Hdol015649.2
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- bab1
- Assembly
- GCA_963921915.1
- Location
- OY998138.1:5274710-5279220[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.2e-14 53.8 0.0 1 43 43 86 43 88 0.95 2 2 3.7 2.3e+03 -1.5 1.1 6 15 163 172 161 176 0.89
Sequence Information
- Coding Sequence
- atGTTCAACGACCATTCAGACAGTTATCAGTATCAACTACAATCCCTGTGGCAAAAATGTTGGAACACCAATTCTGGACTTGTTCACAATCTACGGTTTCGCGAACGAGGACCACTCAAATCATGGCGACCCGAAACCATGGCCGAAGCGATCTTCAGCGTCCTCAAGGAGGGACTTTCTCTCAGCCAAGCTGCCAGGAAGTACGACATCCCGTATCCGACTTTCGTACTGTACGCGAACCGAGTGCACAACATGCTCGGTCCAAGCGCCGATGGCGGGGCCGGTGAGTATCTTCGACCGAAGGGTCGTGGGAGACCACAAAGGATTCTACTCGGCGTTTGGCCCGATGAACACATACGCGGCGTCATAAGGACCGTCGTGTTTCGCGATGGCAACATCAAGGAAGAACCAACACCGATTTATCCCAGCCTGACGAATTACGCTTGCAACGGTCCCGAGGGTGCGGTCAGTCCCGGTGCCGCAGCCGCTGCTGCGGTCGCCGCGGTCGCTCAAGGTCTCCGGCATCAAATGTGCAGTATGGTGGCAGCTGCCCAGTCGCACCAGCACGACATGATAGCGACGAATTTATCAGCAAATTTCCAAACAGCAGTGCAAGTGAGTCAGCATCATTTGAACAACAATAGTCCTCcgagcagcaacaacaacaacaacagcagtagcaacaataacaacaacaacaacaacaacaacaatagcAACAGTAACAACAGAAATTCGCCATTGATGTTGGGACTGCCGAGTCCAGGATCGGGCGGTCCACCGGAGAGTCCGATCGAAGGAAGTCCATTGGCAAGTCCATTGGCGCCATTGATGGATCCGGCGCACATACCGAGCAGCGTGGAAGTGGGAATCGGGGTTAGCGGAATGACCTACAAGCCCAATCGAAGTTTCATAAGTCCGAGGCCGGACAATATTTTCCAAGAGGATATTTCCGACCTGGTGAAAAGCGCGCATTCCCACAAGGACAAGGACAAAATTCCAGTGAAACTCGAGCCATTGGGCGAGTCACGAAgcgagcaataa
- Protein Sequence
- MFNDHSDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRTVVFRDGNIKEEPTPIYPSLTNYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQTAVQVSQHHLNNNSPPSSNNNNNSSSNNNNNNNNNNNSNSNNRNSPLMLGLPSPGSGGPPESPIEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPNRSFISPRPDNIFQEDISDLVKSAHSHKDKDKIPVKLEPLGESRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057558;
- 90% Identity
- iTF_01057558;
- 80% Identity
- -