Basic Information

Insect: Hyppa rectilinea
Gene Symbol: -
Assembly: GCA_951799385.1
Location: OX637327.1:6405086-6406969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.074 6.9 8.3 0.9 1 23 62 84 62 84 0.95

2 15 0.14 13 7.4 0.0 2 23 112 134 111 134 0.89

3 15 0.00016 0.015 16.7 0.7 2 23 155 177 154 177 0.96

4 15 0.00032 0.03 15.7 3.2 1 23 182 204 182 205 0.96

5 15 3.1e-05 0.0029 18.9 0.9 1 23 209 232 209 232 0.94

6 15 0.081 7.5 8.2 0.3 2 23 235 257 234 257 0.95

7 15 0.017 1.6 10.3 0.1 2 19 263 280 262 283 0.94

8 15 0.0021 0.19 13.2 2.7 2 23 331 353 330 353 0.94

9 15 0.0021 0.2 13.2 0.0 1 23 426 449 426 449 0.92

10 15 5.5e-05 0.0051 18.1 0.9 1 23 454 477 454 477 0.94

11 15 4.2e-05 0.0039 18.5 0.5 1 23 483 506 483 506 0.96

12 15 0.00026 0.024 16.1 0.7 2 23 512 534 511 534 0.97

13 15 0.00062 0.058 14.8 4.6 1 23 538 561 538 561 0.97

14 15 0.011 0.98 11.0 0.3 2 23 568 589 567 589 0.96

15 15 0.012 1.1 10.8 1.5 1 23 595 617 595 617 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.074	6.9	8.3	0.9	1	23	62	84	62	84	0.95
2	15	0.14	13	7.4	0.0	2	23	112	134	111	134	0.89
3	15	0.00016	0.015	16.7	0.7	2	23	155	177	154	177	0.96
4	15	0.00032	0.03	15.7	3.2	1	23	182	204	182	205	0.96
5	15	3.1e-05	0.0029	18.9	0.9	1	23	209	232	209	232	0.94
6	15	0.081	7.5	8.2	0.3	2	23	235	257	234	257	0.95
7	15	0.017	1.6	10.3	0.1	2	19	263	280	262	283	0.94
8	15	0.0021	0.19	13.2	2.7	2	23	331	353	330	353	0.94
9	15	0.0021	0.2	13.2	0.0	1	23	426	449	426	449	0.92
10	15	5.5e-05	0.0051	18.1	0.9	1	23	454	477	454	477	0.94
11	15	4.2e-05	0.0039	18.5	0.5	1	23	483	506	483	506	0.96
12	15	0.00026	0.024	16.1	0.7	2	23	512	534	511	534	0.97
13	15	0.00062	0.058	14.8	4.6	1	23	538	561	538	561	0.97
14	15	0.011	0.98	11.0	0.3	2	23	568	589	567	589	0.96
15	15	0.012	1.1	10.8	1.5	1	23	595	617	595	617	0.96

Sequence Information

Coding Sequence: ATGAACACAAACTACGCCATCCCTCCATGCACTGTCTTTGGTATCTCAAAAGTACAAAAAAGTAATTTCTTTTCAGATTTGGAAACAGAGGTGACAAAGCACAGTGCTAGTTATCTAAGGAGGAGAAATCTGCAAATATTACTCAACAACACAACATTGATACCTTTTAAATGGCGCGGCAAATACCTCTGCTTTTATTGCGGGGACGATACGAAGACGCCCGATCGTCTCCGGAAACACACGAAAGGCCACGGCCCTTGCAATGATAGCGACAGAGCTATAAGGCTAGTTAAATCAGCCGATATGGAAATCAAAATAGACGTTTCCGATGTCTCCTGCGAGATTTGCTCAGAAAGTTTCCCGTTTTTGGACGAAATTATTGACCATTTGATATTTAATCACCAACTGCCTTATGCTAAAGATGTAGAGATGCTGCTATCTCCCTACAGACTGTTAGATCTTCAATGCCTCCTCTGCGATAAATCCTTCAATTTCTTACGTAAATTAATCAGCCATATGAATATTTCTCATCCAAATAACAGCTTTGAGTGTGCCAACTGTAAAAAGAACTTTAATAAAAAGAGGGATTTGGATTCGCACATACGACTCCATCATAGAAAATACCATTCCTGTACTAAATGCGATGAAACGTTCCCATCTAACTCCGCGTTACAGATTCATAGGTCAAACGCTCATTCTTCGACTTGTAACATCTGCTTCCAAGTATTTGCGTCGGACGGCAAGCGGTTAGCGCATCAGAAATCTGACCATGATTCTAATCACACCCAATGcggattttgcaataaagttctaACAACAAAACAAGCGTTTATAAGACATGCTGCCAATTGCGAACTTAAACCGCAAGAAGAAACAATCATAGTTGATGACGAAGACAAAAAGATGTCCGTTAAGGAAATAAGAAAAAGCTTAGCATGCATCTTTAATATGACCACCGCTCTACCTTTTAAATTCTTTATGAATAGGTTACGATGTTTCTATTGCACGAAAGATTTCACCTCTTGCGAGGATTTAAAAGAACACACAACCATAGAACATCCTCATTGCGATATATCCTTTAAATCCATGCGGTTAAGGAACAGATATGACGGTGTCCAAATCAAAGTTGATATTTCGTCTCTGTCTTGTAGACTGTGCCAAGTTAGCTTGCAGGATTTGAACGATGTTATTGACCATTTGAGCAAAGAGCATAAAGTGAAATGCGACTTTTCTGTCGAGAGTAATCTGCAGCCGTTCAAATTGATTAAAGACAACTATCCTTGCCCGATTTGCGGTGAAGTCTACAGATATTTTGGTGTTTTACTCAAGCACGTCAGTGCGTCGCATAGCGGCAATAAACATATATGCATGTATTGCGGCAAGGCGTTCAGAACGGACCCTAATCTTAGAGCTCATGTGTCTAGGCGACATAAAATCGCTGAAAACCATAAGTGCGGAAACTGCGATCTCGTTTTTGGCACTAATAGTGCGTTAAGAAATCATCAAGGTACCGTTCACGGTACAAAAATAGTTCAATGCTTCGAATGCTCTGAAAAATTCATCTCACAATATTCAATGCAACGGCACTTGATCACGTCCCATGGTACGGGACATAAGTGCACTTACTGTGATAAACTTTTCACTAAAAACTCTTTTATGATCAACCATGTAAGGAGGTCtcatttgaaagaaaaaaatgtagaATGTCCTGTGTGTCTAGAGAAATTTTTTGACAGCCAGAGGCTGAAAATGCATATGGTTAAACACGTTGGAGAAAGAAACTTCCATTGTGATATTTGTGGGAAAAAGTTCTTGTGGAAAAGGAACCTGAGGGGTCATATGGCCTCCCACATTCGAAATGCAAACGCTCGAAATGTTACCTAa
Protein Sequence: MNTNYAIPPCTVFGISKVQKSNFFSDLETEVTKHSASYLRRRNLQILLNNTTLIPFKWRGKYLCFYCGDDTKTPDRLRKHTKGHGPCNDSDRAIRLVKSADMEIKIDVSDVSCEICSESFPFLDEIIDHLIFNHQLPYAKDVEMLLSPYRLLDLQCLLCDKSFNFLRKLISHMNISHPNNSFECANCKKNFNKKRDLDSHIRLHHRKYHSCTKCDETFPSNSALQIHRSNAHSSTCNICFQVFASDGKRLAHQKSDHDSNHTQCGFCNKVLTTKQAFIRHAANCELKPQEETIIVDDEDKKMSVKEIRKSLACIFNMTTALPFKFFMNRLRCFYCTKDFTSCEDLKEHTTIEHPHCDISFKSMRLRNRYDGVQIKVDISSLSCRLCQVSLQDLNDVIDHLSKEHKVKCDFSVESNLQPFKLIKDNYPCPICGEVYRYFGVLLKHVSASHSGNKHICMYCGKAFRTDPNLRAHVSRRHKIAENHKCGNCDLVFGTNSALRNHQGTVHGTKIVQCFECSEKFISQYSMQRHLITSHGTGHKCTYCDKLFTKNSFMINHVRRSHLKEKNVECPVCLEKFFDSQRLKMHMVKHVGERNFHCDICGKKFLWKRNLRGHMASHIRNANARNVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00712188;
90% Identity: iTF_00758476;
80% Identity: -