATGTACAGCACACACACCTCCTCCAGCTACTCGCCCAGCGTCTCGGATGGCACGCTGACGCCCAACTCTCAGCAGACGCACCCTCAGGTAGGGGCGGCTGGGGAGGAGGAGCCCAAGGCCAACGGGGAGGCCAGCGAGCAGGAGCGGGAGAGGCAGCGGAATAGGGAGACGGCACGGGCAGCGGGCAGCAAGCGACCCGGACATttgcatcatcatcaccatcattatcatcatcagcagGCGCTGAAAATTGCCAACAAGTTGCGGAAAATCAATAAGGATGCCAAGCACACCGGAGGCACTGCAGCGGCAGGCGCTGGAGCAGCGGGGGCAGAGAGGGGAGGCGCTGCAGGAGCTGGCAGCGGAGCAGGCACAAAGTTTGATAAGTTGACAGGCGAGGGCATTAAGACCCGAGGCGATGGCTCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTCGGCTACTTGAAGCATCACGTGCAGAGCCACGCTGAGCATCTGCCTTTCAAGTGCGAATACTGCGCCAAGTTGTTCAAGCACAAGAGATCCCGGGATCGCCATAAGAAACTGCACACCAACGAGCGCAATTACAAGTGTCCACATTGCGAGGCCGCTTTCTCCAGAAGCGATCATCTGAAGATCCACATGAAGACGCACGACATACAGAAGCCCTTCCAGTGCTCGATGTGCAACCGGGGCTACAACACCGCCGCCGCGCTCACCTCGCACATGCAGAAGCACAAGAAGAACGCGGCAATACTGGCAGCGGGTGGCAACCCTAACGCACTGAACTACAGCCCCCGCTCCACCGGCTCCGCCTCCATCTCGAGCAACGGCTCCAAGCGGCGCTACGCGCTGGCCCTGGCCTCCGACAGCAGCCCGAGTCCGCGGCTGGAGTTCCCGAAGCGGGCGAGGAGCAGCGTCCCTACGCCAACTGCGCagccgactgcgctgccgacgccgctgctgcgctgcagcTACTGCCCCAAGGCGACGGAGTTCGGCAGCCTGGAGCAGCTGAACGCGCatctgcagctggcgcacgagcagcagcagcaggcgaggCTCCCGGAGTCGTCTCCAGCCAACGGCTTTCAGCTCAGCTGCGAATACTGCACCATGAGATTCGCGAACATCGCCGGACTGTTCCAGCACATGCGTGCCACGCACCTGGACCGGCTGAGCAGCCCCAACTCCTACTACGAGCACTTCAACCGTCTGGCCACCGCGGGCACCTTCAGTCCGCGCCTGGCGCTGGAGCTGCCCAAGCTGAAGCAGGACGCGCACAGTCCGACCGCAGGGGATGCCCCGAAGCCGGAGCAGGAGCTGCCCACGGATCTGAGCAGCAACAAGCGACGCACGCCCGCCGGAGTCGCCACCGCCCCTCCGGGAGTCTTCTTCTGCAATCAGTGCAACGCTGGCCTGCCGGACTTCGAGAGCTTCCGCCAGCACCTGAAGTCGCACATCGCCGAGGGCATGCAGCTGAGCTGCCCCCACTGCGGCCTCAACCTGCCCGAGCAGAGCGACTACGAGCGCCACGTGGTCGCCCACTTTTTGATTAGCAGCTCCGAGTTCAACTGCAGCgccggcagctgcaacaaatcCTTCGCCAAGTCGGACGAGCTGCAGCAACACCTTGCCGCGGAGCACGTGCAGACGCTGCTCAAGTGCGGCATCTGCGCGGAGCTCTGCGAGAATCGCATGGCCATGCAGCTGCACCTGGCCTGCGCCCACAGCCAGGAGAGCAAGCTGCTCCGCTGCAGCGCCTGCCTGGAGCTGTTCCGCAGCGACACCGACTTCCACGTGCACGTGAAGACGCGTCATcagccagcagctgcaacagcagcagcacttgccacacctgccgctgctgctgcagttgccccTGCGCTGGCCAATCCGCTGCAGTGCATGTTCTGCCGCGTCGTCTGCGCCTCCGAGCTGGAGATGCACTTCCATCTGGCGGCGCACGCGCGGCAGTTCCGCTGCCCCAGCTGCCCGGAGACCTTCCACGTGGAGTTTCTGCTGGACAGGCACATGCAGAGCCAGCATGGCGGGGAGGGGGGTGCAGgcggcgcagctgctgcagaggcggcagctgtgggcgtggctcagAAGGCGCCGCCGTCGCCCAGCATGGGCAGCCTCTATGTGAAcgcgctgctgccgccgctcgccgctgctgccgctgccgccgctgctgccagcaacagcaacaacaacaacaacagcagcaacagcagcagcaacaaccacaacaacaacaacaacagcagcctgCACATCGACTACAACGTGGCCTTCAAGGGCCTCTTTGCCAGcggcgccgccgccgccaagTTCTACAGTCCGCTGCAGGTGGACACCAGCAGCCTGAAGTCGCCGCATCCGGCGCTGATGTACGGCCTGAGCCAGCGCTATCTGATGGAGATGTACGCCGCCAAGGCCAGCTCTCCGGCGGAGGCGCCCGCCCCCAATCCGGCCAGCCTCAGCTGCGGCATGTGCGAGCGCCAGGACCTGCGCAACGAGGCGGAGCTGCACTCGCACCGCAAGCTGGCGCACAATCTGAAGACCGGCGTGAGCCTGAGGTGCGCCTACTGCTCCGGCAACTTCAAGTCGCGTgcggagctggagcagcacaTGAAGAGCTGCCACAACTCGAGCGGCAAGCACAAGTGTCTGATCTGCGACGAGATCTTCCCCTCGCCCGCCATACTCGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGGCAGTCCGGCAAGTGCGCCCACTGCggccagcagctggagcacgTGGCCGCCTTCCGCGCCCATCTGGGGGAGCACGGGGGCGACGGCAGCCTGCCCCTCGCCTGCATCTGCTGCCGCCAGACGCTGCACTCGGAGTTCGAGCTCAGCCTGCACGCCAAGTTCCACACCAAATCCTCCGGCTGCGGCGGCAGCCTCCAGGAGCCCGTCTGCGCCCTCTGCCTGGAGCCGCTGCCAGGTGCCGGTGACACCGCCAAGCTCTGCGAGAAATGCTGCCGCAAGCACAATCTGAACGGCAAGCGTGGCAAGGAGCCGTCTGCAGTCGCCTCCGCTTCCGCCTCCGCTAGCTCCTCCTCCCTGGAGCATCGCTGCAACCTCTGCAAGCTGATTCTGCCCCATGCCCAGAAGCTGCAGGAGCACCTGGTGGAGCACACCTTCGCCGGCACCGAGCAGCGCGGCTTCAACTGCTACATCTGCTCCGCCGTCTTCACCGCCCCCGGCGCCCTGCTCGCCCACATCGCCGAGCACGGCGCCCGCCCCTACGACTGCAGCCTCTGCCCCGAGAAGTTCTACTTCCGAGCCGAGCTGGAGCATCACCAGCGCGCCCACGAGCTGCGCGCCATGCGGCTGCCCAAGCAGGAGACGCGCAGCTCCTCGGCCAGCTCCCCCCTGGCCCCGCTCAGCCCCAGCCACGTCAAGCAGGAGCTCTATGAGCCAGACACGCCCATCTCGCCCAGCCGCCCAGGGgcagcagccacgcccacccaggaggaggaggagtaCATCGAGGTGGAGCAAGTGCCGCAGGAGACGCGCGCGGGGGAGCCACAGATCTCCGCCCACACGGAGCgctccagcagcagcgcctaa
Protein Sequence
MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSVSDGTLTPNSQQTHPQVGAAGEEEPKANGEASEQERERQRNRETARAAGSKRPGHLHHHHHHYHHQQALKIANKLRKINKDAKHTGGTAAAGAGAAGAERGGAAGAGSGAGTKFDKLTGEGIKTRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSKRRYALALASDSSPSPRLEFPKRARSSVPTPTAQPTALPTPLLRCSYCPKATEFGSLEQLNAHLQLAHEQQQQARLPESSPANGFQLSCEYCTMRFANIAGLFQHMRATHLDRLSSPNSYYEHFNRLATAGTFSPRLALELPKLKQDAHSPTAGDAPKPEQELPTDLSSNKRRTPAGVATAPPGVFFCNQCNAGLPDFESFRQHLKSHIAEGMQLSCPHCGLNLPEQSDYERHVVAHFLISSSEFNCSAGSCNKSFAKSDELQQHLAAEHVQTLLKCGICAELCENRMAMQLHLACAHSQESKLLRCSACLELFRSDTDFHVHVKTRHQPAAATAAALATPAAAAAVAPALANPLQCMFCRVVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGEGGAGGAAAAEAAAVGVAQKAPPSPSMGSLYVNALLPPLAAAAAAAAAASNSNNNNNSSNSSSNNHNNNNNSSLHIDYNVAFKGLFASGAAAAKFYSPLQVDTSSLKSPHPALMYGLSQRYLMEMYAAKASSPAEAPAPNPASLSCGMCERQDLRNEAELHSHRKLAHNLKTGVSLRCAYCSGNFKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLGEHGGDGSLPLACICCRQTLHSEFELSLHAKFHTKSSGCGGSLQEPVCALCLEPLPGAGDTAKLCEKCCRKHNLNGKRGKEPSAVASASASASSSSLEHRCNLCKLILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPGALLAHIAEHGARPYDCSLCPEKFYFRAELEHHQRAHELRAMRLPKQETRSSSASSPLAPLSPSHVKQELYEPDTPISPSRPGAAATPTQEEEEYIEVEQVPQETRAGEPQISAHTERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00901678;
90% Identity
-
80% Identity
-