Basic Information

Insect: Hyppa rectilinea
Gene Symbol: -
Assembly: GCA_951799385.1
Location: OX637321.1:12859460-12868637[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.003 0.28 12.7 2.1 2 23 73 94 72 94 0.96

2 12 0.052 4.8 8.8 0.3 2 23 101 123 100 123 0.91

3 12 0.97 90 4.8 0.2 2 23 131 153 130 153 0.89

4 12 3.4e-05 0.0032 18.8 2.0 1 23 159 181 159 181 0.97

5 12 7.4e-08 6.9e-06 27.2 2.2 1 23 187 209 187 209 0.96

6 12 0.0031 0.29 12.6 1.2 1 20 215 234 215 236 0.93

7 12 6.2 5.7e+02 2.3 7.1 3 19 256 272 255 277 0.89

8 12 7.7e-06 0.00072 20.8 1.4 1 23 600 622 600 622 0.98

9 12 7.6e-06 0.0007 20.9 5.2 1 23 629 651 629 652 0.94

10 12 0.035 3.3 9.3 4.5 1 23 660 683 660 683 0.95

11 12 0.0017 0.16 13.4 3.5 1 23 689 713 689 713 0.95

12 12 0.0034 0.31 12.5 1.5 1 21 719 739 719 740 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.003	0.28	12.7	2.1	2	23	73	94	72	94	0.96
2	12	0.052	4.8	8.8	0.3	2	23	101	123	100	123	0.91
3	12	0.97	90	4.8	0.2	2	23	131	153	130	153	0.89
4	12	3.4e-05	0.0032	18.8	2.0	1	23	159	181	159	181	0.97
5	12	7.4e-08	6.9e-06	27.2	2.2	1	23	187	209	187	209	0.96
6	12	0.0031	0.29	12.6	1.2	1	20	215	234	215	236	0.93
7	12	6.2	5.7e+02	2.3	7.1	3	19	256	272	255	277	0.89
8	12	7.7e-06	0.00072	20.8	1.4	1	23	600	622	600	622	0.98
9	12	7.6e-06	0.0007	20.9	5.2	1	23	629	651	629	652	0.94
10	12	0.035	3.3	9.3	4.5	1	23	660	683	660	683	0.95
11	12	0.0017	0.16	13.4	3.5	1	23	689	713	689	713	0.95
12	12	0.0034	0.31	12.5	1.5	1	21	719	739	719	740	0.95

Sequence Information

Coding Sequence: ATGGATTCGAATTTACCATTTTTTAGTCTCCCATTCGTGGATTCGGAGACTTCAGACTTTTTCTCGAGGATCAAGCCGCAGGAGTGTGCCTACGATGAGTTGCACGCGACTTTACCATCCCATGGTGCTTTGTTGGGCCCAGACGATGTCTTGGCCCAGTTTCTCTCTGGAGACGAACCGTTGGAGGAACCCGACTTGAACGGGCCCACGACGTTACACTGTGAGATCTGTAAGAAGCGGTTTGATAATGCTAAGAAGTATTATGGACATTTGAGGGTCCATTCTAAGGATAACCTATGGGTGTGTGAGCAATGTCCAGACCAGAAATTCTCAACCAAGCAGCAGCTGATGAAGCACAGCCTGGCGCACAAGCCTCTGGAGCGAGAGTGGAAGTGTCTCCAGTGCACCATGGCCTTCGAGGCTCTCTGGAAACTACAGCAGCATCTGTTTGCTAAGCATTTGAACTACAAGCCTCACAAGTGTGACCAATGTGACAAGGCTTTCACTAAGGCTTCAGACTTGgataaacataaaacaatacatAGTGATGTAAAGAGACATGCCTGCCCTGAATGCGACATGCGTTTCAAGGATAAGTCGAACCTGAAGCGCCACATGCTGCGACACAGCGGGGACAAGCCTTACTGCTGTACGGGCTGCGGGAACAGGTTCAAGCAGCTGGCTTCCATGAGGCGTCACGCACAAAACTGCACGCTTACCAAGGAGCCTAGCGAGTCTGTGGACAAGGGGCCTCGGAAGAACCACTGCCGCGTTTGTGGCATGTGCTTTCAGTACAAGAGCGGCTTGTTGGAGCATTGTGTCAGGCATCATACCAACACGGGAGGAATTGCGCAAAACACTAAACCGCCCGAACCCGACAAAGAAGAAAAAAGTCATCTCAACGACACAAACCGTATCGTGGACAACATTGTGGACGATATTCTGTCCGCCGAAGACGACTACATGACCATGTCGACACAAAACGAAATACTCAACGTGTACAACCCAAACGATATTGACAATAACCCAGAAAACCTTATGCAAATAGAActattaaaagaaatgaatcAACTACACATTTTAGACGGTGAACTATTCTATAATGACATAGATTTTGACAGCATTCAACCTAGCCACATGTTTAATACCAACACAAATGATATCGATTATGGTACGGATAAAAATGCTGAAATTCTATTCGATTTCACTGAAGGAAGCAAAAGTATGGAACAGGATATTATGAACACTTTGTTTCATGTCAAAGCTGAGTACTTGCCTGATGAACTGCTGAATCCTCCGGAAATTTTGAATCCTCCAGAAAAGACTAACGAACTAGTCAATCATGATTACGTATCAGTAAATGAATGCGCCACTATATTTGAAAGTGATGTCGATTTAGAAGCTAGCACCAACCTTGCTGCGAATCTGAACCAACTCATCGGCGAAAATAGTGTCCAATACATTTCGACAGAGGACGAcgatacatttataataagtttGAATAGCGAAATTGATGCTGAACAGTTGACTGACATGTTAAATATAGGAGTTGAGTTAGTCAATGATAAGGCTAAAGAGCCTAGTGTACCTGAAGTTAAGCAAGAGCCTGTAAGTCTAGCAAATATAGAGCTTTATGTGAAGATTGAAAAGCCAGTAAAACAGCCTCAGAATGAGGAAGACGAGCGCTTACAAAGGTCTATGGTCGTTAAAATTGAAGAGGCGGTCAATGGCCCCCCGATAAGTTTGATGGTCAAAGAAAAGAATGCAGTAAAGAGGAAGCCCAAAAAGAGAGTGTTGTATGTTTGTAGGACATGCAATAAGGTGTTCAATAAGAATGATAATTATAGGTCACATATAGCGACGCATGAGCCGTCCCTTCGCCGCCACGCGTGTAAGATCTGCGGCGAGCGCTTCAGCTACCGCTCGACGCTCAACAAGCACACGCGCAGCCACCACACGCCCTACGTGCCGTCGGAGCATTGCTGTCACATATGTGAGCGGAACTTCGCGTTCGCCTGGATGCTGAAAGATCATTACGAGCGCGACCACGAGCGGCTCACGCCGCATGTATGTGACTATAAGGATTGTCGCAAGAGCTTTTTCAAGAAGTCAGACCTGGCCGTGCACAAGAGGTACCACACTGGAGAGCGCCCATATTCCTGCGACAACTGCAAGCGAGGGTTCCTGCACGCGAGCCATCTGAGGCGCCACGAGCGGGCAGTCTACTGCACCAAGTAG
Protein Sequence: MDSNLPFFSLPFVDSETSDFFSRIKPQECAYDELHATLPSHGALLGPDDVLAQFLSGDEPLEEPDLNGPTTLHCEICKKRFDNAKKYYGHLRVHSKDNLWVCEQCPDQKFSTKQQLMKHSLAHKPLEREWKCLQCTMAFEALWKLQQHLFAKHLNYKPHKCDQCDKAFTKASDLDKHKTIHSDVKRHACPECDMRFKDKSNLKRHMLRHSGDKPYCCTGCGNRFKQLASMRRHAQNCTLTKEPSESVDKGPRKNHCRVCGMCFQYKSGLLEHCVRHHTNTGGIAQNTKPPEPDKEEKSHLNDTNRIVDNIVDDILSAEDDYMTMSTQNEILNVYNPNDIDNNPENLMQIELLKEMNQLHILDGELFYNDIDFDSIQPSHMFNTNTNDIDYGTDKNAEILFDFTEGSKSMEQDIMNTLFHVKAEYLPDELLNPPEILNPPEKTNELVNHDYVSVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDTFIISLNSEIDAEQLTDMLNIGVELVNDKAKEPSVPEVKQEPVSLANIELYVKIEKPVKQPQNEEDERLQRSMVVKIEEAVNGPPISLMVKEKNAVKRKPKKRVLYVCRTCNKVFNKNDNYRSHIATHEPSLRRHACKICGERFSYRSTLNKHTRSHHTPYVPSEHCCHICERNFAFAWMLKDHYERDHERLTPHVCDYKDCRKSFFKKSDLAVHKRYHTGERPYSCDNCKRGFLHASHLRRHERAVYCTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01527643;
90% Identity: iTF_00071746;
80% Identity: -